FFCP PHASE1:Mm9::chr2:148698607..148698642,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2334|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:148698607..148698642,-|id=chr2:148698607..148698642,-|ontology_enrichment_celltype=CL:0000055!6.13e-11!50;CL:0000221!1.55e-09!44;CL:0000133!1.55e-09!44;CL:0002319!2.21e-09!43;CL:0000393!5.28e-08!39;CL:0000211!5.28e-08!39;CL:0002321!1.06e-07!70;CL:0000220!1.06e-07!70;CL:0000117!4.59e-07!23;CL:0000337!4.59e-07!23|ontology_enrichment_celltype_v019_2=CL:0002453,1.09e-09,8;CL:0002319,1.84e-09,43;CL:0000221,4.06e-09,44;CL:0000133,4.06e-09,44;CL:0002321,2.38e-08,70;CL:0000117,3.21e-08,23;CL:0000337,3.21e-08,23;CL:0002194,1.11e-07,4;CL:0000766,1.11e-07,4;CL:0000234,1.11e-07,4;CL:0000576,1.11e-07,4;CL:0000235,1.11e-07,4;CL:0000864,1.11e-07,4;CL:0002009,1.11e-07,4;CL:0000040,1.11e-07,4;CL:0000559,1.11e-07,4;CL:0000333,1.93e-07,10;CL:0000095,1.93e-07,10;CL:0000243,1.93e-07,10;CL:0000123,1.93e-07,10;CL:0000125,1.93e-07,10;CL:0000030,1.93e-07,10;CL:0000339,1.93e-07,10;CL:0000723,1.94e-07,91;CL:0000048,1.94e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.50e-16!73;UBERON:0005743!1.50e-16!73;UBERON:0000073!4.07e-16!75;UBERON:0001016!4.07e-16!75;UBERON:0002020!5.48e-13!34;UBERON:0001049!8.46e-13!52;UBERON:0005068!8.46e-13!52;UBERON:0006241!8.46e-13!52;UBERON:0007135!8.46e-13!52;UBERON:0000955!5.13e-12!50;UBERON:0006238!5.13e-12!50;UBERON:0002616!1.53e-11!49;UBERON:0004121!2.31e-11!102;UBERON:0000924!2.31e-11!102;UBERON:0006601!2.31e-11!102;UBERON:0002791!2.56e-10!29;UBERON:0003528!2.56e-10!29;UBERON:0001893!2.56e-10!29;UBERON:0000025!8.88e-10!114;UBERON:0004111!1.29e-09!122;UBERON:0002346!1.82e-09!71;UBERON:0003075!1.82e-09!71;UBERON:0007284!1.82e-09!71;UBERON:0000033!2.08e-09!63;UBERON:0002619!1.81e-08!17;UBERON:0003080!7.19e-08!40;UBERON:0000956!1.24e-07!21;UBERON:0001869!1.24e-07!21;UBERON:0000203!1.24e-07!21;UBERON:0002780!1.71e-07!39;UBERON:0001890!1.71e-07!39;UBERON:0006240!1.71e-07!39;UBERON:0002021!3.57e-07!10;UBERON:0000411!3.57e-07!10;UBERON:0001950!3.57e-07!10;UBERON:0003056!9.95e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.53e-20,54;UBERON:0001017,2.13e-20,73;UBERON:0002020,4.34e-20,34;UBERON:0001016,1.48e-19,75;UBERON:0001049,7.29e-17,52;UBERON:0005068,7.29e-17,52;UBERON:0006241,7.29e-17,52;UBERON:0007135,7.29e-17,52;UBERON:0003528,4.41e-16,29;UBERON:0002791,4.41e-16,29;UBERON:0001893,4.41e-16,29;UBERON:0002619,6.22e-15,17;UBERON:0000955,1.28e-14,47;UBERON:0006238,1.28e-14,47;UBERON:0002021,5.81e-14,10;UBERON:0000411,5.81e-14,10;UBERON:0001950,5.81e-14,10;UBERON:0002616,9.55e-14,46;UBERON:0004121,3.80e-13,95;UBERON:0000924,3.80e-13,95;UBERON:0006601,3.80e-13,95;UBERON:0000956,5.17e-13,21;UBERON:0001869,5.17e-13,21;UBERON:0000203,5.17e-13,21;UBERON:0003080,1.75e-12,40;UBERON:0002346,4.00e-12,64;UBERON:0003075,4.00e-12,64;UBERON:0007284,4.00e-12,64;UBERON:0002780,1.02e-11,39;UBERON:0001890,1.02e-11,39;UBERON:0006240,1.02e-11,39;UBERON:0010371,1.23e-09,73;UBERON:0003056,4.60e-09,49;UBERON:0010314,8.32e-09,92;UBERON:0000025,8.35e-08,114;UBERON:0004111,3.24e-07,122|phase1_expression=0,0.348975407639361,0,0.30246421130683,0.500895729946347,0,0,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0,0,0.157731082679119,0.274228867211478,0.42438965179803,0.680346321208558,0,0.261199789138935,0,0.22940928106717,0,0,0,0.760093677825496,0,0.221730510655305,0,0,0,0,0.166234645358492,0.204169356262369,0.837063261473815,0,0,0,0.683045484958446,0.971020706062307,0.755380907853464,1.21652317463417,0.734187008646726,0.782391344348039,9.81113203712009,20.4308149943059,16.3321115222398,1.25987779462826,5.75010257459886,0,0,0,1.80081605225163,1.14613375975503,9.28209766099396,0.202316460859598,0.528990979272033,1.90149421051854,1.0165335962074,1.77858959222228,8.54904731417329,14.8329954385046,10.6572017241915,18.2756067416227,20.3635701820424,0.207379224616955,0,0.630974884054146,10.5690864229407,5.96345060569357,0.489963196859816,0.191690942036473,1.83843757322004,5.50579404996943,4.85211884723713,3.22573719838111,0.659431438650969,0.640413505216868,1.56274011167028,4.18774498502071,4.50210088025344,5.80633341551878,3.83017161115768,4.12877874317399,0.931997229126503,0.151452386666368,0.302286240427142,1.15945795480671,0,0,0,1.29955283489534,0,0.702222100658759,0.511290967734173,2.33807404142582,2.82671659608272,0.563373679106722,1.28326477414318,0,0,0.216491041011214,0.760079596425296,0.505524445014783,0.79928715803342,0.258937883647172,0.148442139064825,0.173485326766136,0,0,0.753613202763113,0.23517741427141,0.125666591329675,0.494389935468748,0.86759614151947,0,0.161766849947409,0.883366073841574,1.45462575940567,0,1.46390398505774,0.83778682725382,0.255457055208591,1.1981512450592,0,0.381210681219194,1.3481157546434,3.20250421973039,0.251308704225729,1.56441888173049,0.511430914660661,2.49345653471472,0.811206315338788,0.407357455401265,0.124406970610093,0.758168275301024,0,0.390361328888111,0.229902104433473,0,0.30140963567143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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2334 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:148698607..148698642,- | |||
|id=chr2:148698607..148698642,- | |||
|ontology_enrichment_celltype=CL:0000055!6.13e-11!50;CL:0000221!1.55e-09!44;CL:0000133!1.55e-09!44;CL:0002319!2.21e-09!43;CL:0000393!5.28e-08!39;CL:0000211!5.28e-08!39;CL:0002321!1.06e-07!70;CL:0000220!1.06e-07!70;CL:0000117!4.59e-07!23;CL:0000337!4.59e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.09e-09,8;CL:0002319,1.84e-09,43;CL:0000221,4.06e-09,44;CL:0000133,4.06e-09,44;CL:0002321,2.38e-08,70;CL:0000117,3.21e-08,23;CL:0000337,3.21e-08,23;CL:0002194,1.11e-07,4;CL:0000766,1.11e-07,4;CL:0000234,1.11e-07,4;CL:0000576,1.11e-07,4;CL:0000235,1.11e-07,4;CL:0000864,1.11e-07,4;CL:0002009,1.11e-07,4;CL:0000040,1.11e-07,4;CL:0000559,1.11e-07,4;CL:0000333,1.93e-07,10;CL:0000095,1.93e-07,10;CL:0000243,1.93e-07,10;CL:0000123,1.93e-07,10;CL:0000125,1.93e-07,10;CL:0000030,1.93e-07,10;CL:0000339,1.93e-07,10;CL:0000723,1.94e-07,91;CL:0000048,1.94e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.50e-16!73;UBERON:0005743!1.50e-16!73;UBERON:0000073!4.07e-16!75;UBERON:0001016!4.07e-16!75;UBERON:0002020!5.48e-13!34;UBERON:0001049!8.46e-13!52;UBERON:0005068!8.46e-13!52;UBERON:0006241!8.46e-13!52;UBERON:0007135!8.46e-13!52;UBERON:0000955!5.13e-12!50;UBERON:0006238!5.13e-12!50;UBERON:0002616!1.53e-11!49;UBERON:0004121!2.31e-11!102;UBERON:0000924!2.31e-11!102;UBERON:0006601!2.31e-11!102;UBERON:0002791!2.56e-10!29;UBERON:0003528!2.56e-10!29;UBERON:0001893!2.56e-10!29;UBERON:0000025!8.88e-10!114;UBERON:0004111!1.29e-09!122;UBERON:0002346!1.82e-09!71;UBERON:0003075!1.82e-09!71;UBERON:0007284!1.82e-09!71;UBERON:0000033!2.08e-09!63;UBERON:0002619!1.81e-08!17;UBERON:0003080!7.19e-08!40;UBERON:0000956!1.24e-07!21;UBERON:0001869!1.24e-07!21;UBERON:0000203!1.24e-07!21;UBERON:0002780!1.71e-07!39;UBERON:0001890!1.71e-07!39;UBERON:0006240!1.71e-07!39;UBERON:0002021!3.57e-07!10;UBERON:0000411!3.57e-07!10;UBERON:0001950!3.57e-07!10;UBERON:0003056!9.95e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.53e-20,54;UBERON:0001017,2.13e-20,73;UBERON:0002020,4.34e-20,34;UBERON:0001016,1.48e-19,75;UBERON:0001049,7.29e-17,52;UBERON:0005068,7.29e-17,52;UBERON:0006241,7.29e-17,52;UBERON:0007135,7.29e-17,52;UBERON:0003528,4.41e-16,29;UBERON:0002791,4.41e-16,29;UBERON:0001893,4.41e-16,29;UBERON:0002619,6.22e-15,17;UBERON:0000955,1.28e-14,47;UBERON:0006238,1.28e-14,47;UBERON:0002021,5.81e-14,10;UBERON:0000411,5.81e-14,10;UBERON:0001950,5.81e-14,10;UBERON:0002616,9.55e-14,46;UBERON:0004121,3.80e-13,95;UBERON:0000924,3.80e-13,95;UBERON:0006601,3.80e-13,95;UBERON:0000956,5.17e-13,21;UBERON:0001869,5.17e-13,21;UBERON:0000203,5.17e-13,21;UBERON:0003080,1.75e-12,40;UBERON:0002346,4.00e-12,64;UBERON:0003075,4.00e-12,64;UBERON:0007284,4.00e-12,64;UBERON:0002780,1.02e-11,39;UBERON:0001890,1.02e-11,39;UBERON:0006240,1.02e-11,39;UBERON:0010371,1.23e-09,73;UBERON:0003056,4.60e-09,49;UBERON:0010314,8.32e-09,92;UBERON:0000025,8.35e-08,114;UBERON:0004111,3.24e-07,122 | |||
|phase1_expression=0,0.348975407639361,0,0.30246421130683,0.500895729946347,0,0,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0,0,0.157731082679119,0.274228867211478,0.42438965179803,0.680346321208558,0,0.261199789138935,0,0.22940928106717,0,0,0,0.760093677825496,0,0.221730510655305,0,0,0,0,0.166234645358492,0.204169356262369,0.837063261473815,0,0,0,0.683045484958446,0.971020706062307,0.755380907853464,1.21652317463417,0.734187008646726,0.782391344348039,9.81113203712009,20.4308149943059,16.3321115222398,1.25987779462826,5.75010257459886,0,0,0,1.80081605225163,1.14613375975503,9.28209766099396,0.202316460859598,0.528990979272033,1.90149421051854,1.0165335962074,1.77858959222228,8.54904731417329,14.8329954385046,10.6572017241915,18.2756067416227,20.3635701820424,0.207379224616955,0,0.630974884054146,10.5690864229407,5.96345060569357,0.489963196859816,0.191690942036473,1.83843757322004,5.50579404996943,4.85211884723713,3.22573719838111,0.659431438650969,0.640413505216868,1.56274011167028,4.18774498502071,4.50210088025344,5.80633341551878,3.83017161115768,4.12877874317399,0.931997229126503,0.151452386666368,0.302286240427142,1.15945795480671,0,0,0,1.29955283489534,0,0.702222100658759,0.511290967734173,2.33807404142582,2.82671659608272,0.563373679106722,1.28326477414318,0,0,0.216491041011214,0.760079596425296,0.505524445014783,0.79928715803342,0.258937883647172,0.148442139064825,0.173485326766136,0,0,0.753613202763113,0.23517741427141,0.125666591329675,0.494389935468748,0.86759614151947,0,0.161766849947409,0.883366073841574,1.45462575940567,0,1.46390398505774,0.83778682725382,0.255457055208591,1.1981512450592,0,0.381210681219194,1.3481157546434,3.20250421973039,0.251308704225729,1.56441888173049,0.511430914660661,2.49345653471472,0.811206315338788,0.407357455401265,0.124406970610093,0.758168275301024,0,0.390361328888111,0.229902104433473,0,0.30140963567143,0.204109497453984,0.512454881139399,0.374806898238915,0.517406741478031,0,0,0,0,0,0,0.205782136407943,0,0.702213187313235,0.51469581422943,0.568326998791185,0,0.469052119962192,0.900310307305074,0.710234206755631,0.196764231747404,0.462801338662135,0.465067889500816,0,0.233530684734339,0.16455984991348,0.32833492815819,0.405344047729279,1.02339991197733,0,0.805238512562231,1.47202963994889,0.308713837137853,0,0.264450566663544,0,0.464473343720877,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.0632365371242573,0.590440591918409,0.470996183524124,0,0.592905254174298,0,0,0.449724224769707,0.202860121388503,0.72353147925725,0.25462585178142,0,0.486405680325106,0.274561413188081,2.87536413054709,0,0,0,0.358794827043824,0,0.369506380333209,0.189491411770485,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0.390267295715598,0.315270288212382,0.44292937929755,0.637819074629948,0.81931657357869,0.518054945597687,0.578596234326046,15.0791283939272,12.5098307278303,0,0.275936746304732,1.76605648986571,0.703270119553219,0.163934945376675,1.00988370881749,0.94652465824877,0.780877488593277,0,0.238968797952552,0.222798674082394,0.283076530788832,0.809621403349789,0.292255857911312,0.395287777946524,2.57057053137446,0.283880170416537,0,0,0.329940245945071,1.32745138339963,0.485561272309963,0,0.943025398779491,0,0,0.258428293168221,0,0,0.316036757935816,3.16255825724996,1.03135543248187,0,0.18006109403131,0.258717367565509,0.428674070063185,0,0,0,0.304464949114599,0,1.0591603543191,0.441056796109924,0.65954501176592,0.161464426695906,0.0603129249281559,0.358117032009409,0,0,0.927126510052548,0.512612642393558,0.206386867963223,0.370389054739423,0.188368457004691,0.27338845544205,0.686334519619568,0.169978429993855,0,0,0.954670618015114,0,0,0.432021363287205,0.418176592028937,0.436725127492355,0.134864346384821,0.330613822901344,1.30877970992015,0.129614973291793,0,1.12738587736838,0.299033092087958,0.496375471371293,0.194451188344048,0.258319646955462,0.506868376472335,0.117357238645754,0,0.104859344425711,0.241584120826006,0.288030006257865,0.632022241256357,0.405450430580328,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0,0.0762068066549998,0.201652370273681,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0.221985953374065,0.0897138566094757,0.167884616364078,0.579568782096571,0.187682475451182,0,0.214368379079066,1.00314420807073,5.64751842617067,4.60325236507177,4.58316410751517,3.60891682921744,6.16574267793578,6.0431511791176,5.40018000185445,3.60256962579376,2.71885445390523,3.10656187051092,0,0,0,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0.962757628775446,0,0,0.565879024158229,0.187283014939765,0.320125762024346,0.17230640686684,0,0.115884325944855,0,0.412085900803307,0.147198920134397,1.02860775715625,0.354951612318675,0.238436189947321,0.290692833264657,0,0.338458431566706,0.365855945745545,0,0.407412341537585,0,0.237270036248348,0,0.409231043169689,0.464810523557898,0.192906610981141,0,0,0,0.57386499620653,0,0.231867835620421 | |||
|short_description=p@chr2:148698607..148698642,- | |||
}} |
Revision as of 22:22, 13 September 2013
Short description: | p@chr2:148698607..148698642, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:148698607..148698642, - |
Coexpression cluster: | MCL_coexpression_mm9:2334 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.09e-09 | 8 |
neural cell | 1.84e-09 | 43 |
ectodermal cell | 4.06e-09 | 44 |
neurectodermal cell | 4.06e-09 | 44 |
embryonic cell | 2.38e-08 | 70 |
CNS neuron (sensu Vertebrata) | 3.21e-08 | 23 |
neuroblast (sensu Vertebrata) | 3.21e-08 | 23 |
monopoietic cell | 1.11e-07 | 4 |
myeloid leukocyte | 1.11e-07 | 4 |
phagocyte | 1.11e-07 | 4 |
monocyte | 1.11e-07 | 4 |
macrophage | 1.11e-07 | 4 |
tissue-resident macrophage | 1.11e-07 | 4 |
macrophage dendritic cell progenitor | 1.11e-07 | 4 |
monoblast | 1.11e-07 | 4 |
promonocyte | 1.11e-07 | 4 |
migratory neural crest cell | 1.93e-07 | 10 |
neuron associated cell | 1.93e-07 | 10 |
glial cell (sensu Vertebrata) | 1.93e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 1.93e-07 | 10 |
glial cell | 1.93e-07 | 10 |
glioblast | 1.93e-07 | 10 |
glioblast (sensu Vertebrata) | 1.93e-07 | 10 |
somatic stem cell | 1.94e-07 | 91 |
multi fate stem cell | 1.94e-07 | 91 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.