FFCP PHASE1:Mm9::chr19:55969635..55969644,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=21416|HGNC=|MCL_coexpression_id=141|UniProt=Q8C834|association_with_transcript=-166bp_to_NM_001142924,uc008hyn.2_5end|description=CAGE_peak_47_at_Tcf7l2_5end|id=chr19:55969635..55969644,+|ontology_enrichment_celltype=CL:0002613!5.53e-08!3;CL:0000120!1.42e-07!3;CL:0002610!1.42e-07!3|ontology_enrichment_celltype_v019_2=CL:0002613,1.56e-38,3;CL:0000117,4.90e-14,23;CL:0000337,4.90e-14,23;CL:0000540,7.02e-10,33;CL:0000047,7.02e-10,33;CL:0000031,7.02e-10,33;CL:0000404,7.02e-10,33;CL:0000393,2.12e-08,39;CL:0000211,2.12e-08,39;CL:0002319,1.22e-07,43;CL:0000221,1.80e-07,44;CL:0000133,1.80e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004684!1.42e-07!3;UBERON:0002275!1.42e-07!3;UBERON:0000014!3.70e-07!5;UBERON:0001003!3.70e-07!5;UBERON:0002097!3.70e-07!5;UBERON:0002199!3.70e-07!5;UBERON:0007029!3.70e-07!5;UBERON:0007376!3.70e-07!5;UBERON:0002416!3.70e-07!5;UBERON:0007383!3.70e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.73e-23,5;UBERON:0002435,1.73e-23,5;UBERON:0000204,1.73e-23,5;UBERON:0010082,1.73e-23,5;UBERON:0002420,5.50e-15,8;UBERON:0007245,5.50e-15,8;UBERON:0010009,5.50e-15,8;UBERON:0010011,5.50e-15,8;UBERON:0000454,5.50e-15,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,3.1739458756322,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.638436690425939,0.614426133024974,2.50583946687368,5.39777097254217,4.68822033501084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748953197024114,0,0,0.173824320192276,0,1.0389402227978,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430846795465598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322928853391811,0.542816324353403,1.07435109602823,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0.243106717068294,0.628839487883947,0,0,0.412070114477788,0,0.252697211763798,0,0,0.0936415074698824,0.256100609619477,0.0574354689556133,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0,0.188218760830661,0.338458431566706,0,0.526139422875686,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0|short_description=p47@Tcf7l2}} | ||
|EntrezGene=21416 | |||
|HGNC= | |||
|MCL_coexpression_id=141 | |||
|UniProt=Q8C834 | |||
|association_with_transcript=-166bp_to_NM_001142924,uc008hyn.2_5end | |||
|description=CAGE_peak_47_at_Tcf7l2_5end | |||
|id=chr19:55969635..55969644,+ | |||
|ontology_enrichment_celltype=CL:0002613!5.53e-08!3;CL:0000120!1.42e-07!3;CL:0002610!1.42e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,1.56e-38,3;CL:0000117,4.90e-14,23;CL:0000337,4.90e-14,23;CL:0000540,7.02e-10,33;CL:0000047,7.02e-10,33;CL:0000031,7.02e-10,33;CL:0000404,7.02e-10,33;CL:0000393,2.12e-08,39;CL:0000211,2.12e-08,39;CL:0002319,1.22e-07,43;CL:0000221,1.80e-07,44;CL:0000133,1.80e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004684!1.42e-07!3;UBERON:0002275!1.42e-07!3;UBERON:0000014!3.70e-07!5;UBERON:0001003!3.70e-07!5;UBERON:0002097!3.70e-07!5;UBERON:0002199!3.70e-07!5;UBERON:0007029!3.70e-07!5;UBERON:0007376!3.70e-07!5;UBERON:0002416!3.70e-07!5;UBERON:0007383!3.70e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.73e-23,5;UBERON:0002435,1.73e-23,5;UBERON:0000204,1.73e-23,5;UBERON:0010082,1.73e-23,5;UBERON:0002420,5.50e-15,8;UBERON:0007245,5.50e-15,8;UBERON:0010009,5.50e-15,8;UBERON:0010011,5.50e-15,8;UBERON:0000454,5.50e-15,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,3.1739458756322,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.638436690425939,0.614426133024974,2.50583946687368,5.39777097254217,4.68822033501084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748953197024114,0,0,0.173824320192276,0,1.0389402227978,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430846795465598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322928853391811,0.542816324353403,1.07435109602823,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0.243106717068294,0.628839487883947,0,0,0.412070114477788,0,0.252697211763798,0,0,0.0936415074698824,0.256100609619477,0.0574354689556133,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0,0.188218760830661,0.338458431566706,0,0.526139422875686,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p47@Tcf7l2 | |||
}} |
Revision as of 18:07, 13 September 2013
Short description: | p47@Tcf7l2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_47_at_Tcf7l2_5end |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | -166bp_to_NM_001142924, uc008hyn.2_5end |
EntrezGene: | Tcf7l2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 1.56e-38 | 3 |
CNS neuron (sensu Vertebrata) | 4.90e-14 | 23 |
neuroblast (sensu Vertebrata) | 4.90e-14 | 23 |
neuron | 7.02e-10 | 33 |
neuronal stem cell | 7.02e-10 | 33 |
neuroblast | 7.02e-10 | 33 |
electrically signaling cell | 7.02e-10 | 33 |
electrically responsive cell | 2.12e-08 | 39 |
electrically active cell | 2.12e-08 | 39 |
neural cell | 1.22e-07 | 43 |
ectodermal cell | 1.80e-07 | 44 |
neurectodermal cell | 1.80e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 1.73e-23 | 5 |
striatum | 1.73e-23 | 5 |
ventral part of telencephalon | 1.73e-23 | 5 |
future corpus striatum | 1.73e-23 | 5 |
basal ganglion | 5.50e-15 | 8 |
nuclear complex of neuraxis | 5.50e-15 | 8 |
aggregate regional part of brain | 5.50e-15 | 8 |
collection of basal ganglia | 5.50e-15 | 8 |
cerebral subcortex | 5.50e-15 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.