FFCP PHASE1:Mm9::chr2:144353237..144353248,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=241688|HGNC=|MCL_coexpression_id=20|UniProt=Q8C008|association_with_transcript=-87bp_to_ENSMUST00000081982_5end|description=CAGE_peak_2_at_6330439K17Rik_5end|id=chr2:144353237..144353248,-|ontology_enrichment_celltype=CL:0000117!5.10e-12!23;CL:0000337!5.10e-12!23;CL:0000540!4.23e-08!33;CL:0000047!4.23e-08!33;CL:0000031!4.23e-08!33;CL:0000404!4.23e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,2.21e-20,23;CL:0000337,2.21e-20,23;CL:0000540,2.18e-13,33;CL:0000047,2.18e-13,33;CL:0000031,2.18e-13,33;CL:0000404,2.18e-13,33;CL:0000393,6.46e-11,39;CL:0000211,6.46e-11,39;CL:0002610,3.71e-10,3;CL:0002612,3.71e-10,3;CL:0002614,6.06e-10,3;CL:0002319,1.18e-09,43;CL:0000221,2.25e-09,44;CL:0000133,2.25e-09,44;CL:0002611,6.31e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!7.00e-16!52;UBERON:0005068!7.00e-16!52;UBERON:0006241!7.00e-16!52;UBERON:0007135!7.00e-16!52;UBERON:0001017!1.02e-15!73;UBERON:0005743!1.02e-15!73;UBERON:0000073!1.80e-15!75;UBERON:0001016!1.80e-15!75;UBERON:0002020!1.27e-14!34;UBERON:0000955!2.45e-14!50;UBERON:0006238!2.45e-14!50;UBERON:0000033!3.63e-14!63;UBERON:0002616!1.53e-13!49;UBERON:0002346!2.14e-13!71;UBERON:0003075!2.14e-13!71;UBERON:0007284!2.14e-13!71;UBERON:0004121!3.63e-12!102;UBERON:0000924!3.63e-12!102;UBERON:0006601!3.63e-12!102;UBERON:0002791!1.38e-10!29;UBERON:0003528!1.38e-10!29;UBERON:0001893!1.38e-10!29;UBERON:0003056!2.17e-10!49;UBERON:0003080!1.55e-09!40;UBERON:0007811!2.97e-09!86;UBERON:0002780!7.50e-09!39;UBERON:0001890!7.50e-09!39;UBERON:0006240!7.50e-09!39;UBERON:0003076!5.64e-08!12;UBERON:0003057!5.64e-08!12;UBERON:0002420!1.51e-07!8;UBERON:0007245!1.51e-07!8;UBERON:0010009!1.51e-07!8;UBERON:0010011!1.51e-07!8;UBERON:0000454!1.51e-07!8;UBERON:0000153!2.79e-07!94;UBERON:0002298!4.77e-07!6;UBERON:0002240!5.96e-07!6;UBERON:0005174!5.96e-07!6;UBERON:0001137!5.96e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.77e-30,54;UBERON:0001017,5.80e-28,73;UBERON:0001016,4.42e-27,75;UBERON:0001049,2.21e-26,52;UBERON:0005068,2.21e-26,52;UBERON:0006241,2.21e-26,52;UBERON:0007135,2.21e-26,52;UBERON:0002346,1.57e-22,64;UBERON:0003075,1.57e-22,64;UBERON:0007284,1.57e-22,64;UBERON:0004121,5.61e-22,95;UBERON:0000924,5.61e-22,95;UBERON:0006601,5.61e-22,95;UBERON:0003076,7.42e-20,12;UBERON:0003057,7.42e-20,12;UBERON:0010371,3.67e-19,73;UBERON:0002020,4.59e-19,34;UBERON:0002240,1.58e-18,6;UBERON:0005174,1.58e-18,6;UBERON:0001137,1.58e-18,6;UBERON:0000955,5.28e-17,47;UBERON:0006238,5.28e-17,47;UBERON:0001948,1.89e-15,5;UBERON:0002315,1.89e-15,5;UBERON:0002616,2.90e-15,46;UBERON:0010314,3.30e-14,92;UBERON:0002950,9.65e-13,4;UBERON:0001891,9.65e-13,4;UBERON:0009616,9.65e-13,4;UBERON:0010286,9.65e-13,4;UBERON:0003080,1.17e-11,40;UBERON:0003056,2.05e-10,49;UBERON:0002780,3.52e-10,39;UBERON:0001890,3.52e-10,39;UBERON:0006240,3.52e-10,39;UBERON:0004684,3.71e-10,3;UBERON:0002257,3.71e-10,3;UBERON:0002275,3.71e-10,3;UBERON:0003528,4.22e-10,29;UBERON:0002791,4.22e-10,29;UBERON:0001893,4.22e-10,29;UBERON:0002038,6.06e-10,3;UBERON:0009663,6.06e-10,3;UBERON:0009661,6.06e-10,3;UBERON:0000125,6.06e-10,3;UBERON:0002308,6.06e-10,3;UBERON:0000025,1.76e-09,114;UBERON:0002420,2.10e-09,8;UBERON:0007245,2.10e-09,8;UBERON:0010009,2.10e-09,8;UBERON:0010011,2.10e-09,8;UBERON:0000454,2.10e-09,8;UBERON:0004111,1.50e-08,122;UBERON:0011216,4.38e-08,194;UBERON:0001896,9.97e-08,2;UBERON:0002298,9.97e-08,2;UBERON:0005290,9.97e-08,2;UBERON:0010096,9.97e-08,2;UBERON:0002256,6.31e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.809265843438391,2.11596391708813,0,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0,3.42781181284564,1.98781686856452,0,0.287536413054709,0,4.40463523997555,3.44755812830007,2.4577045320999,0.659431438650969,0.914876436024097,3.64639359389732,3.62937898701795,2.8138130501584,2.90316670775939,6.18720029494702,3.84403538157578,1.4911955666024,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,2.54805239706646,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0,0,0,0.878342391034642,1.25668024088073,0,0,0,0,3.44518470631092,1.37250180845588,0.251308704225729,1.39059456153821,0,4.1557608911912,2.10913641988085,0.305518091550949,0,0.252722758433675,0,0,0,0,0.30140963567143,0.544291993210623,0.512454881139399,0.655912071918102,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0.308534225774757,0,0,0,0.329119699826961,0,0,0.292399974850665,0,0,1.26173969138476,0.720332286654991,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0.199141273254367,0,0.228497025219458,0,0,0.387904974335251,0.210407459670956,0.189709611372772,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.23469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| ||
|EntrezGene=241688 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|UniProt=Q8C008 | |||
|association_with_transcript=-87bp_to_ENSMUST00000081982_5end | |||
|description=CAGE_peak_2_at_6330439K17Rik_5end | |||
|id=chr2:144353237..144353248,- | |||
|ontology_enrichment_celltype=CL:0000117!5.10e-12!23;CL:0000337!5.10e-12!23;CL:0000540!4.23e-08!33;CL:0000047!4.23e-08!33;CL:0000031!4.23e-08!33;CL:0000404!4.23e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.21e-20,23;CL:0000337,2.21e-20,23;CL:0000540,2.18e-13,33;CL:0000047,2.18e-13,33;CL:0000031,2.18e-13,33;CL:0000404,2.18e-13,33;CL:0000393,6.46e-11,39;CL:0000211,6.46e-11,39;CL:0002610,3.71e-10,3;CL:0002612,3.71e-10,3;CL:0002614,6.06e-10,3;CL:0002319,1.18e-09,43;CL:0000221,2.25e-09,44;CL:0000133,2.25e-09,44;CL:0002611,6.31e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.00e-16!52;UBERON:0005068!7.00e-16!52;UBERON:0006241!7.00e-16!52;UBERON:0007135!7.00e-16!52;UBERON:0001017!1.02e-15!73;UBERON:0005743!1.02e-15!73;UBERON:0000073!1.80e-15!75;UBERON:0001016!1.80e-15!75;UBERON:0002020!1.27e-14!34;UBERON:0000955!2.45e-14!50;UBERON:0006238!2.45e-14!50;UBERON:0000033!3.63e-14!63;UBERON:0002616!1.53e-13!49;UBERON:0002346!2.14e-13!71;UBERON:0003075!2.14e-13!71;UBERON:0007284!2.14e-13!71;UBERON:0004121!3.63e-12!102;UBERON:0000924!3.63e-12!102;UBERON:0006601!3.63e-12!102;UBERON:0002791!1.38e-10!29;UBERON:0003528!1.38e-10!29;UBERON:0001893!1.38e-10!29;UBERON:0003056!2.17e-10!49;UBERON:0003080!1.55e-09!40;UBERON:0007811!2.97e-09!86;UBERON:0002780!7.50e-09!39;UBERON:0001890!7.50e-09!39;UBERON:0006240!7.50e-09!39;UBERON:0003076!5.64e-08!12;UBERON:0003057!5.64e-08!12;UBERON:0002420!1.51e-07!8;UBERON:0007245!1.51e-07!8;UBERON:0010009!1.51e-07!8;UBERON:0010011!1.51e-07!8;UBERON:0000454!1.51e-07!8;UBERON:0000153!2.79e-07!94;UBERON:0002298!4.77e-07!6;UBERON:0002240!5.96e-07!6;UBERON:0005174!5.96e-07!6;UBERON:0001137!5.96e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.77e-30,54;UBERON:0001017,5.80e-28,73;UBERON:0001016,4.42e-27,75;UBERON:0001049,2.21e-26,52;UBERON:0005068,2.21e-26,52;UBERON:0006241,2.21e-26,52;UBERON:0007135,2.21e-26,52;UBERON:0002346,1.57e-22,64;UBERON:0003075,1.57e-22,64;UBERON:0007284,1.57e-22,64;UBERON:0004121,5.61e-22,95;UBERON:0000924,5.61e-22,95;UBERON:0006601,5.61e-22,95;UBERON:0003076,7.42e-20,12;UBERON:0003057,7.42e-20,12;UBERON:0010371,3.67e-19,73;UBERON:0002020,4.59e-19,34;UBERON:0002240,1.58e-18,6;UBERON:0005174,1.58e-18,6;UBERON:0001137,1.58e-18,6;UBERON:0000955,5.28e-17,47;UBERON:0006238,5.28e-17,47;UBERON:0001948,1.89e-15,5;UBERON:0002315,1.89e-15,5;UBERON:0002616,2.90e-15,46;UBERON:0010314,3.30e-14,92;UBERON:0002950,9.65e-13,4;UBERON:0001891,9.65e-13,4;UBERON:0009616,9.65e-13,4;UBERON:0010286,9.65e-13,4;UBERON:0003080,1.17e-11,40;UBERON:0003056,2.05e-10,49;UBERON:0002780,3.52e-10,39;UBERON:0001890,3.52e-10,39;UBERON:0006240,3.52e-10,39;UBERON:0004684,3.71e-10,3;UBERON:0002257,3.71e-10,3;UBERON:0002275,3.71e-10,3;UBERON:0003528,4.22e-10,29;UBERON:0002791,4.22e-10,29;UBERON:0001893,4.22e-10,29;UBERON:0002038,6.06e-10,3;UBERON:0009663,6.06e-10,3;UBERON:0009661,6.06e-10,3;UBERON:0000125,6.06e-10,3;UBERON:0002308,6.06e-10,3;UBERON:0000025,1.76e-09,114;UBERON:0002420,2.10e-09,8;UBERON:0007245,2.10e-09,8;UBERON:0010009,2.10e-09,8;UBERON:0010011,2.10e-09,8;UBERON:0000454,2.10e-09,8;UBERON:0004111,1.50e-08,122;UBERON:0011216,4.38e-08,194;UBERON:0001896,9.97e-08,2;UBERON:0002298,9.97e-08,2;UBERON:0005290,9.97e-08,2;UBERON:0010096,9.97e-08,2;UBERON:0002256,6.31e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.809265843438391,2.11596391708813,0,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0,3.42781181284564,1.98781686856452,0,0.287536413054709,0,4.40463523997555,3.44755812830007,2.4577045320999,0.659431438650969,0.914876436024097,3.64639359389732,3.62937898701795,2.8138130501584,2.90316670775939,6.18720029494702,3.84403538157578,1.4911955666024,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,2.54805239706646,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0,0,0,0.878342391034642,1.25668024088073,0,0,0,0,3.44518470631092,1.37250180845588,0.251308704225729,1.39059456153821,0,4.1557608911912,2.10913641988085,0.305518091550949,0,0.252722758433675,0,0,0,0,0.30140963567143,0.544291993210623,0.512454881139399,0.655912071918102,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0.308534225774757,0,0,0,0.329119699826961,0,0,0.292399974850665,0,0,1.26173969138476,0.720332286654991,0,0,0,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0.199141273254367,0,0.228497025219458,0,0,0.387904974335251,0.210407459670956,0.189709611372772,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0.234690248288502,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,5.77982123956051,3.98519734413491,0,0,0,0,0,0,0,0.566153061577665,0.404810701674894,0,0,3.85585579706168,0.141940085208269,0.178065603667255,0.488660878060728,0.494910368917606,0,0,0,0,0,0,0,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0,0,0.535106452806212,0,0,0,0,0,0,0,0,0,0,0,4.82105785227325,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0.194451188344048,0,0.168956125490778,0,0,0.209718688851422,0.241584120826006,0,0.316011120628178,0,0,0.25984164595559,0,0,0,0,0,0,0.302478555410522,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0,0,1.12950368523413,0.460325236507177,0.572895513439397,1.3748254587495,2.05524755931193,0,0.675022500231806,1.80128481289688,0.906284817968409,0,0.103787347584177,0,0,0,0,0.367687016900028,0,0.412070114477788,0.320919209591815,0.252697211763798,0.25347929989024,0,0.187283014939765,0.192075457214608,0.17230640686684,0.476293691283074,0.347652977834566,0.578727661391115,0,0.294397840268795,0.342869252385415,0.70990322463735,0,0.145346416632329,0.470546902076653,0.0846146078916765,0,0,0.271608227691724,0,0.593175090620871,0.0985044823755635,0,0.309873682371932,0,0,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p2@6330439K17Rik | |||
}} |
Revision as of 22:17, 13 September 2013
Short description: | p2@6330439K17Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_6330439K17Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | -87bp_to_ENSMUST00000081982_5end |
EntrezGene: | 6330439K17Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.21e-20 | 23 |
neuroblast (sensu Vertebrata) | 2.21e-20 | 23 |
neuron | 2.18e-13 | 33 |
neuronal stem cell | 2.18e-13 | 33 |
neuroblast | 2.18e-13 | 33 |
electrically signaling cell | 2.18e-13 | 33 |
electrically responsive cell | 6.46e-11 | 39 |
electrically active cell | 6.46e-11 | 39 |
raphe nuclei neuron | 3.71e-10 | 3 |
neuron of the ventral spinal cord | 3.71e-10 | 3 |
neuron of the substantia nigra | 6.06e-10 | 3 |
neural cell | 1.18e-09 | 43 |
ectodermal cell | 2.25e-09 | 44 |
neurectodermal cell | 2.25e-09 | 44 |
neuron of the dorsal spinal cord | 6.31e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.