FFCP PHASE1:Mm9::chr19:47097877..47097890,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=941|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:47097877..47097890,+|id=chr19:47097877..47097890,+|ontology_enrichment_celltype=CL:0000117!8.12e-24!23;CL:0000337!8.12e-24!23;CL:0000540!1.01e-15!33;CL:0000047!1.01e-15!33;CL:0000031!1.01e-15!33;CL:0000404!1.01e-15!33;CL:0000393!4.38e-12!39;CL:0000211!4.38e-12!39;CL:0002319!2.97e-10!43;CL:0000221!7.48e-10!44;CL:0000133!7.48e-10!44;CL:0000055!8.25e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,9.53e-41,23;CL:0000337,9.53e-41,23;CL:0000540,3.10e-27,33;CL:0000047,3.10e-27,33;CL:0000031,3.10e-27,33;CL:0000404,3.10e-27,33;CL:0000393,1.89e-22,39;CL:0000211,1.89e-22,39;CL:0002319,5.30e-20,43;CL:0000221,1.85e-19,44;CL:0000133,1.85e-19,44;CL:0002613,8.25e-11,3;CL:0002321,8.52e-11,70;CL:0002610,2.11e-10,3;CL:0002612,1.05e-09,3;CL:0000723,1.99e-07,91;CL:0000048,1.99e-07,91;CL:0000034,9.80e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.70e-21!52;UBERON:0005068!1.70e-21!52;UBERON:0006241!1.70e-21!52;UBERON:0007135!1.70e-21!52;UBERON:0002346!2.92e-21!71;UBERON:0003075!2.92e-21!71;UBERON:0007284!2.92e-21!71;UBERON:0001017!1.34e-20!73;UBERON:0005743!1.34e-20!73;UBERON:0002020!3.55e-20!34;UBERON:0000073!1.14e-19!75;UBERON:0001016!1.14e-19!75;UBERON:0002616!9.89e-19!49;UBERON:0000033!1.35e-18!63;UBERON:0000955!3.91e-18!50;UBERON:0006238!3.91e-18!50;UBERON:0004121!8.25e-18!102;UBERON:0000924!8.25e-18!102;UBERON:0006601!8.25e-18!102;UBERON:0003056!5.61e-16!49;UBERON:0002791!4.92e-15!29;UBERON:0003528!4.92e-15!29;UBERON:0001893!4.92e-15!29;UBERON:0003080!1.50e-13!40;UBERON:0002780!1.08e-12!39;UBERON:0001890!1.08e-12!39;UBERON:0006240!1.08e-12!39;UBERON:0007811!2.14e-10!86;UBERON:0002420!7.96e-10!8;UBERON:0007245!7.96e-10!8;UBERON:0010009!7.96e-10!8;UBERON:0010011!7.96e-10!8;UBERON:0000454!7.96e-10!8;UBERON:0003076!3.67e-09!12;UBERON:0003057!3.67e-09!12;UBERON:0000153!1.46e-08!94;UBERON:0002240!5.42e-08!6;UBERON:0005174!5.42e-08!6;UBERON:0001137!5.42e-08!6;UBERON:0000956!9.63e-08!21;UBERON:0001869!9.63e-08!21;UBERON:0000203!9.63e-08!21;UBERON:0002298!3.06e-07!6;UBERON:0001948!6.91e-07!5;UBERON:0002315!6.91e-07!5;UBERON:0000369!8.14e-07!5;UBERON:0002435!8.14e-07!5;UBERON:0000204!8.14e-07!5;UBERON:0010082!8.14e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.19e-25,54;UBERON:0001017,1.46e-23,73;UBERON:0001016,8.41e-23,75;UBERON:0001049,2.25e-21,52;UBERON:0005068,2.25e-21,52;UBERON:0006241,2.25e-21,52;UBERON:0007135,2.25e-21,52;UBERON:0002346,2.81e-20,64;UBERON:0003075,2.81e-20,64;UBERON:0007284,2.81e-20,64;UBERON:0004121,3.59e-20,95;UBERON:0000924,3.59e-20,95;UBERON:0006601,3.59e-20,95;UBERON:0002020,1.70e-19,34;UBERON:0002240,2.00e-17,6;UBERON:0005174,2.00e-17,6;UBERON:0001137,2.00e-17,6;UBERON:0010371,3.34e-17,73;UBERON:0003076,8.21e-15,12;UBERON:0003057,8.21e-15,12;UBERON:0001948,1.04e-14,5;UBERON:0002315,1.04e-14,5;UBERON:0002420,9.22e-14,8;UBERON:0007245,9.22e-14,8;UBERON:0010009,9.22e-14,8;UBERON:0010011,9.22e-14,8;UBERON:0000454,9.22e-14,8;UBERON:0010314,1.10e-12,92;UBERON:0002616,9.37e-12,46;UBERON:0000955,1.94e-11,47;UBERON:0006238,1.94e-11,47;UBERON:0003056,1.03e-10,49;UBERON:0003528,1.09e-10,29;UBERON:0002791,1.09e-10,29;UBERON:0001893,1.09e-10,29;UBERON:0000369,1.91e-10,5;UBERON:0002435,1.91e-10,5;UBERON:0000204,1.91e-10,5;UBERON:0010082,1.91e-10,5;UBERON:0004684,2.11e-10,3;UBERON:0002275,2.11e-10,3;UBERON:0003080,3.14e-10,40;UBERON:0002257,1.05e-09,3;UBERON:0002780,6.18e-09,39;UBERON:0001890,6.18e-09,39;UBERON:0006240,6.18e-09,39;UBERON:0000025,2.20e-07,114;UBERON:0002950,2.58e-07,4;UBERON:0001891,2.58e-07,4;UBERON:0009616,2.58e-07,4;UBERON:0010286,2.58e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,2.64495489636016,0.633831403506179,0,0,0,0,0,0,0,0.725827286159344,2.97013064329719,1.26194976810829,1.14260393761521,1.32521124570968,0.122490799214954,1.43768206527355,0,3.30347642998166,1.65993539510744,1.99688493233117,2.63772575460388,7.41049913179518,3.12548022334056,2.79182999001381,0.56276261003168,1.22238598221448,1.17851434189467,1.70846016958924,1.86399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.922461989024234,0.452167921657868,0,0,0,0,0,0,0,0,0,0.878342391034642,1.25668024088073,0,0,0,0,1.19832511523858,0.457500602818626,1.00523481690292,0.695297280769106,0.511430914660661,1.45451631191692,0,0,0,0,0,0,0.459804208866946,1.26043490863744,1.05493372485001,0.544291993210623,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13195073617213,0,0,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,0.35163505977661,0,0,0,0,0,0,0,0,0,0.876767573733936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42867407006318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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=941 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:47097877..47097890,+ | |||
|id=chr19:47097877..47097890,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.12e-24!23;CL:0000337!8.12e-24!23;CL:0000540!1.01e-15!33;CL:0000047!1.01e-15!33;CL:0000031!1.01e-15!33;CL:0000404!1.01e-15!33;CL:0000393!4.38e-12!39;CL:0000211!4.38e-12!39;CL:0002319!2.97e-10!43;CL:0000221!7.48e-10!44;CL:0000133!7.48e-10!44;CL:0000055!8.25e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.53e-41,23;CL:0000337,9.53e-41,23;CL:0000540,3.10e-27,33;CL:0000047,3.10e-27,33;CL:0000031,3.10e-27,33;CL:0000404,3.10e-27,33;CL:0000393,1.89e-22,39;CL:0000211,1.89e-22,39;CL:0002319,5.30e-20,43;CL:0000221,1.85e-19,44;CL:0000133,1.85e-19,44;CL:0002613,8.25e-11,3;CL:0002321,8.52e-11,70;CL:0002610,2.11e-10,3;CL:0002612,1.05e-09,3;CL:0000723,1.99e-07,91;CL:0000048,1.99e-07,91;CL:0000034,9.80e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.70e-21!52;UBERON:0005068!1.70e-21!52;UBERON:0006241!1.70e-21!52;UBERON:0007135!1.70e-21!52;UBERON:0002346!2.92e-21!71;UBERON:0003075!2.92e-21!71;UBERON:0007284!2.92e-21!71;UBERON:0001017!1.34e-20!73;UBERON:0005743!1.34e-20!73;UBERON:0002020!3.55e-20!34;UBERON:0000073!1.14e-19!75;UBERON:0001016!1.14e-19!75;UBERON:0002616!9.89e-19!49;UBERON:0000033!1.35e-18!63;UBERON:0000955!3.91e-18!50;UBERON:0006238!3.91e-18!50;UBERON:0004121!8.25e-18!102;UBERON:0000924!8.25e-18!102;UBERON:0006601!8.25e-18!102;UBERON:0003056!5.61e-16!49;UBERON:0002791!4.92e-15!29;UBERON:0003528!4.92e-15!29;UBERON:0001893!4.92e-15!29;UBERON:0003080!1.50e-13!40;UBERON:0002780!1.08e-12!39;UBERON:0001890!1.08e-12!39;UBERON:0006240!1.08e-12!39;UBERON:0007811!2.14e-10!86;UBERON:0002420!7.96e-10!8;UBERON:0007245!7.96e-10!8;UBERON:0010009!7.96e-10!8;UBERON:0010011!7.96e-10!8;UBERON:0000454!7.96e-10!8;UBERON:0003076!3.67e-09!12;UBERON:0003057!3.67e-09!12;UBERON:0000153!1.46e-08!94;UBERON:0002240!5.42e-08!6;UBERON:0005174!5.42e-08!6;UBERON:0001137!5.42e-08!6;UBERON:0000956!9.63e-08!21;UBERON:0001869!9.63e-08!21;UBERON:0000203!9.63e-08!21;UBERON:0002298!3.06e-07!6;UBERON:0001948!6.91e-07!5;UBERON:0002315!6.91e-07!5;UBERON:0000369!8.14e-07!5;UBERON:0002435!8.14e-07!5;UBERON:0000204!8.14e-07!5;UBERON:0010082!8.14e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.19e-25,54;UBERON:0001017,1.46e-23,73;UBERON:0001016,8.41e-23,75;UBERON:0001049,2.25e-21,52;UBERON:0005068,2.25e-21,52;UBERON:0006241,2.25e-21,52;UBERON:0007135,2.25e-21,52;UBERON:0002346,2.81e-20,64;UBERON:0003075,2.81e-20,64;UBERON:0007284,2.81e-20,64;UBERON:0004121,3.59e-20,95;UBERON:0000924,3.59e-20,95;UBERON:0006601,3.59e-20,95;UBERON:0002020,1.70e-19,34;UBERON:0002240,2.00e-17,6;UBERON:0005174,2.00e-17,6;UBERON:0001137,2.00e-17,6;UBERON:0010371,3.34e-17,73;UBERON:0003076,8.21e-15,12;UBERON:0003057,8.21e-15,12;UBERON:0001948,1.04e-14,5;UBERON:0002315,1.04e-14,5;UBERON:0002420,9.22e-14,8;UBERON:0007245,9.22e-14,8;UBERON:0010009,9.22e-14,8;UBERON:0010011,9.22e-14,8;UBERON:0000454,9.22e-14,8;UBERON:0010314,1.10e-12,92;UBERON:0002616,9.37e-12,46;UBERON:0000955,1.94e-11,47;UBERON:0006238,1.94e-11,47;UBERON:0003056,1.03e-10,49;UBERON:0003528,1.09e-10,29;UBERON:0002791,1.09e-10,29;UBERON:0001893,1.09e-10,29;UBERON:0000369,1.91e-10,5;UBERON:0002435,1.91e-10,5;UBERON:0000204,1.91e-10,5;UBERON:0010082,1.91e-10,5;UBERON:0004684,2.11e-10,3;UBERON:0002275,2.11e-10,3;UBERON:0003080,3.14e-10,40;UBERON:0002257,1.05e-09,3;UBERON:0002780,6.18e-09,39;UBERON:0001890,6.18e-09,39;UBERON:0006240,6.18e-09,39;UBERON:0000025,2.20e-07,114;UBERON:0002950,2.58e-07,4;UBERON:0001891,2.58e-07,4;UBERON:0009616,2.58e-07,4;UBERON:0010286,2.58e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61853168687678,2.64495489636016,0.633831403506179,0,0,0,0,0,0,0,0.725827286159344,2.97013064329719,1.26194976810829,1.14260393761521,1.32521124570968,0.122490799214954,1.43768206527355,0,3.30347642998166,1.65993539510744,1.99688493233117,2.63772575460388,7.41049913179518,3.12548022334056,2.79182999001381,0.56276261003168,1.22238598221448,1.17851434189467,1.70846016958924,1.86399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.922461989024234,0.452167921657868,0,0,0,0,0,0,0,0,0,0.878342391034642,1.25668024088073,0,0,0,0,1.19832511523858,0.457500602818626,1.00523481690292,0.695297280769106,0.511430914660661,1.45451631191692,0,0,0,0,0,0,0.459804208866946,1.26043490863744,1.05493372485001,0.544291993210623,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13195073617213,0,0,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,0.35163505977661,0,0,0,0,0,0,0,0,0,0.876767573733936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428674070063185,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,1.48340241608408,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0.515559547031063,0.685082519770642,0,0,0.900642406448441,0,1.03552062350364,0.415149390336707,1.19707462020309,0.512200817262403,0,0.419226325255965,0.367687016900028,0.44449345560323,0.412070114477788,0,0.505394423527595,0.760437899670719,0.565879024158229,0.561849044819294,0.128050304809739,0.0574354689556133,0,0.231768651889711,0,0,0.441596760403192,0.342869252385415,0.532427418478012,0,0.290692833264657,0.0941093804153306,0.25384382367503,0,0.526139422875686,0.679020569229309,0.561142271657738,0.355905054372522,0.0985044823755635,0,0,0.192906610981141,1.99848462350357,0.233931608445408,0,0.191288332068843,0,0 | |||
|short_description=p@chr19:47097877..47097890,+ | |||
}} |
Revision as of 17:54, 13 September 2013
Short description: | p@chr19:47097877..47097890, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:47097877..47097890, + |
Coexpression cluster: | MCL_coexpression_mm9:941 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.53e-41 | 23 |
neuroblast (sensu Vertebrata) | 9.53e-41 | 23 |
neuron | 3.10e-27 | 33 |
neuronal stem cell | 3.10e-27 | 33 |
neuroblast | 3.10e-27 | 33 |
electrically signaling cell | 3.10e-27 | 33 |
electrically responsive cell | 1.89e-22 | 39 |
electrically active cell | 1.89e-22 | 39 |
neural cell | 5.30e-20 | 43 |
ectodermal cell | 1.85e-19 | 44 |
neurectodermal cell | 1.85e-19 | 44 |
striatum neuron | 8.25e-11 | 3 |
embryonic cell | 8.52e-11 | 70 |
raphe nuclei neuron | 2.11e-10 | 3 |
neuron of the ventral spinal cord | 1.05e-09 | 3 |
somatic stem cell | 1.99e-07 | 91 |
multi fate stem cell | 1.99e-07 | 91 |
stem cell | 9.80e-07 | 97 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.