FFCP PHASE1:Mm9::chr2:157387453..157387467,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=470|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:157387453..157387467,+|id=chr2:157387453..157387467,+|ontology_enrichment_celltype=CL:0000540!6.73e-19!33;CL:0000047!6.73e-19!33;CL:0000031!6.73e-19!33;CL:0000404!6.73e-19!33;CL:0000117!2.61e-17!23;CL:0000337!2.61e-17!23;CL:0000221!3.68e-16!44;CL:0000133!3.68e-16!44;CL:0002319!4.26e-16!43;CL:0000393!5.97e-15!39;CL:0000211!5.97e-15!39;CL:0000055!1.28e-12!50|ontology_enrichment_celltype_v019_2=CL:0000117,9.94e-26,23;CL:0000337,9.94e-26,23;CL:0000540,7.55e-24,33;CL:0000047,7.55e-24,33;CL:0000031,7.55e-24,33;CL:0000404,7.55e-24,33;CL:0002319,1.53e-20,43;CL:0000221,8.05e-20,44;CL:0000133,8.05e-20,44;CL:0000393,1.37e-18,39;CL:0000211,1.37e-18,39;CL:0002321,1.30e-08,70;CL:0002609,1.00e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.10e-30!73;UBERON:0005743!6.10e-30!73;UBERON:0000073!2.96e-28!75;UBERON:0001016!2.96e-28!75;UBERON:0004121!2.37e-27!102;UBERON:0000924!2.37e-27!102;UBERON:0006601!2.37e-27!102;UBERON:0002346!4.73e-24!71;UBERON:0003075!4.73e-24!71;UBERON:0007284!4.73e-24!71;UBERON:0001049!6.04e-22!52;UBERON:0005068!6.04e-22!52;UBERON:0006241!6.04e-22!52;UBERON:0007135!6.04e-22!52;UBERON:0000033!9.58e-21!63;UBERON:0000955!1.05e-20!50;UBERON:0006238!1.05e-20!50;UBERON:0002616!1.43e-20!49;UBERON:0003056!1.81e-19!49;UBERON:0003080!3.05e-18!40;UBERON:0002780!6.52e-18!39;UBERON:0001890!6.52e-18!39;UBERON:0006240!6.52e-18!39;UBERON:0002020!1.23e-14!34;UBERON:0002791!2.22e-11!29;UBERON:0003528!2.22e-11!29;UBERON:0001893!2.22e-11!29;UBERON:0000153!2.27e-10!94;UBERON:0007811!4.96e-10!86;UBERON:0001894!6.55e-08!10;UBERON:0006222!6.55e-08!10;UBERON:0000956!1.10e-07!21;UBERON:0001869!1.10e-07!21;UBERON:0000203!1.10e-07!21;UBERON:0000007!2.12e-07!8;UBERON:0003296!2.12e-07!8;UBERON:0010133!2.12e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.87e-31,73;UBERON:0001016,3.81e-30,75;UBERON:0000073,4.89e-28,54;UBERON:0001049,2.05e-24,52;UBERON:0005068,2.05e-24,52;UBERON:0006241,2.05e-24,52;UBERON:0007135,2.05e-24,52;UBERON:0004121,2.50e-23,95;UBERON:0000924,2.50e-23,95;UBERON:0006601,2.50e-23,95;UBERON:0003080,3.36e-23,40;UBERON:0002780,1.08e-22,39;UBERON:0001890,1.08e-22,39;UBERON:0006240,1.08e-22,39;UBERON:0002346,4.64e-22,64;UBERON:0003075,4.64e-22,64;UBERON:0007284,4.64e-22,64;UBERON:0003056,1.18e-20,49;UBERON:0002616,3.30e-20,46;UBERON:0000955,1.56e-19,47;UBERON:0006238,1.56e-19,47;UBERON:0002020,5.47e-19,34;UBERON:0010371,1.34e-17,73;UBERON:0003528,3.48e-14,29;UBERON:0002791,3.48e-14,29;UBERON:0001893,3.48e-14,29;UBERON:0010314,5.08e-12,92;UBERON:0000007,1.60e-10,8;UBERON:0003296,1.60e-10,8;UBERON:0010133,1.60e-10,8;UBERON:0001894,7.64e-10,10;UBERON:0006222,7.64e-10,10;UBERON:0000956,1.89e-08,21;UBERON:0001869,1.89e-08,21;UBERON:0000203,1.89e-08,21;UBERON:0002420,1.71e-07,8;UBERON:0007245,1.71e-07,8;UBERON:0010009,1.71e-07,8;UBERON:0010011,1.71e-07,8;UBERON:0000454,1.71e-07,8|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9119567217402,0.65407546914134,0,0,0.279972843250725,0,0,0,0,0.257259436035947,0,0.515672092277442,29.3358868246417,55.5440528235635,22.8179305262225,0.338844532069132,0,0,0,0,3.89480143673926,12.2949857702897,9.43575472007147,35.6415677195663,8.41299845405528,10.2834354385369,8.61387309711293,10.656699531701,27.7951865952885,11.0306254393203,7.70811166995721,4.97980618532232,4.91540906419979,29.8063010270238,77.5815217748434,37.5057626800867,6.70039197603314,13.5063026407603,7.02871939773326,13.258286346315,16.5151149726959,9.87917062874093,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0.148442139064825,0.693941307064543,2.13125834818499,0.230615497256059,0.452167921657868,0.587943535678524,0,0.741584903203122,0.289198713839823,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,1.19832511523858,0,4.64921102817598,0.173824320192276,0.511430914660661,2.28566849015516,0.811206315338788,0.203678727700633,0,0,0,1.56144531555244,0.689706313300419,2.52086981727489,1.20563854268572,0.884474488967262,0.896796041993948,0.843315521037559,0.258703370739016,4.31135985865684,1.70195472151037,1.75951124163949,0.657587197282725,0.278047249225598,0,0,0.59710280045548,0,0,0,0.414251545071004,0.234526059981096,0,0,0,0,0.232533944750408,0,0.116765342367169,0.16455984991348,0,0,0,0,0,1.47202963994889,3.2929475961371,0,0,1.2797295032114,1.85789337488351,0.902072229254653,0,0.444756087689741,0,0,0,0,0.198956472041151,0,0,0,0,2.0863469104839,0.571242563048644,0,0.203651327845314,0,0.210407459670956,0,0,0,0,0,0.333690211432188,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0.757965647081939,0.814824882210129,0,0.704070744865506,1.67506257441816,0.476087281772027,0,0,0,0.318909537314974,0,0,0,0,0,0.491764273019036,0,0.321101179975584,0.234423373184406,0,0,0.631016438832513,0.390438744296638,1.93881057959519,1.19484398976276,1.11399337041197,0.566153061577665,1.21443210502468,1.16902343164525,1.58115111178609,0.642642632843614,0.283880170416537,0,0,0,1.32745138339963,0.971122544619926,0,0.565815239267694,1.77181135728464,1.22974059177571,0,0,0.356497378384721,0,0,0,25.8734100372879,11.3438489239725,22.5084109781993,25.0774330986963,50.1872861207634,40.3113527780679,24.0241570079097,32.8822145043767,0,0,0,0.49465875882444,0,0.120625849856312,0.119372344003136,0,0,0.18542530201051,0,0.82554747185289,0.925972636848558,0,0,0,0,0,0,0,1.73984796469624,1.01659733563424,0.324016022465404,0,1.09181281873089,0.269728692769641,0.165306911450672,0,0,0,0,0.299033092087958,0.496375471371293,0,0.129159823477731,0.337912250981556,0.117357238645754,0.2604087696879,0,0,0,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0.564751842617067,2.30162618253588,1.14579102687879,0.859265911718438,1.37016503954128,2.2661816921691,0.675022500231806,1.80128481289688,3.17199686288943,2.5888015587591,1.55681021376265,4.38927360741134,1.53660245178721,1.45864030240976,1.04806581313991,0,1.33348036680969,0.618105171716683,0.64183841918363,1.01078884705519,1.77435509923168,2.07488975524684,2.1537546718073,1.40855335290712,1.09127391015665,1.42888107384922,0.463537303779422,1.35036454324594,0,1.47198920134397,2.05721551431249,1.4198064492747,1.66905332963125,1.74415699958794,0.846984423737976,0.846146078916765,0.365855945745545,0.526139422875686,1.08643291076689,1.12228454331548,0.711810108745045,0.788035859004508,0.818462086339379,0.619747364743864,0.578719832943424,3.49734809113124,0.701794825336225,0.644613162144895,0,0,0|short_description=p@chr2:157387453..157387467,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=470 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:157387453..157387467,+ | |||
|id=chr2:157387453..157387467,+ | |||
|ontology_enrichment_celltype=CL:0000540!6.73e-19!33;CL:0000047!6.73e-19!33;CL:0000031!6.73e-19!33;CL:0000404!6.73e-19!33;CL:0000117!2.61e-17!23;CL:0000337!2.61e-17!23;CL:0000221!3.68e-16!44;CL:0000133!3.68e-16!44;CL:0002319!4.26e-16!43;CL:0000393!5.97e-15!39;CL:0000211!5.97e-15!39;CL:0000055!1.28e-12!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.94e-26,23;CL:0000337,9.94e-26,23;CL:0000540,7.55e-24,33;CL:0000047,7.55e-24,33;CL:0000031,7.55e-24,33;CL:0000404,7.55e-24,33;CL:0002319,1.53e-20,43;CL:0000221,8.05e-20,44;CL:0000133,8.05e-20,44;CL:0000393,1.37e-18,39;CL:0000211,1.37e-18,39;CL:0002321,1.30e-08,70;CL:0002609,1.00e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.10e-30!73;UBERON:0005743!6.10e-30!73;UBERON:0000073!2.96e-28!75;UBERON:0001016!2.96e-28!75;UBERON:0004121!2.37e-27!102;UBERON:0000924!2.37e-27!102;UBERON:0006601!2.37e-27!102;UBERON:0002346!4.73e-24!71;UBERON:0003075!4.73e-24!71;UBERON:0007284!4.73e-24!71;UBERON:0001049!6.04e-22!52;UBERON:0005068!6.04e-22!52;UBERON:0006241!6.04e-22!52;UBERON:0007135!6.04e-22!52;UBERON:0000033!9.58e-21!63;UBERON:0000955!1.05e-20!50;UBERON:0006238!1.05e-20!50;UBERON:0002616!1.43e-20!49;UBERON:0003056!1.81e-19!49;UBERON:0003080!3.05e-18!40;UBERON:0002780!6.52e-18!39;UBERON:0001890!6.52e-18!39;UBERON:0006240!6.52e-18!39;UBERON:0002020!1.23e-14!34;UBERON:0002791!2.22e-11!29;UBERON:0003528!2.22e-11!29;UBERON:0001893!2.22e-11!29;UBERON:0000153!2.27e-10!94;UBERON:0007811!4.96e-10!86;UBERON:0001894!6.55e-08!10;UBERON:0006222!6.55e-08!10;UBERON:0000956!1.10e-07!21;UBERON:0001869!1.10e-07!21;UBERON:0000203!1.10e-07!21;UBERON:0000007!2.12e-07!8;UBERON:0003296!2.12e-07!8;UBERON:0010133!2.12e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.87e-31,73;UBERON:0001016,3.81e-30,75;UBERON:0000073,4.89e-28,54;UBERON:0001049,2.05e-24,52;UBERON:0005068,2.05e-24,52;UBERON:0006241,2.05e-24,52;UBERON:0007135,2.05e-24,52;UBERON:0004121,2.50e-23,95;UBERON:0000924,2.50e-23,95;UBERON:0006601,2.50e-23,95;UBERON:0003080,3.36e-23,40;UBERON:0002780,1.08e-22,39;UBERON:0001890,1.08e-22,39;UBERON:0006240,1.08e-22,39;UBERON:0002346,4.64e-22,64;UBERON:0003075,4.64e-22,64;UBERON:0007284,4.64e-22,64;UBERON:0003056,1.18e-20,49;UBERON:0002616,3.30e-20,46;UBERON:0000955,1.56e-19,47;UBERON:0006238,1.56e-19,47;UBERON:0002020,5.47e-19,34;UBERON:0010371,1.34e-17,73;UBERON:0003528,3.48e-14,29;UBERON:0002791,3.48e-14,29;UBERON:0001893,3.48e-14,29;UBERON:0010314,5.08e-12,92;UBERON:0000007,1.60e-10,8;UBERON:0003296,1.60e-10,8;UBERON:0010133,1.60e-10,8;UBERON:0001894,7.64e-10,10;UBERON:0006222,7.64e-10,10;UBERON:0000956,1.89e-08,21;UBERON:0001869,1.89e-08,21;UBERON:0000203,1.89e-08,21;UBERON:0002420,1.71e-07,8;UBERON:0007245,1.71e-07,8;UBERON:0010009,1.71e-07,8;UBERON:0010011,1.71e-07,8;UBERON:0000454,1.71e-07,8 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9119567217402,0.65407546914134,0,0,0.279972843250725,0,0,0,0,0.257259436035947,0,0.515672092277442,29.3358868246417,55.5440528235635,22.8179305262225,0.338844532069132,0,0,0,0,3.89480143673926,12.2949857702897,9.43575472007147,35.6415677195663,8.41299845405528,10.2834354385369,8.61387309711293,10.656699531701,27.7951865952885,11.0306254393203,7.70811166995721,4.97980618532232,4.91540906419979,29.8063010270238,77.5815217748434,37.5057626800867,6.70039197603314,13.5063026407603,7.02871939773326,13.258286346315,16.5151149726959,9.87917062874093,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0,0,0.148442139064825,0.693941307064543,2.13125834818499,0.230615497256059,0.452167921657868,0.587943535678524,0,0.741584903203122,0.289198713839823,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,1.19832511523858,0,4.64921102817598,0.173824320192276,0.511430914660661,2.28566849015516,0.811206315338788,0.203678727700633,0,0,0,1.56144531555244,0.689706313300419,2.52086981727489,1.20563854268572,0.884474488967262,0.896796041993948,0.843315521037559,0.258703370739016,4.31135985865684,1.70195472151037,1.75951124163949,0.657587197282725,0.278047249225598,0,0,0.59710280045548,0,0,0,0.414251545071004,0.234526059981096,0,0,0,0,0.232533944750408,0,0.116765342367169,0.16455984991348,0,0,0,0,0,1.47202963994889,3.2929475961371,0,0,1.2797295032114,1.85789337488351,0.902072229254653,0,0.444756087689741,0,0,0,0,0.198956472041151,0,0,0,0,2.0863469104839,0.571242563048644,0,0.203651327845314,0,0.210407459670956,0,0,0,0,0,0.333690211432188,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0.757965647081939,0.814824882210129,0,0.704070744865506,1.67506257441816,0.476087281772027,0,0,0,0.318909537314974,0,0,0,0,0,0.491764273019036,0,0.321101179975584,0.234423373184406,0,0,0.631016438832513,0.390438744296638,1.93881057959519,1.19484398976276,1.11399337041197,0.566153061577665,1.21443210502468,1.16902343164525,1.58115111178609,0.642642632843614,0.283880170416537,0,0,0,1.32745138339963,0.971122544619926,0,0.565815239267694,1.77181135728464,1.22974059177571,0,0,0.356497378384721,0,0,0,25.8734100372879,11.3438489239725,22.5084109781993,25.0774330986963,50.1872861207634,40.3113527780679,24.0241570079097,32.8822145043767,0,0,0,0.49465875882444,0,0.120625849856312,0.119372344003136,0,0,0.18542530201051,0,0.82554747185289,0.925972636848558,0,0,0,0,0,0,0,1.73984796469624,1.01659733563424,0.324016022465404,0,1.09181281873089,0.269728692769641,0.165306911450672,0,0,0,0,0.299033092087958,0.496375471371293,0,0.129159823477731,0.337912250981556,0.117357238645754,0.2604087696879,0,0,0,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0.564751842617067,2.30162618253588,1.14579102687879,0.859265911718438,1.37016503954128,2.2661816921691,0.675022500231806,1.80128481289688,3.17199686288943,2.5888015587591,1.55681021376265,4.38927360741134,1.53660245178721,1.45864030240976,1.04806581313991,0,1.33348036680969,0.618105171716683,0.64183841918363,1.01078884705519,1.77435509923168,2.07488975524684,2.1537546718073,1.40855335290712,1.09127391015665,1.42888107384922,0.463537303779422,1.35036454324594,0,1.47198920134397,2.05721551431249,1.4198064492747,1.66905332963125,1.74415699958794,0.846984423737976,0.846146078916765,0.365855945745545,0.526139422875686,1.08643291076689,1.12228454331548,0.711810108745045,0.788035859004508,0.818462086339379,0.619747364743864,0.578719832943424,3.49734809113124,0.701794825336225,0.644613162144895,0,0,0 | |||
|short_description=p@chr2:157387453..157387467,+ | |||
}} |
Revision as of 22:39, 13 September 2013
Short description: | p@chr2:157387453..157387467, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:157387453..157387467, + |
Coexpression cluster: | MCL_coexpression_mm9:470 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.94e-26 | 23 |
neuroblast (sensu Vertebrata) | 9.94e-26 | 23 |
neuron | 7.55e-24 | 33 |
neuronal stem cell | 7.55e-24 | 33 |
neuroblast | 7.55e-24 | 33 |
electrically signaling cell | 7.55e-24 | 33 |
neural cell | 1.53e-20 | 43 |
ectodermal cell | 8.05e-20 | 44 |
neurectodermal cell | 8.05e-20 | 44 |
electrically responsive cell | 1.37e-18 | 39 |
electrically active cell | 1.37e-18 | 39 |
embryonic cell | 1.30e-08 | 70 |
neuron of cerebral cortex | 1.00e-07 | 6 |
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