FFCP PHASE1:Mm9::chr18:82754517..82754531,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=270|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:82754517..82754531,+|id=chr18:82754517..82754531,+|ontology_enrichment_celltype=CL:0002614!1.15e-07!3;CL:0000117!1.47e-07!23;CL:0000337!1.47e-07!23;CL:0002610!2.57e-07!3;CL:0000221!6.55e-07!44;CL:0000133!6.55e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,3.50e-14,23;CL:0000337,3.50e-14,23;CL:0002614,2.82e-12,3;CL:0002610,1.15e-11,3;CL:0000540,2.42e-09,33;CL:0000047,2.42e-09,33;CL:0000031,2.42e-09,33;CL:0000404,2.42e-09,33;CL:0002611,2.46e-08,2;CL:0002319,3.46e-08,43;CL:0000221,5.90e-08,44;CL:0000133,5.90e-08,44;CL:0000393,1.24e-07,39;CL:0000211,1.24e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.30e-25!75;UBERON:0001016!5.30e-25!75;UBERON:0001017!1.02e-22!73;UBERON:0005743!1.02e-22!73;UBERON:0004121!2.94e-22!102;UBERON:0000924!2.94e-22!102;UBERON:0006601!2.94e-22!102;UBERON:0001049!3.93e-22!52;UBERON:0005068!3.93e-22!52;UBERON:0006241!3.93e-22!52;UBERON:0007135!3.93e-22!52;UBERON:0000955!3.91e-21!50;UBERON:0006238!3.91e-21!50;UBERON:0002616!5.79e-20!49;UBERON:0000033!3.09e-18!63;UBERON:0002346!6.60e-17!71;UBERON:0003075!6.60e-17!71;UBERON:0007284!6.60e-17!71;UBERON:0002020!9.88e-17!34;UBERON:0002021!6.84e-14!10;UBERON:0000411!6.84e-14!10;UBERON:0001950!6.84e-14!10;UBERON:0002298!4.12e-13!6;UBERON:0003076!8.75e-13!12;UBERON:0003057!8.75e-13!12;UBERON:0002791!6.95e-12!29;UBERON:0003528!6.95e-12!29;UBERON:0001893!6.95e-12!29;UBERON:0003080!7.85e-12!40;UBERON:0007811!2.07e-11!86;UBERON:0002780!1.05e-10!39;UBERON:0001890!1.05e-10!39;UBERON:0006240!1.05e-10!39;UBERON:0003056!5.07e-10!49;UBERON:0000153!7.78e-10!94;UBERON:0002950!2.23e-09!4;UBERON:0001891!2.23e-09!4;UBERON:0009616!2.23e-09!4;UBERON:0002619!3.37e-09!17;UBERON:0002240!8.04e-09!6;UBERON:0005174!8.04e-09!6;UBERON:0001137!8.04e-09!6;UBERON:0000956!1.32e-08!21;UBERON:0001869!1.32e-08!21;UBERON:0000203!1.32e-08!21;UBERON:0002038!1.15e-07!3;UBERON:0002308!1.15e-07!3;UBERON:0009663!1.15e-07!3;UBERON:0009661!1.15e-07!3;UBERON:0006331!1.15e-07!3;UBERON:0000125!1.15e-07!3;UBERON:0004111!2.04e-07!122;UBERON:0004684!2.57e-07!3;UBERON:0002275!2.57e-07!3;UBERON:0000025!5.35e-07!114;UBERON:0001948!6.04e-07!5;UBERON:0002315!6.04e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.39e-27,54;UBERON:0001017,1.05e-23,73;UBERON:0001049,3.18e-23,52;UBERON:0005068,3.18e-23,52;UBERON:0006241,3.18e-23,52;UBERON:0007135,3.18e-23,52;UBERON:0001016,5.79e-23,75;UBERON:0002346,3.72e-20,64;UBERON:0003075,3.72e-20,64;UBERON:0007284,3.72e-20,64;UBERON:0004121,6.42e-19,95;UBERON:0000924,6.42e-19,95;UBERON:0006601,6.42e-19,95;UBERON:0003076,8.32e-18,12;UBERON:0003057,8.32e-18,12;UBERON:0010371,3.44e-17,73;UBERON:0002950,2.84e-15,4;UBERON:0001891,2.84e-15,4;UBERON:0009616,2.84e-15,4;UBERON:0010286,2.84e-15,4;UBERON:0002020,9.15e-15,34;UBERON:0002240,1.27e-14,6;UBERON:0005174,1.27e-14,6;UBERON:0001137,1.27e-14,6;UBERON:0002616,3.75e-14,46;UBERON:0000955,8.65e-14,47;UBERON:0006238,8.65e-14,47;UBERON:0010314,7.99e-13,92;UBERON:0002038,2.82e-12,3;UBERON:0009663,2.82e-12,3;UBERON:0009661,2.82e-12,3;UBERON:0000125,2.82e-12,3;UBERON:0002308,2.82e-12,3;UBERON:0004684,1.15e-11,3;UBERON:0002275,1.15e-11,3;UBERON:0001948,2.51e-11,5;UBERON:0002315,2.51e-11,5;UBERON:0003080,2.91e-10,40;UBERON:0003056,2.11e-09,49;UBERON:0002780,8.12e-09,39;UBERON:0001890,8.12e-09,39;UBERON:0006240,8.12e-09,39;UBERON:0000025,1.64e-08,114;UBERON:0002256,2.46e-08,2;UBERON:0003528,3.00e-08,29;UBERON:0002791,3.00e-08,29;UBERON:0001893,3.00e-08,29;UBERON:0001896,3.41e-08,2;UBERON:0002298,3.41e-08,2;UBERON:0005290,3.41e-08,2;UBERON:0010096,3.41e-08,2;UBERON:0002021,6.63e-08,10;UBERON:0000411,6.63e-08,10;UBERON:0001950,6.63e-08,10;UBERON:0002420,1.04e-07,8;UBERON:0007245,1.04e-07,8;UBERON:0010009,1.04e-07,8;UBERON:0010011,1.04e-07,8;UBERON:0000454,1.04e-07,8;UBERON:0004111,1.07e-07,122|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49800055259202,0.384218305321555,0,0,0,7.14127461009509,6.40518768759679,0,0,0,7.70811166995721,6.76742891851495,5.9906547969935,0,0,0,16.7509799400829,11.8180148106653,8.40390362772456,1.76777151284201,1.28134512719193,0,0.530083353332288,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.878342391034642,3.35114730901528,0,0,0,0,1.9472783122627,3.66000482254901,0,0.869121600961382,1.53429274398198,5.40248915854856,3.73154905055843,0,0,0,0,0,0,0,0,0,0,0,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292399974850665,0,0,0.841159794256509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49541651965817,6.91548950893999,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120625849856312,0.119372344003136,0,0,8.15871328846243,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,1.12950368523413,1.38097570952153,1.14579102687879,2.23409137046794,0.685082519770642,0.755393897389701,1.35004500046361,0,0.906284817968409,0.51776031175182,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr18:82754517..82754531,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=270 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:82754517..82754531,+ | |||
|id=chr18:82754517..82754531,+ | |||
|ontology_enrichment_celltype=CL:0002614!1.15e-07!3;CL:0000117!1.47e-07!23;CL:0000337!1.47e-07!23;CL:0002610!2.57e-07!3;CL:0000221!6.55e-07!44;CL:0000133!6.55e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.50e-14,23;CL:0000337,3.50e-14,23;CL:0002614,2.82e-12,3;CL:0002610,1.15e-11,3;CL:0000540,2.42e-09,33;CL:0000047,2.42e-09,33;CL:0000031,2.42e-09,33;CL:0000404,2.42e-09,33;CL:0002611,2.46e-08,2;CL:0002319,3.46e-08,43;CL:0000221,5.90e-08,44;CL:0000133,5.90e-08,44;CL:0000393,1.24e-07,39;CL:0000211,1.24e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.30e-25!75;UBERON:0001016!5.30e-25!75;UBERON:0001017!1.02e-22!73;UBERON:0005743!1.02e-22!73;UBERON:0004121!2.94e-22!102;UBERON:0000924!2.94e-22!102;UBERON:0006601!2.94e-22!102;UBERON:0001049!3.93e-22!52;UBERON:0005068!3.93e-22!52;UBERON:0006241!3.93e-22!52;UBERON:0007135!3.93e-22!52;UBERON:0000955!3.91e-21!50;UBERON:0006238!3.91e-21!50;UBERON:0002616!5.79e-20!49;UBERON:0000033!3.09e-18!63;UBERON:0002346!6.60e-17!71;UBERON:0003075!6.60e-17!71;UBERON:0007284!6.60e-17!71;UBERON:0002020!9.88e-17!34;UBERON:0002021!6.84e-14!10;UBERON:0000411!6.84e-14!10;UBERON:0001950!6.84e-14!10;UBERON:0002298!4.12e-13!6;UBERON:0003076!8.75e-13!12;UBERON:0003057!8.75e-13!12;UBERON:0002791!6.95e-12!29;UBERON:0003528!6.95e-12!29;UBERON:0001893!6.95e-12!29;UBERON:0003080!7.85e-12!40;UBERON:0007811!2.07e-11!86;UBERON:0002780!1.05e-10!39;UBERON:0001890!1.05e-10!39;UBERON:0006240!1.05e-10!39;UBERON:0003056!5.07e-10!49;UBERON:0000153!7.78e-10!94;UBERON:0002950!2.23e-09!4;UBERON:0001891!2.23e-09!4;UBERON:0009616!2.23e-09!4;UBERON:0002619!3.37e-09!17;UBERON:0002240!8.04e-09!6;UBERON:0005174!8.04e-09!6;UBERON:0001137!8.04e-09!6;UBERON:0000956!1.32e-08!21;UBERON:0001869!1.32e-08!21;UBERON:0000203!1.32e-08!21;UBERON:0002038!1.15e-07!3;UBERON:0002308!1.15e-07!3;UBERON:0009663!1.15e-07!3;UBERON:0009661!1.15e-07!3;UBERON:0006331!1.15e-07!3;UBERON:0000125!1.15e-07!3;UBERON:0004111!2.04e-07!122;UBERON:0004684!2.57e-07!3;UBERON:0002275!2.57e-07!3;UBERON:0000025!5.35e-07!114;UBERON:0001948!6.04e-07!5;UBERON:0002315!6.04e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.39e-27,54;UBERON:0001017,1.05e-23,73;UBERON:0001049,3.18e-23,52;UBERON:0005068,3.18e-23,52;UBERON:0006241,3.18e-23,52;UBERON:0007135,3.18e-23,52;UBERON:0001016,5.79e-23,75;UBERON:0002346,3.72e-20,64;UBERON:0003075,3.72e-20,64;UBERON:0007284,3.72e-20,64;UBERON:0004121,6.42e-19,95;UBERON:0000924,6.42e-19,95;UBERON:0006601,6.42e-19,95;UBERON:0003076,8.32e-18,12;UBERON:0003057,8.32e-18,12;UBERON:0010371,3.44e-17,73;UBERON:0002950,2.84e-15,4;UBERON:0001891,2.84e-15,4;UBERON:0009616,2.84e-15,4;UBERON:0010286,2.84e-15,4;UBERON:0002020,9.15e-15,34;UBERON:0002240,1.27e-14,6;UBERON:0005174,1.27e-14,6;UBERON:0001137,1.27e-14,6;UBERON:0002616,3.75e-14,46;UBERON:0000955,8.65e-14,47;UBERON:0006238,8.65e-14,47;UBERON:0010314,7.99e-13,92;UBERON:0002038,2.82e-12,3;UBERON:0009663,2.82e-12,3;UBERON:0009661,2.82e-12,3;UBERON:0000125,2.82e-12,3;UBERON:0002308,2.82e-12,3;UBERON:0004684,1.15e-11,3;UBERON:0002275,1.15e-11,3;UBERON:0001948,2.51e-11,5;UBERON:0002315,2.51e-11,5;UBERON:0003080,2.91e-10,40;UBERON:0003056,2.11e-09,49;UBERON:0002780,8.12e-09,39;UBERON:0001890,8.12e-09,39;UBERON:0006240,8.12e-09,39;UBERON:0000025,1.64e-08,114;UBERON:0002256,2.46e-08,2;UBERON:0003528,3.00e-08,29;UBERON:0002791,3.00e-08,29;UBERON:0001893,3.00e-08,29;UBERON:0001896,3.41e-08,2;UBERON:0002298,3.41e-08,2;UBERON:0005290,3.41e-08,2;UBERON:0010096,3.41e-08,2;UBERON:0002021,6.63e-08,10;UBERON:0000411,6.63e-08,10;UBERON:0001950,6.63e-08,10;UBERON:0002420,1.04e-07,8;UBERON:0007245,1.04e-07,8;UBERON:0010009,1.04e-07,8;UBERON:0010011,1.04e-07,8;UBERON:0000454,1.04e-07,8;UBERON:0004111,1.07e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49800055259202,0.384218305321555,0,0,0,7.14127461009509,6.40518768759679,0,0,0,7.70811166995721,6.76742891851495,5.9906547969935,0,0,0,16.7509799400829,11.8180148106653,8.40390362772456,1.76777151284201,1.28134512719193,0,0.530083353332288,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0.878342391034642,3.35114730901528,0,0,0,0,1.9472783122627,3.66000482254901,0,0.869121600961382,1.53429274398198,5.40248915854856,3.73154905055843,0,0,0,0,0,0,0,0,0,0,0,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292399974850665,0,0,0.841159794256509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49541651965817,6.91548950893999,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120625849856312,0.119372344003136,0,0,8.15871328846243,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,1.12950368523413,1.38097570952153,1.14579102687879,2.23409137046794,0.685082519770642,0.755393897389701,1.35004500046361,0,0.906284817968409,0.51776031175182,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:82754517..82754531,+ | |||
}} |
Revision as of 16:53, 13 September 2013
Short description: | p@chr18:82754517..82754531, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:82754517..82754531, + |
Coexpression cluster: | MCL_coexpression_mm9:270 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.50e-14 | 23 |
neuroblast (sensu Vertebrata) | 3.50e-14 | 23 |
neuron of the substantia nigra | 2.82e-12 | 3 |
raphe nuclei neuron | 1.15e-11 | 3 |
neuron | 2.42e-09 | 33 |
neuronal stem cell | 2.42e-09 | 33 |
neuroblast | 2.42e-09 | 33 |
electrically signaling cell | 2.42e-09 | 33 |
neuron of the dorsal spinal cord | 2.46e-08 | 2 |
neural cell | 3.46e-08 | 43 |
ectodermal cell | 5.90e-08 | 44 |
neurectodermal cell | 5.90e-08 | 44 |
electrically responsive cell | 1.24e-07 | 39 |
electrically active cell | 1.24e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.