FFCP PHASE1:Mm9::chr2:157392030..157392041,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=53619|HGNC=|UniProt=|association_with_transcript=25bp_to_ENSMUST00000131902_5end|description=CAGE_peak_2_at_Blcap_5end|id=chr2:157392030..157392041,-|ontology_enrichment_celltype=CL:0000117!3.22e-11!23;CL:0000337!3.22e-11!23;CL:0000540!1.07e-07!33;CL:0000047!1.07e-07!33;CL:0000031!1.07e-07!33;CL:0000404!1.07e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,8.12e-13,23;CL:0000337,8.12e-13,23;CL:0000540,9.52e-08,33;CL:0000047,9.52e-08,33;CL:0000031,9.52e-08,33;CL:0000404,9.52e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.02e-17!52;UBERON:0005068!1.02e-17!52;UBERON:0006241!1.02e-17!52;UBERON:0007135!1.02e-17!52;UBERON:0000955!4.11e-17!50;UBERON:0006238!4.11e-17!50;UBERON:0002616!6.88e-17!49;UBERON:0003080!1.94e-16!40;UBERON:0001017!3.60e-16!73;UBERON:0005743!3.60e-16!73;UBERON:0002780!5.46e-16!39;UBERON:0001890!5.46e-16!39;UBERON:0006240!5.46e-16!39;UBERON:0000033!7.86e-16!63;UBERON:0003056!1.18e-15!49;UBERON:0000073!5.93e-15!75;UBERON:0001016!5.93e-15!75;UBERON:0002346!1.97e-14!71;UBERON:0003075!1.97e-14!71;UBERON:0007284!1.97e-14!71;UBERON:0004121!4.46e-13!102;UBERON:0000924!4.46e-13!102;UBERON:0006601!4.46e-13!102;UBERON:0002020!1.09e-11!34;UBERON:0002791!3.02e-10!29;UBERON:0003528!3.02e-10!29;UBERON:0001893!3.02e-10!29;UBERON:0001894!3.93e-07!10;UBERON:0006222!3.93e-07!10;UBERON:0007811!9.93e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.29e-21,54;UBERON:0001049,3.49e-20,52;UBERON:0005068,3.49e-20,52;UBERON:0006241,3.49e-20,52;UBERON:0007135,3.49e-20,52;UBERON:0003080,9.11e-19,40;UBERON:0000955,1.20e-18,47;UBERON:0006238,1.20e-18,47;UBERON:0002616,2.15e-18,46;UBERON:0002780,3.04e-18,39;UBERON:0001890,3.04e-18,39;UBERON:0006240,3.04e-18,39;UBERON:0003056,3.66e-18,49;UBERON:0002346,6.86e-18,64;UBERON:0003075,6.86e-18,64;UBERON:0007284,6.86e-18,64;UBERON:0001017,2.24e-17,73;UBERON:0001016,3.10e-16,75;UBERON:0010371,6.38e-15,73;UBERON:0004121,7.77e-14,95;UBERON:0000924,7.77e-14,95;UBERON:0006601,7.77e-14,95;UBERON:0002020,3.05e-13,34;UBERON:0003528,1.45e-11,29;UBERON:0002791,1.45e-11,29;UBERON:0001893,1.45e-11,29;UBERON:0010314,4.20e-08,92;UBERON:0001894,4.65e-08,10;UBERON:0006222,4.65e-08,10;UBERON:0000007,5.17e-07,8;UBERON:0003296,5.17e-07,8;UBERON:0010133,5.17e-07,8;UBERON:0002420,6.38e-07,8;UBERON:0007245,6.38e-07,8;UBERON:0010009,6.38e-07,8;UBERON:0010011,6.38e-07,8;UBERON:0000454,6.38e-07,8|phase1_expression=2.24208385946712,8.72438519098403,11.8299802241279,8.77146212789807,6.01074875935617,2.18243053485457,2.10251376535973,0.258246646883153,2.111830832275,2.57470978954193,0,0.0797721589953364,0.171200729931206,0.262261207256992,0,0,0,0,0,0,1.19060606211498,0,0,2.71987118748791,5.50582274561208,5.16808767703518,7.75371593086335,6.24866574789078,3.23039813075836,2.52030129759931,4.21287970245079,1.27006134691926,0.61506478758457,0,0.577703239502549,0.332469290716985,0,2.09265815368454,0.7813353445238,0.523523743973798,7.05877785637217,5.46436387966757,1.94204141212461,0.629484089877886,0.912392380975631,1.83546752161682,9.38869613217647,0.218025156380447,0.439372365468944,1.55543919259427,0.419959264876088,0,0.167782606057736,0.725362142011344,0.336093799142464,1.02903774414379,0.573066879877513,0.515672092277442,11.1274053472779,20.1016572123373,14.5781222806421,5.08266798103698,0.889294796111139,0.449949858640699,0,2.1314403448383,0.599200221036809,2.30530983192933,3.21437798156281,3.37514845829227,2.94454945891935,1.71390590642282,1.76694832761291,5.75706756310284,4.98396449294829,7.35375029288017,1.10115880999389,4.59674417106676,3.37934373163736,19.2553980086083,17.8400905024699,17.1901412283731,3.62937898701795,9.56696437053856,7.18151764551008,4.12480019663135,4.55589378557129,5.96478226640962,0.075726193333184,0.377857800533928,0,1.72084775396277,6.11974200336975,2.15881276655127,0,0.896053774194671,0.421333260395256,0.511290967734173,0.259786004602869,0.35333957451034,0.845060518660083,1.28326477414318,0,0,1.94841936910093,2.28023878927589,2.02209778005913,1.1418387971906,0.258937883647172,0.890652834388949,2.25530924795977,0.608930956624282,0,0.60289056221049,1.88141931417128,0.879666139307728,5.93267922562497,6.65157041831594,0.884610551949874,0.323533699894818,1.10420759230197,0,0,0.585561594023094,1.25668024088073,4.08731288333746,1.1981512450592,0,0.889491589511453,4.04434726393021,4.57500602818627,12.4397808591736,2.9550134432687,3.83573185995496,5.40248915854856,4.86723789203273,0.611036183101898,1.11966273549084,0.252722758433675,0.210441855886474,1.17108398666433,2.29902104433473,1.62055916824814,2.56198190320716,3.12967896096108,2.8185018462667,1.40552586839593,0.258703370739016,1.94011193639558,1.51284864134255,1.75951124163949,0.657587197282725,0.556094498451196,0.348252166522167,0.205782136407943,0.398068533636986,0,1.54408744268829,0.284163499395593,0.414251545071004,0.469052119962192,0.36012412292203,0.473489471170421,0,0.154267112887378,0.465067889500816,0.268273401399619,0.116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| ||
|EntrezGene=53619 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=25bp_to_ENSMUST00000131902_5end | |||
|description=CAGE_peak_2_at_Blcap_5end | |||
|id=chr2:157392030..157392041,- | |||
|ontology_enrichment_celltype=CL:0000117!3.22e-11!23;CL:0000337!3.22e-11!23;CL:0000540!1.07e-07!33;CL:0000047!1.07e-07!33;CL:0000031!1.07e-07!33;CL:0000404!1.07e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.12e-13,23;CL:0000337,8.12e-13,23;CL:0000540,9.52e-08,33;CL:0000047,9.52e-08,33;CL:0000031,9.52e-08,33;CL:0000404,9.52e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.02e-17!52;UBERON:0005068!1.02e-17!52;UBERON:0006241!1.02e-17!52;UBERON:0007135!1.02e-17!52;UBERON:0000955!4.11e-17!50;UBERON:0006238!4.11e-17!50;UBERON:0002616!6.88e-17!49;UBERON:0003080!1.94e-16!40;UBERON:0001017!3.60e-16!73;UBERON:0005743!3.60e-16!73;UBERON:0002780!5.46e-16!39;UBERON:0001890!5.46e-16!39;UBERON:0006240!5.46e-16!39;UBERON:0000033!7.86e-16!63;UBERON:0003056!1.18e-15!49;UBERON:0000073!5.93e-15!75;UBERON:0001016!5.93e-15!75;UBERON:0002346!1.97e-14!71;UBERON:0003075!1.97e-14!71;UBERON:0007284!1.97e-14!71;UBERON:0004121!4.46e-13!102;UBERON:0000924!4.46e-13!102;UBERON:0006601!4.46e-13!102;UBERON:0002020!1.09e-11!34;UBERON:0002791!3.02e-10!29;UBERON:0003528!3.02e-10!29;UBERON:0001893!3.02e-10!29;UBERON:0001894!3.93e-07!10;UBERON:0006222!3.93e-07!10;UBERON:0007811!9.93e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.29e-21,54;UBERON:0001049,3.49e-20,52;UBERON:0005068,3.49e-20,52;UBERON:0006241,3.49e-20,52;UBERON:0007135,3.49e-20,52;UBERON:0003080,9.11e-19,40;UBERON:0000955,1.20e-18,47;UBERON:0006238,1.20e-18,47;UBERON:0002616,2.15e-18,46;UBERON:0002780,3.04e-18,39;UBERON:0001890,3.04e-18,39;UBERON:0006240,3.04e-18,39;UBERON:0003056,3.66e-18,49;UBERON:0002346,6.86e-18,64;UBERON:0003075,6.86e-18,64;UBERON:0007284,6.86e-18,64;UBERON:0001017,2.24e-17,73;UBERON:0001016,3.10e-16,75;UBERON:0010371,6.38e-15,73;UBERON:0004121,7.77e-14,95;UBERON:0000924,7.77e-14,95;UBERON:0006601,7.77e-14,95;UBERON:0002020,3.05e-13,34;UBERON:0003528,1.45e-11,29;UBERON:0002791,1.45e-11,29;UBERON:0001893,1.45e-11,29;UBERON:0010314,4.20e-08,92;UBERON:0001894,4.65e-08,10;UBERON:0006222,4.65e-08,10;UBERON:0000007,5.17e-07,8;UBERON:0003296,5.17e-07,8;UBERON:0010133,5.17e-07,8;UBERON:0002420,6.38e-07,8;UBERON:0007245,6.38e-07,8;UBERON:0010009,6.38e-07,8;UBERON:0010011,6.38e-07,8;UBERON:0000454,6.38e-07,8 | |||
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| |||
|short_description=p2@Blcap | |||
}} |
Revision as of 22:39, 13 September 2013
Short description: | p2@Blcap |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Blcap_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENSMUST00000131902_5end |
EntrezGene: | Blcap |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.12e-13 | 23 |
neuroblast (sensu Vertebrata) | 8.12e-13 | 23 |
neuron | 9.52e-08 | 33 |
neuronal stem cell | 9.52e-08 | 33 |
neuroblast | 9.52e-08 | 33 |
electrically signaling cell | 9.52e-08 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.