FFCP PHASE1:Hg19::chr5:88179308..88179319,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4208|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6996|TSSclassifier=S|UniProt=D6RAH2|association_with_transcript=-6bp_to_ENST00000504921,uc003kjj.2,uc003kjk.2_5end|coexpression_cluster_id=C10|description=CAGE_peak_12_at_MEF2C_5end|id=chr5:88179308..88179319,-|ontology_enrichment_celltype=CL:0000945!2.35e-11!24;CL:0000826!2.35e-11!24;CL:0000236!1.31e-08!14|ontology_enrichment_celltype_v019=CL:0000236;1.13e-07;13|ontology_enrichment_celltype_v019_2=CL:0000236,4.22e-07,14|ontology_enrichment_development_v019=UBERON:0006601;3.12e-11;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002780!2.58e-29!41;UBERON:0001890!2.58e-29!41;UBERON:0006240!2.58e-29!41;UBERON:0003080!2.76e-28!42;UBERON:0001869!2.17e-26!32;UBERON:0001049!3.52e-26!57;UBERON:0005068!3.52e-26!57;UBERON:0006241!3.52e-26!57;UBERON:0007135!3.52e-26!57;UBERON:0001893!8.56e-26!34;UBERON:0002791!9.60e-25!33;UBERON:0007023!1.68e-24!115;UBERON:0002619!3.14e-24!22;UBERON:0001017!4.67e-24!82;UBERON:0002020!1.47e-23!34;UBERON:0003528!1.47e-23!34;UBERON:0000955!4.19e-23!69;UBERON:0006238!4.19e-23!69;UBERON:0005743!5.35e-23!86;UBERON:0001950!3.48e-22!20;UBERON:0000956!6.80e-22!25;UBERON:0000203!6.80e-22!25;UBERON:0002616!7.25e-22!59;UBERON:0000073!8.03e-22!94;UBERON:0001016!8.03e-22!94;UBERON:0003056!4.58e-20!61;UBERON:0003075!4.82e-19!86;UBERON:0007284!4.82e-19!86;UBERON:0002346!1.56e-18!90;UBERON:0000033!2.23e-11!123;UBERON:0000153!3.17e-11!129;UBERON:0007811!3.17e-11!129;UBERON:0004121!1.51e-09!169;UBERON:0000924!1.69e-09!173;UBERON:0006601!1.69e-09!173;UBERON:0000200!4.54e-08!6;UBERON:0001871!7.06e-08!7;UBERON:0002021!3.29e-07!5;UBERON:0001872!3.98e-07!5;UBERON:0000349!7.06e-07!5|ontology_enrichment_uberon_v019=UBERON:0002619;4.83e-86;22!UBERON:0001950;2.71e-78;20!UBERON:0000956;1.76e-75;25!UBERON:0000203;1.76e-75;25!UBERON:0001869;3.71e-68;32!UBERON:0001893;5.15e-62;34!UBERON:0002791;5.72e-62;32!UBERON:0003528;6.75e-58;34!UBERON:0002020;6.75e-58;34!UBERON:0002780;1.97e-48;41!UBERON:0001890;1.97e-48;41!UBERON:0000073;1.39e-28;53!UBERON:0002616;1.39e-28;53!UBERON:0000200;3.54e-25;6!UBERON:0002021;3.03e-22;5!UBERON:0001871;5.00e-22;6!UBERON:0001872;1.01e-21;5!UBERON:0000349;4.88e-21;5!UBERON:0000955;1.91e-20;68!UBERON:0001017;2.67e-17;75!UBERON:0001016;2.33e-15;83!UBERON:0001870;3.27e-13;3!UBERON:0002771;8.60e-10;2!UBERON:0001876;1.44e-09;2!UBERON:0001954;2.85e-09;2!UBERON:0002702;2.85e-09;2!UBERON:0003022;2.85e-09;2!UBERON:0002421;2.85e-09;2!UBERON:0002600;2.85e-09;2!UBERON:0007023;2.25e-08;114!UBERON:0002420;1.18e-07;9!UBERON:0007245;1.18e-07;9!UBERON:0010009;1.18e-07;9!UBERON:0010011;1.18e-07;9!UBERON:0000454;1.18e-07;9!UBERON:0011216;9.19e-07;132|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.49e-86,22;UBERON:0001950,9.24e-79,20;UBERON:0001869,4.79e-76,32;UBERON:0000956,9.78e-76,25;UBERON:0000203,9.78e-76,25;UBERON:0001893,2.39e-71,34;UBERON:0002791,6.76e-70,32;UBERON:0002780,2.87e-68,41;UBERON:0001890,2.87e-68,41;UBERON:0003080,2.87e-68,41;UBERON:0006240,2.87e-68,41;UBERON:0003528,1.46e-65,34;UBERON:0002020,1.46e-65,34;UBERON:0000073,1.25e-51,53;UBERON:0002616,1.25e-51,53;UBERON:0001049,1.45e-48,56;UBERON:0005068,1.45e-48,56;UBERON:0006241,1.45e-48,56;UBERON:0007135,1.45e-48,56;UBERON:0003056,1.30e-47,61;UBERON:0001017,8.45e-46,81;UBERON:0000955,4.94e-45,68;UBERON:0006238,4.94e-45,68;UBERON:0001016,2.25e-43,89;UBERON:0002346,1.74e-34,86;UBERON:0003075,7.53e-34,82;UBERON:0007284,7.53e-34,82;UBERON:0010371,2.42e-25,104;UBERON:0000200,2.88e-25,6;UBERON:0001871,2.85e-22,6;UBERON:0002021,3.86e-22,5;UBERON:0001872,7.70e-22,5;UBERON:0000349,6.18e-21,5;UBERON:0007023,8.03e-21,114;UBERON:0004121,9.52e-21,171;UBERON:0000924,9.52e-21,171;UBERON:0006601,9.52e-21,171;UBERON:0010314,2.99e-20,132;UBERON:0011216,1.53e-16,223;UBERON:0001870,1.93e-13,3;UBERON:0002771,6.63e-10,2;UBERON:0000025,8.03e-10,192;UBERON:0001876,9.81e-10,2;UBERON:0002702,2.13e-09,2;UBERON:0001954,4.35e-09,2;UBERON:0003022,4.35e-09,2;UBERON:0002421,4.35e-09,2;UBERON:0002600,4.35e-09,2;UBERON:0002420,9.51e-08,9;UBERON:0007245,9.51e-08,9;UBERON:0010009,9.51e-08,9;UBERON:0010011,9.51e-08,9;UBERON:0000454,9.51e-08,9|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.229240217243854,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0.154934401160603,0,0.293600439334847,0,0,0,0,0.32389366601898,0.257575567634187,0,0,0,0.232429036905685,0,0,0,0,0.47296445977717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502497330513487,0,0.217188844705117,0,0,0,0,0.212604299965044,0,0.22465726229299,0,0.16072558669708,0,0.19891667719909,0,3.51992488922645,0,0.889509253863555,1.28019066769952,0.800791974072025,0.574752439954483,1.32208974556972,0.954053754535364,1.1384259382189,1.76171156811282,0.382273228125229,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4208 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6996 | |||
|TSSclassifier=S | |||
|UniProt=D6RAH2 | |||
|association_with_transcript=-6bp_to_ENST00000504921,uc003kjj.2,uc003kjk.2_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_12_at_MEF2C_5end | |||
|id=chr5:88179308..88179319,- | |||
|ontology_enrichment_celltype=CL:0000945!2.35e-11!24;CL:0000826!2.35e-11!24;CL:0000236!1.31e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.13e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,4.22e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.12e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p12@MEF2C | |||
}} |
Revision as of 16:49, 13 September 2013
Short description: | p12@MEF2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_MEF2C_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -6bp_to_ENST00000504921, uc003kjj.2, uc003kjk.2_5end |
EntrezGene: | MEF2C |
HGNC: | 6996 |
UniProt: | D6RAH2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 4.22e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.