FFCP PHASE1:Mm9::chr2:157387588..157387620,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=470|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:157387588..157387620,-|id=chr2:157387588..157387620,-|ontology_enrichment_celltype=CL:0000117!3.35e-18!23;CL:0000337!3.35e-18!23;CL:0000540!3.50e-14!33;CL:0000047!3.50e-14!33;CL:0000031!3.50e-14!33;CL:0000404!3.50e-14!33;CL:0000393!3.52e-12!39;CL:0000211!3.52e-12!39;CL:0000221!1.79e-11!44;CL:0000133!1.79e-11!44;CL:0002319!2.81e-11!43;CL:0000055!1.30e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,4.94e-45,23;CL:0000337,4.94e-45,23;CL:0000540,3.20e-30,33;CL:0000047,3.20e-30,33;CL:0000031,3.20e-30,33;CL:0000404,3.20e-30,33;CL:0000393,5.63e-25,39;CL:0000211,5.63e-25,39;CL:0002319,8.72e-25,43;CL:0000221,3.94e-24,44;CL:0000133,3.94e-24,44;CL:0002609,9.73e-18,6;CL:0002321,1.18e-13,70;CL:0000120,5.74e-11,3;CL:0002613,1.12e-10,3;CL:0002608,8.94e-10,3;CL:0000723,1.46e-09,91;CL:0000048,1.46e-09,91;CL:0002614,3.77e-09,3;CL:0000034,1.01e-08,97;CL:0002611,4.60e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.43e-14!73;UBERON:0005743!4.43e-14!73;UBERON:0002346!9.56e-14!71;UBERON:0003075!9.56e-14!71;UBERON:0007284!9.56e-14!71;UBERON:0000073!2.92e-13!75;UBERON:0001016!2.92e-13!75;UBERON:0004121!9.53e-13!102;UBERON:0000924!9.53e-13!102;UBERON:0006601!9.53e-13!102;UBERON:0001049!1.21e-12!52;UBERON:0005068!1.21e-12!52;UBERON:0006241!1.21e-12!52;UBERON:0007135!1.21e-12!52;UBERON:0003056!3.48e-11!49;UBERON:0000033!4.97e-11!63;UBERON:0002780!1.13e-09!39;UBERON:0001890!1.13e-09!39;UBERON:0006240!1.13e-09!39;UBERON:0002616!1.66e-09!49;UBERON:0003080!3.38e-09!40;UBERON:0000955!4.20e-09!50;UBERON:0006238!4.20e-09!50;UBERON:0000007!8.73e-09!8;UBERON:0003296!8.73e-09!8;UBERON:0010133!8.73e-09!8;UBERON:0002020!1.42e-07!34;UBERON:0001894!1.53e-07!10;UBERON:0006222!1.53e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.68e-30,52;UBERON:0005068,2.68e-30,52;UBERON:0006241,2.68e-30,52;UBERON:0007135,2.68e-30,52;UBERON:0001017,3.16e-29,73;UBERON:0000073,5.25e-29,54;UBERON:0002780,1.68e-28,39;UBERON:0001890,1.68e-28,39;UBERON:0006240,1.68e-28,39;UBERON:0001016,2.56e-28,75;UBERON:0003080,1.10e-27,40;UBERON:0000007,1.81e-25,8;UBERON:0003296,1.81e-25,8;UBERON:0010133,1.81e-25,8;UBERON:0002346,9.40e-24,64;UBERON:0003075,9.40e-24,64;UBERON:0007284,9.40e-24,64;UBERON:0002616,1.53e-23,46;UBERON:0000955,5.93e-23,47;UBERON:0006238,5.93e-23,47;UBERON:0003056,7.53e-22,49;UBERON:0004121,2.53e-21,95;UBERON:0000924,2.53e-21,95;UBERON:0006601,2.53e-21,95;UBERON:0010371,2.98e-20,73;UBERON:0001894,4.01e-20,10;UBERON:0006222,4.01e-20,10;UBERON:0002020,1.04e-19,34;UBERON:0010314,4.22e-15,92;UBERON:0002420,1.75e-13,8;UBERON:0007245,1.75e-13,8;UBERON:0010009,1.75e-13,8;UBERON:0010011,1.75e-13,8;UBERON:0000454,1.75e-13,8;UBERON:0003528,6.31e-13,29;UBERON:0002791,6.31e-13,29;UBERON:0001893,6.31e-13,29;UBERON:0000025,2.85e-11,114;UBERON:0004111,3.22e-10,122;UBERON:0001948,8.19e-10,5;UBERON:0002315,8.19e-10,5;UBERON:0002038,3.77e-09,3;UBERON:0009663,3.77e-09,3;UBERON:0009661,3.77e-09,3;UBERON:0000125,3.77e-09,3;UBERON:0002308,3.77e-09,3;UBERON:0002240,3.42e-08,6;UBERON:0005174,3.42e-08,6;UBERON:0001137,3.42e-08,6;UBERON:0011216,7.98e-08,194;UBERON:0002256,4.60e-07,2;UBERON:0002950,5.63e-07,4;UBERON:0001891,5.63e-07,4;UBERON:0009616,5.63e-07,4;UBERON:0010286,5.63e-07,4|phase1_expression=0.480446541314382,0,0,0,0.500895729946347,0,0,0.129123323441576,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.218025156380447,0,0,0,0,0,0,0,0.257259436035947,0,0,6.87875966922632,11.6378015439847,9.50747105259269,0.338844532069132,0,0,0,0,0.299600110518405,1.53687322128622,2.7996195323289,5.13022565660425,2.10324961351382,4.28476476605705,2.87129103237098,3.1847607795888,2.30029130443767,4.5960939330501,0,0.510749352340751,0.307213066512487,7.38563211289086,8.69132614222892,6.77187381723788,1.95428099300967,2.25105044012672,2.13917546887534,2.06240009831567,0.854230084794618,3.16879057903011,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0.22836775943812,0,0,0.346970653532272,0.913396434936424,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0.879580464790051,0,0,0,0.162241263067758,0,0.124406970610093,0,0,0.520481771850815,0.689706313300419,0.720248519221397,0.30140963567143,0.0680364991513279,0.12811372028485,0.468508622798644,0,0.431135985865684,0.378212160335639,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308713837137853,0,0,0.426576501070468,0,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0.568474235311454,0,0.169745085775188,0.234690248288502,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0.35163505977661,0,0.252470927204373,0,0,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0,0,0,0,0,0,0,0.242780636154981,0.302323556964751,0,0.590603785761546,0,0,0,0,0,0,0,6.12791290356818,3.42116078659489,2.97524972700335,6.85878512101095,11.5271151867478,9.98865378571595,6.91105886528908,10.0473433207818,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0.185194527369712,0,0,0,0,0,0,0,0.474503990371703,0,0.108005340821801,0.209088296014469,0,0,0,0.26175594198403,0,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0.726511433089237,0.798049746802062,1.02440163452481,0,0.209613162627982,0.367687016900028,0,0,0,0.505394423527595,0.50695859978048,0.188626341386076,0.37456602987953,0.192075457214608,0.459483751644906,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0.476872379894642,0,0.376437521661322,0.338458431566706,0.548783918618318,0.263069711437843,0.543216455383447,0,0.237270036248348,0.197008964751127,0,0.464810523557898,0.192906610981141,0.249810577937946,0.467863216890817,0,0,0,0|short_description=p@chr2:157387588..157387620,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=470 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:157387588..157387620,- | |||
|id=chr2:157387588..157387620,- | |||
|ontology_enrichment_celltype=CL:0000117!3.35e-18!23;CL:0000337!3.35e-18!23;CL:0000540!3.50e-14!33;CL:0000047!3.50e-14!33;CL:0000031!3.50e-14!33;CL:0000404!3.50e-14!33;CL:0000393!3.52e-12!39;CL:0000211!3.52e-12!39;CL:0000221!1.79e-11!44;CL:0000133!1.79e-11!44;CL:0002319!2.81e-11!43;CL:0000055!1.30e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.94e-45,23;CL:0000337,4.94e-45,23;CL:0000540,3.20e-30,33;CL:0000047,3.20e-30,33;CL:0000031,3.20e-30,33;CL:0000404,3.20e-30,33;CL:0000393,5.63e-25,39;CL:0000211,5.63e-25,39;CL:0002319,8.72e-25,43;CL:0000221,3.94e-24,44;CL:0000133,3.94e-24,44;CL:0002609,9.73e-18,6;CL:0002321,1.18e-13,70;CL:0000120,5.74e-11,3;CL:0002613,1.12e-10,3;CL:0002608,8.94e-10,3;CL:0000723,1.46e-09,91;CL:0000048,1.46e-09,91;CL:0002614,3.77e-09,3;CL:0000034,1.01e-08,97;CL:0002611,4.60e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.43e-14!73;UBERON:0005743!4.43e-14!73;UBERON:0002346!9.56e-14!71;UBERON:0003075!9.56e-14!71;UBERON:0007284!9.56e-14!71;UBERON:0000073!2.92e-13!75;UBERON:0001016!2.92e-13!75;UBERON:0004121!9.53e-13!102;UBERON:0000924!9.53e-13!102;UBERON:0006601!9.53e-13!102;UBERON:0001049!1.21e-12!52;UBERON:0005068!1.21e-12!52;UBERON:0006241!1.21e-12!52;UBERON:0007135!1.21e-12!52;UBERON:0003056!3.48e-11!49;UBERON:0000033!4.97e-11!63;UBERON:0002780!1.13e-09!39;UBERON:0001890!1.13e-09!39;UBERON:0006240!1.13e-09!39;UBERON:0002616!1.66e-09!49;UBERON:0003080!3.38e-09!40;UBERON:0000955!4.20e-09!50;UBERON:0006238!4.20e-09!50;UBERON:0000007!8.73e-09!8;UBERON:0003296!8.73e-09!8;UBERON:0010133!8.73e-09!8;UBERON:0002020!1.42e-07!34;UBERON:0001894!1.53e-07!10;UBERON:0006222!1.53e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.68e-30,52;UBERON:0005068,2.68e-30,52;UBERON:0006241,2.68e-30,52;UBERON:0007135,2.68e-30,52;UBERON:0001017,3.16e-29,73;UBERON:0000073,5.25e-29,54;UBERON:0002780,1.68e-28,39;UBERON:0001890,1.68e-28,39;UBERON:0006240,1.68e-28,39;UBERON:0001016,2.56e-28,75;UBERON:0003080,1.10e-27,40;UBERON:0000007,1.81e-25,8;UBERON:0003296,1.81e-25,8;UBERON:0010133,1.81e-25,8;UBERON:0002346,9.40e-24,64;UBERON:0003075,9.40e-24,64;UBERON:0007284,9.40e-24,64;UBERON:0002616,1.53e-23,46;UBERON:0000955,5.93e-23,47;UBERON:0006238,5.93e-23,47;UBERON:0003056,7.53e-22,49;UBERON:0004121,2.53e-21,95;UBERON:0000924,2.53e-21,95;UBERON:0006601,2.53e-21,95;UBERON:0010371,2.98e-20,73;UBERON:0001894,4.01e-20,10;UBERON:0006222,4.01e-20,10;UBERON:0002020,1.04e-19,34;UBERON:0010314,4.22e-15,92;UBERON:0002420,1.75e-13,8;UBERON:0007245,1.75e-13,8;UBERON:0010009,1.75e-13,8;UBERON:0010011,1.75e-13,8;UBERON:0000454,1.75e-13,8;UBERON:0003528,6.31e-13,29;UBERON:0002791,6.31e-13,29;UBERON:0001893,6.31e-13,29;UBERON:0000025,2.85e-11,114;UBERON:0004111,3.22e-10,122;UBERON:0001948,8.19e-10,5;UBERON:0002315,8.19e-10,5;UBERON:0002038,3.77e-09,3;UBERON:0009663,3.77e-09,3;UBERON:0009661,3.77e-09,3;UBERON:0000125,3.77e-09,3;UBERON:0002308,3.77e-09,3;UBERON:0002240,3.42e-08,6;UBERON:0005174,3.42e-08,6;UBERON:0001137,3.42e-08,6;UBERON:0011216,7.98e-08,194;UBERON:0002256,4.60e-07,2;UBERON:0002950,5.63e-07,4;UBERON:0001891,5.63e-07,4;UBERON:0009616,5.63e-07,4;UBERON:0010286,5.63e-07,4 | |||
|phase1_expression=0.480446541314382,0,0,0,0.500895729946347,0,0,0.129123323441576,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.218025156380447,0,0,0,0,0,0,0,0.257259436035947,0,0,6.87875966922632,11.6378015439847,9.50747105259269,0.338844532069132,0,0,0,0,0.299600110518405,1.53687322128622,2.7996195323289,5.13022565660425,2.10324961351382,4.28476476605705,2.87129103237098,3.1847607795888,2.30029130443767,4.5960939330501,0,0.510749352340751,0.307213066512487,7.38563211289086,8.69132614222892,6.77187381723788,1.95428099300967,2.25105044012672,2.13917546887534,2.06240009831567,0.854230084794618,3.16879057903011,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0.22836775943812,0,0,0.346970653532272,0.913396434936424,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,0,0.879580464790051,0,0,0,0.162241263067758,0,0.124406970610093,0,0,0.520481771850815,0.689706313300419,0.720248519221397,0.30140963567143,0.0680364991513279,0.12811372028485,0.468508622798644,0,0.431135985865684,0.378212160335639,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308713837137853,0,0,0.426576501070468,0,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0,0.568474235311454,0,0.169745085775188,0.234690248288502,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0,0,0,0.35163505977661,0,0.252470927204373,0,0,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0,0,0,0,0,0,0,0.242780636154981,0.302323556964751,0,0.590603785761546,0,0,0,0,0,0,0,6.12791290356818,3.42116078659489,2.97524972700335,6.85878512101095,11.5271151867478,9.98865378571595,6.91105886528908,10.0473433207818,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0.185194527369712,0,0,0,0,0,0,0,0.474503990371703,0,0.108005340821801,0.209088296014469,0,0,0,0.26175594198403,0,0,0,0.149516546043979,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0.726511433089237,0.798049746802062,1.02440163452481,0,0.209613162627982,0.367687016900028,0,0,0,0.505394423527595,0.50695859978048,0.188626341386076,0.37456602987953,0.192075457214608,0.459483751644906,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0,0.177475806159338,0.476872379894642,0,0.376437521661322,0.338458431566706,0.548783918618318,0.263069711437843,0.543216455383447,0,0.237270036248348,0.197008964751127,0,0.464810523557898,0.192906610981141,0.249810577937946,0.467863216890817,0,0,0,0 | |||
|short_description=p@chr2:157387588..157387620,- | |||
}} |
Revision as of 22:39, 13 September 2013
Short description: | p@chr2:157387588..157387620, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:157387588..157387620, - |
Coexpression cluster: | MCL_coexpression_mm9:470 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.94e-45 | 23 |
neuroblast (sensu Vertebrata) | 4.94e-45 | 23 |
neuron | 3.20e-30 | 33 |
neuronal stem cell | 3.20e-30 | 33 |
neuroblast | 3.20e-30 | 33 |
electrically signaling cell | 3.20e-30 | 33 |
electrically responsive cell | 5.63e-25 | 39 |
electrically active cell | 5.63e-25 | 39 |
neural cell | 8.72e-25 | 43 |
ectodermal cell | 3.94e-24 | 44 |
neurectodermal cell | 3.94e-24 | 44 |
neuron of cerebral cortex | 9.73e-18 | 6 |
embryonic cell | 1.18e-13 | 70 |
granule cell | 5.74e-11 | 3 |
striatum neuron | 1.12e-10 | 3 |
hippocampal neuron | 8.94e-10 | 3 |
somatic stem cell | 1.46e-09 | 91 |
multi fate stem cell | 1.46e-09 | 91 |
neuron of the substantia nigra | 3.77e-09 | 3 |
stem cell | 1.01e-08 | 97 |
neuron of the dorsal spinal cord | 4.60e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.