FFCP PHASE1:Mm9::chr19:55972431..55972440,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=21416|HGNC=|MCL_coexpression_id=1732|UniProt=|association_with_transcript=-358bp_to_ENSMUST00000143334_5end|description=CAGE_peak_63_at_Tcf7l2_5end|id=chr19:55972431..55972440,+|ontology_enrichment_celltype=CL:0002613!3.14e-13!3;CL:0000120!7.86e-13!3;CL:0000117!2.34e-10!23;CL:0000337!2.34e-10!23;CL:0000540!7.24e-07!33;CL:0000047!7.24e-07!33;CL:0000031!7.24e-07!33;CL:0000404!7.24e-07!33|ontology_enrichment_celltype_v019_2=CL:0002613,1.18e-37,3;CL:0000117,9.15e-14,23;CL:0000337,9.15e-14,23;CL:0000540,1.08e-09,33;CL:0000047,1.08e-09,33;CL:0000031,1.08e-09,33;CL:0000404,1.08e-09,33;CL:0000393,3.06e-08,39;CL:0000211,3.06e-08,39;CL:0002319,1.70e-07,43;CL:0000221,2.49e-07,44;CL:0000133,2.49e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002420!1.99e-08!8;UBERON:0007245!1.99e-08!8;UBERON:0010009!1.99e-08!8;UBERON:0010011!1.99e-08!8;UBERON:0000454!1.99e-08!8;UBERON:0000369!4.12e-08!5;UBERON:0002435!4.12e-08!5;UBERON:0000204!4.12e-08!5;UBERON:0010082!4.12e-08!5;UBERON:0001017!5.13e-07!73;UBERON:0005743!5.13e-07!73;UBERON:0000073!9.13e-07!75;UBERON:0001016!9.13e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0000369,5.81e-23,5;UBERON:0002435,5.81e-23,5;UBERON:0000204,5.81e-23,5;UBERON:0010082,5.81e-23,5;UBERON:0002420,1.17e-14,8;UBERON:0007245,1.17e-14,8;UBERON:0010009,1.17e-14,8;UBERON:0010011,1.17e-14,8;UBERON:0000454,1.17e-14,8;UBERON:0002259,3.62e-14,1;UBERON:0002314,3.62e-14,1;UBERON:0004061,3.62e-14,1;UBERON:0006777,3.62e-14,1;UBERON:0005882,3.62e-14,1;UBERON:0000073,1.40e-08,54;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75;UBERON:0003080,3.65e-08,40;UBERON:0002616,3.97e-07,46;UBERON:0000955,5.58e-07,47;UBERON:0006238,5.58e-07,47|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14918604276669,0,1.05509030184155,1.55528994124096,1.04182674111352,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39665023047716,0,0,0,0,1.87009240103604,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0.294397840268795,0,0.177475806159338,0,0.290692833264657,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p63@Tcf7l2}} | ||
|EntrezGene=21416 | |||
|HGNC= | |||
|MCL_coexpression_id=1732 | |||
|UniProt= | |||
|association_with_transcript=-358bp_to_ENSMUST00000143334_5end | |||
|description=CAGE_peak_63_at_Tcf7l2_5end | |||
|id=chr19:55972431..55972440,+ | |||
|ontology_enrichment_celltype=CL:0002613!3.14e-13!3;CL:0000120!7.86e-13!3;CL:0000117!2.34e-10!23;CL:0000337!2.34e-10!23;CL:0000540!7.24e-07!33;CL:0000047!7.24e-07!33;CL:0000031!7.24e-07!33;CL:0000404!7.24e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,1.18e-37,3;CL:0000117,9.15e-14,23;CL:0000337,9.15e-14,23;CL:0000540,1.08e-09,33;CL:0000047,1.08e-09,33;CL:0000031,1.08e-09,33;CL:0000404,1.08e-09,33;CL:0000393,3.06e-08,39;CL:0000211,3.06e-08,39;CL:0002319,1.70e-07,43;CL:0000221,2.49e-07,44;CL:0000133,2.49e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002420!1.99e-08!8;UBERON:0007245!1.99e-08!8;UBERON:0010009!1.99e-08!8;UBERON:0010011!1.99e-08!8;UBERON:0000454!1.99e-08!8;UBERON:0000369!4.12e-08!5;UBERON:0002435!4.12e-08!5;UBERON:0000204!4.12e-08!5;UBERON:0010082!4.12e-08!5;UBERON:0001017!5.13e-07!73;UBERON:0005743!5.13e-07!73;UBERON:0000073!9.13e-07!75;UBERON:0001016!9.13e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,5.81e-23,5;UBERON:0002435,5.81e-23,5;UBERON:0000204,5.81e-23,5;UBERON:0010082,5.81e-23,5;UBERON:0002420,1.17e-14,8;UBERON:0007245,1.17e-14,8;UBERON:0010009,1.17e-14,8;UBERON:0010011,1.17e-14,8;UBERON:0000454,1.17e-14,8;UBERON:0002259,3.62e-14,1;UBERON:0002314,3.62e-14,1;UBERON:0004061,3.62e-14,1;UBERON:0006777,3.62e-14,1;UBERON:0005882,3.62e-14,1;UBERON:0000073,1.40e-08,54;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75;UBERON:0003080,3.65e-08,40;UBERON:0002616,3.97e-07,46;UBERON:0000955,5.58e-07,47;UBERON:0006238,5.58e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14918604276669,0,1.05509030184155,1.55528994124096,1.04182674111352,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39665023047716,0,0,0,0,1.87009240103604,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0.294397840268795,0,0.177475806159338,0,0.290692833264657,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p63@Tcf7l2 | |||
}} |
Revision as of 18:07, 13 September 2013
Short description: | p63@Tcf7l2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_63_at_Tcf7l2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1732 |
Association with transcript: | -358bp_to_ENSMUST00000143334_5end |
EntrezGene: | Tcf7l2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 1.18e-37 | 3 |
CNS neuron (sensu Vertebrata) | 9.15e-14 | 23 |
neuroblast (sensu Vertebrata) | 9.15e-14 | 23 |
neuron | 1.08e-09 | 33 |
neuronal stem cell | 1.08e-09 | 33 |
neuroblast | 1.08e-09 | 33 |
electrically signaling cell | 1.08e-09 | 33 |
electrically responsive cell | 3.06e-08 | 39 |
electrically active cell | 3.06e-08 | 39 |
neural cell | 1.70e-07 | 43 |
ectodermal cell | 2.49e-07 | 44 |
neurectodermal cell | 2.49e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 5.81e-23 | 5 |
striatum | 5.81e-23 | 5 |
ventral part of telencephalon | 5.81e-23 | 5 |
future corpus striatum | 5.81e-23 | 5 |
basal ganglion | 1.17e-14 | 8 |
nuclear complex of neuraxis | 1.17e-14 | 8 |
aggregate regional part of brain | 1.17e-14 | 8 |
collection of basal ganglia | 1.17e-14 | 8 |
cerebral subcortex | 1.17e-14 | 8 |
corpora quadrigemina | 3.62e-14 | 1 |
midbrain tectum | 3.62e-14 | 1 |
neural tube mantle layer | 3.62e-14 | 1 |
tectal plate | 3.62e-14 | 1 |
neural tube alar plate | 3.62e-14 | 1 |
regional part of nervous system | 1.40e-08 | 54 |
central nervous system | 1.47e-08 | 73 |
nervous system | 2.47e-08 | 75 |
anterior neural tube | 3.65e-08 | 40 |
regional part of brain | 3.97e-07 | 46 |
brain | 5.58e-07 | 47 |
future brain | 5.58e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.