FFCP PHASE1:Hg19::chr6:16762361..16762374,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C578|description=CAGE_peak_at_chr6:16762361..16762374,-|id=chr6:16762361..16762374,-|ontology_enrichment_celltype=CL:0000738!3.86e-40!140;CL:0002087!3.86e-32!119;CL:0000037!1.39e-31!172;CL:0000566!1.39e-31!172;CL:0002031!4.49e-31!124;CL:0000988!1.73e-30!182;CL:0002032!1.19e-26!165;CL:0000837!1.19e-26!165;CL:0000766!1.35e-21!76;CL:0002057!1.35e-21!42;CL:0000860!7.37e-21!45;CL:0000557!4.62e-18!71;CL:0000839!6.23e-16!70;CL:0002009!1.57e-15!65;CL:0002194!4.08e-15!63;CL:0000576!4.08e-15!63;CL:0000040!4.08e-15!63;CL:0000559!4.08e-15!63;CL:0000838!1.65e-14!52;CL:0000542!4.53e-14!53;CL:0000051!4.53e-14!53;CL:0000763!5.13e-13!112;CL:0000049!5.13e-13!112;CL:0000084!3.59e-10!25;CL:0000827!3.59e-10!25;CL:0000134!4.64e-09!358;CL:0000791!1.53e-08!18;CL:0000789!1.53e-08!18;CL:0002420!1.53e-08!18;CL:0002419!1.53e-08!18;CL:0000790!1.53e-08!18;CL:0002320!1.82e-08!365;CL:0000219!1.81e-07!390;CL:0000624!2.67e-07!6;CL:0000094!4.17e-07!8|ontology_enrichment_celltype_v019=CL:0000624;6.65e-25;6!CL:0000791;1.92e-20;18!CL:0000789;1.92e-20;18!CL:0002419;1.92e-20;18!CL:0000623;2.18e-19;3!CL:0000084;4.63e-18;25!CL:0000771;4.67e-13;2!CL:0000542;1.30e-12;53!CL:0000094;6.05e-12;8!CL:0002393;1.89e-09;6!CL:0002397;1.89e-09;6!CL:0000898;6.72e-09;3!CL:0000226;9.58e-09;3!CL:0000842;9.58e-09;3!CL:0000081;1.01e-08;11!CL:0000767;1.44e-08;3!CL:0000895;1.49e-07;1!CL:0000037;2.59e-07;1!CL:0001024;2.59e-07;1!CL:0002032;4.88e-07;1!CL:0000557;4.88e-07;1!CL:0002087;8.82e-07;104|ontology_enrichment_celltype_v019_2=CL:0000624,3.67e-25,6;CL:0000738,4.88e-22,136;CL:0000791,1.45e-20,18;CL:0000789,1.45e-20,18;CL:0002420,1.45e-20,18;CL:0002419,1.45e-20,18;CL:0000790,1.45e-20,18;CL:0000037,2.76e-20,168;CL:0000838,8.61e-20,52;CL:0000623,2.12e-19,3;CL:0000825,2.12e-19,3;CL:0000542,2.31e-19,53;CL:0000051,2.31e-19,53;CL:0000988,5.48e-19,177;CL:0002087,3.34e-18,115;CL:0000084,4.27e-18,25;CL:0000827,4.27e-18,25;CL:0002032,3.38e-16,161;CL:0000837,3.38e-16,161;CL:0002031,8.94e-14,120;CL:0000771,4.15e-13,2;CL:0000094,5.40e-12,8;CL:0000898,5.40e-09,3;CL:0000081,9.34e-09,11;CL:0000226,1.06e-08,3;CL:0000842,1.06e-08,3;CL:0000767,1.34e-08,3;CL:0000810,1.44e-07,1;CL:0000895,1.44e-07,1;CL:0002436,1.44e-07,1;CL:0002427,1.44e-07,1;CL:0002428,1.44e-07,1;CL:0002429,1.44e-07,1;CL:0002433,1.44e-07,1;CL:0002431,1.44e-07,1;CL:0002432,1.44e-07,1;CL:0001024,2.23e-07,1;CL:0000134,8.12e-07,354|ontology_enrichment_development_v019=CL:0000790;1.92e-20;18!CL:0000051;1.30e-12;53!CL:0002427;1.49e-07;1!UBERON:0005425;4.88e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!4.54e-18!102;UBERON:0003061!4.54e-18!102;UBERON:0002371!5.98e-16!80;UBERON:0002193!3.41e-15!112;UBERON:0001474!5.92e-15!86;UBERON:0004765!8.94e-12!101;UBERON:0001434!8.94e-12!101;UBERON:0002405!1.05e-11!115;UBERON:0002384!7.77e-09!375|ontology_enrichment_uberon_v019=UBERON:0000941;4.88e-07;1!UBERON:0001785;4.88e-07;1!UBERON:0002464;4.88e-07;1!UBERON:0004904;4.88e-07;1!UBERON:0001021;4.88e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0000941,4.89e-07,1;UBERON:0001785,4.89e-07,1;UBERON:0002464,4.89e-07,1;UBERON:0004904,4.89e-07,1;UBERON:0001021,4.89e-07,1;UBERON:0003902,4.89e-07,1;UBERON:0005425,4.89e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.0787107813136792,1.96682138424452,1.15148819429164,0.928896739896456,0,0,0,0,0,2.93600439334847,1.66198622559563,2.00544447470142,3.47217393145363,0,0,0,0.145398238779565,0,0.485168122375632,0,0.411167888021826,0,0,0.768482119587302,0.709446689665756,0.689491361473237,0.645484683583826,0,0.376484679085209,0.272906150057846,0.449446968890169,0.612167784741805,0.320929027076094,0.639337125799041,0,0.398927315243264,0.426224750532694,0.870627715885752,1.13477044938228,0.622822248995575,0,0,0.217188844705117,0.605399502633369,0.736555271975129,2.21523671208619,0,0.425208599930087,0.419317291016752,0.22465726229299,0,0,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,1.1384259382189,0.587237189370939,1.52909291250092,14.5388461436928,8.96813700770458,0.526768169550154,1.96709770113833,9.43225830597995,5.34563897398724,0.334372990781356,0,0,0,0.222820913770347,1.76763544484902,0.886135578334485,1.62482318259009,0.128091319725675,0.650296737799391,0,0.276350017785848,1.15921234294021,0,0.267540828089713,0,0.226618685395132,6.89796888483458,2.06176467289578,1.51811815211702,0,0,0,0.150575119077773,0,0,0.236777252044017,0,5.44338206706778,9.36040685242276,6.66192257860875,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0.476981248610684,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.710019185033229,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C578 | |||
|description=CAGE_peak_at_chr6:16762361..16762374,- | |||
|id=chr6:16762361..16762374,- | |||
|ontology_enrichment_celltype=CL:0000738!3.86e-40!140;CL:0002087!3.86e-32!119;CL:0000037!1.39e-31!172;CL:0000566!1.39e-31!172;CL:0002031!4.49e-31!124;CL:0000988!1.73e-30!182;CL:0002032!1.19e-26!165;CL:0000837!1.19e-26!165;CL:0000766!1.35e-21!76;CL:0002057!1.35e-21!42;CL:0000860!7.37e-21!45;CL:0000557!4.62e-18!71;CL:0000839!6.23e-16!70;CL:0002009!1.57e-15!65;CL:0002194!4.08e-15!63;CL:0000576!4.08e-15!63;CL:0000040!4.08e-15!63;CL:0000559!4.08e-15!63;CL:0000838!1.65e-14!52;CL:0000542!4.53e-14!53;CL:0000051!4.53e-14!53;CL:0000763!5.13e-13!112;CL:0000049!5.13e-13!112;CL:0000084!3.59e-10!25;CL:0000827!3.59e-10!25;CL:0000134!4.64e-09!358;CL:0000791!1.53e-08!18;CL:0000789!1.53e-08!18;CL:0002420!1.53e-08!18;CL:0002419!1.53e-08!18;CL:0000790!1.53e-08!18;CL:0002320!1.82e-08!365;CL:0000219!1.81e-07!390;CL:0000624!2.67e-07!6;CL:0000094!4.17e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000624;6.65e-25;6!CL:0000791;1.92e-20;18!CL:0000789;1.92e-20;18!CL:0002419;1.92e-20;18!CL:0000623;2.18e-19;3!CL:0000084;4.63e-18;25!CL:0000771;4.67e-13;2!CL:0000542;1.30e-12;53!CL:0000094;6.05e-12;8!CL:0002393;1.89e-09;6!CL:0002397;1.89e-09;6!CL:0000898;6.72e-09;3!CL:0000226;9.58e-09;3!CL:0000842;9.58e-09;3!CL:0000081;1.01e-08;11!CL:0000767;1.44e-08;3!CL:0000895;1.49e-07;1!CL:0000037;2.59e-07;1!CL:0001024;2.59e-07;1!CL:0002032;4.88e-07;1!CL:0000557;4.88e-07;1!CL:0002087;8.82e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,3.67e-25,6;CL:0000738,4.88e-22,136;CL:0000791,1.45e-20,18;CL:0000789,1.45e-20,18;CL:0002420,1.45e-20,18;CL:0002419,1.45e-20,18;CL:0000790,1.45e-20,18;CL:0000037,2.76e-20,168;CL:0000838,8.61e-20,52;CL:0000623,2.12e-19,3;CL:0000825,2.12e-19,3;CL:0000542,2.31e-19,53;CL:0000051,2.31e-19,53;CL:0000988,5.48e-19,177;CL:0002087,3.34e-18,115;CL:0000084,4.27e-18,25;CL:0000827,4.27e-18,25;CL:0002032,3.38e-16,161;CL:0000837,3.38e-16,161;CL:0002031,8.94e-14,120;CL:0000771,4.15e-13,2;CL:0000094,5.40e-12,8;CL:0000898,5.40e-09,3;CL:0000081,9.34e-09,11;CL:0000226,1.06e-08,3;CL:0000842,1.06e-08,3;CL:0000767,1.34e-08,3;CL:0000810,1.44e-07,1;CL:0000895,1.44e-07,1;CL:0002436,1.44e-07,1;CL:0002427,1.44e-07,1;CL:0002428,1.44e-07,1;CL:0002429,1.44e-07,1;CL:0002433,1.44e-07,1;CL:0002431,1.44e-07,1;CL:0002432,1.44e-07,1;CL:0001024,2.23e-07,1;CL:0000134,8.12e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000790;1.92e-20;18!CL:0000051;1.30e-12;53!CL:0002427;1.49e-07;1!UBERON:0005425;4.88e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.54e-18!102;UBERON:0003061!4.54e-18!102;UBERON:0002371!5.98e-16!80;UBERON:0002193!3.41e-15!112;UBERON:0001474!5.92e-15!86;UBERON:0004765!8.94e-12!101;UBERON:0001434!8.94e-12!101;UBERON:0002405!1.05e-11!115;UBERON:0002384!7.77e-09!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;4.88e-07;1!UBERON:0001785;4.88e-07;1!UBERON:0002464;4.88e-07;1!UBERON:0004904;4.88e-07;1!UBERON:0001021;4.88e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,4.89e-07,1;UBERON:0001785,4.89e-07,1;UBERON:0002464,4.89e-07,1;UBERON:0004904,4.89e-07,1;UBERON:0001021,4.89e-07,1;UBERON:0003902,4.89e-07,1;UBERON:0005425,4.89e-07,1 | |||
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|short_description=p@chr6:16762361..16762374,- | |||
}} |
Revision as of 19:23, 13 September 2013
Short description: | p@chr6:16762361..16762374, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:16762361..16762374, - |
Coexpression cluster: | C578_CD34_Natural_CD8_CD4_CD133_Basophils_CD14 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 4.89e-07 | 1 |
cranial nerve | 4.89e-07 | 1 |
nerve trunk | 4.89e-07 | 1 |
nerve connecting eye with brain | 4.89e-07 | 1 |
nerve | 4.89e-07 | 1 |
retinal neural layer | 4.89e-07 | 1 |
presumptive neural retina | 4.89e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.