FFCP PHASE1:Mm9::chr2:178062307..178062318,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=74189|HGNC=|MCL_coexpression_id=22|UniProt=|association_with_transcript=46bp_to_ENSMUST00000141272_5end|description=CAGE_peak_15_at_Phactr3_5end|id=chr2:178062307..178062318,+|ontology_enrichment_celltype=CL:0000117!2.37e-16!23;CL:0000337!2.37e-16!23;CL:0000540!1.60e-13!33;CL:0000047!1.60e-13!33;CL:0000031!1.60e-13!33;CL:0000404!1.60e-13!33;CL:0002319!3.02e-10!43;CL:0000393!3.70e-10!39;CL:0000211!3.70e-10!39;CL:0000221!8.07e-10!44;CL:0000133!8.07e-10!44;CL:0000055!1.18e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.10e-26,23;CL:0000337,3.10e-26,23;CL:0002613,1.72e-19,3;CL:0000540,5.48e-18,33;CL:0000047,5.48e-18,33;CL:0000031,5.48e-18,33;CL:0000404,5.48e-18,33;CL:0000393,4.63e-15,39;CL:0000211,4.63e-15,39;CL:0002319,1.47e-13,43;CL:0000221,3.15e-13,44;CL:0000133,3.15e-13,44;CL:0002608,1.97e-09,3;CL:0002612,3.19e-09,3;CL:0002321,6.85e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.10e-16!73;UBERON:0005743!1.10e-16!73;UBERON:0000073!1.35e-16!75;UBERON:0001016!1.35e-16!75;UBERON:0001049!1.82e-15!52;UBERON:0005068!1.82e-15!52;UBERON:0006241!1.82e-15!52;UBERON:0007135!1.82e-15!52;UBERON:0002346!3.08e-14!71;UBERON:0003075!3.08e-14!71;UBERON:0007284!3.08e-14!71;UBERON:0004121!8.36e-13!102;UBERON:0000924!8.36e-13!102;UBERON:0006601!8.36e-13!102;UBERON:0000955!4.30e-12!50;UBERON:0006238!4.30e-12!50;UBERON:0002020!5.53e-12!34;UBERON:0002616!1.75e-11!49;UBERON:0003080!2.77e-10!40;UBERON:0000033!3.96e-10!63;UBERON:0002780!1.26e-09!39;UBERON:0001890!1.26e-09!39;UBERON:0006240!1.26e-09!39;UBERON:0003056!6.02e-09!49;UBERON:0000025!2.46e-08!114;UBERON:0002791!5.81e-08!29;UBERON:0003528!5.81e-08!29;UBERON:0001893!5.81e-08!29;UBERON:0004111!7.66e-08!122;UBERON:0002240!2.79e-07!6;UBERON:0005174!2.79e-07!6;UBERON:0001137!2.79e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.01e-20,5;UBERON:0002435,1.01e-20,5;UBERON:0000204,1.01e-20,5;UBERON:0010082,1.01e-20,5;UBERON:0002020,1.54e-17,34;UBERON:0000073,1.36e-15,54;UBERON:0001049,1.36e-13,52;UBERON:0005068,1.36e-13,52;UBERON:0006241,1.36e-13,52;UBERON:0007135,1.36e-13,52;UBERON:0001017,2.21e-13,73;UBERON:0002420,4.56e-13,8;UBERON:0007245,4.56e-13,8;UBERON:0010009,4.56e-13,8;UBERON:0010011,4.56e-13,8;UBERON:0000454,4.56e-13,8;UBERON:0001016,5.47e-13,75;UBERON:0001948,1.01e-11,5;UBERON:0002315,1.01e-11,5;UBERON:0002346,8.27e-11,64;UBERON:0003075,8.27e-11,64;UBERON:0007284,8.27e-11,64;UBERON:0003528,2.81e-10,29;UBERON:0002791,2.81e-10,29;UBERON:0001893,2.81e-10,29;UBERON:0004121,5.98e-10,95;UBERON:0000924,5.98e-10,95;UBERON:0006601,5.98e-10,95;UBERON:0002240,7.26e-10,6;UBERON:0005174,7.26e-10,6;UBERON:0001137,7.26e-10,6;UBERON:0010371,2.57e-09,73;UBERON:0002257,3.19e-09,3;UBERON:0003076,1.20e-08,12;UBERON:0003057,1.20e-08,12;UBERON:0010314,1.43e-08,92;UBERON:0002616,3.52e-08,46;UBERON:0000955,5.48e-08,47;UBERON:0006238,5.48e-08,47;UBERON:0002780,1.73e-07,39;UBERON:0001890,1.73e-07,39;UBERON:0006240,1.73e-07,39;UBERON:0003080,2.75e-07,40|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0.42438965179803,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,5.07065122804943,0,0,0,0,0,0.599200221036809,0,0.311068836925433,0.810035629990144,0.210324961351382,0.856952953211411,1.32521124570968,1.5923803897944,1.53352753629178,0.919218786610021,1.10115880999389,0,0.153606533256243,1.05509030184155,1.82975287204819,1.56274011167028,0.837548997004143,0,0.45839474333043,1.47314292736834,1.42371680799103,0.931997229126503,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0.150722640552623,0.352766121407114,0.251333182659351,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.449371918214468,0,4.02093926761166,0.173824320192276,0.511430914660661,0.20778804455956,0.973447578406546,0.101839363850316,0,0,0,0,0,0,0,0.0680364991513279,0.2562274405697,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,1.03562886267751,0.469052119962192,0.540186184383045,0.23674473558521,0.983821158737019,0.308534225774757,0.232533944750408,0,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.134206418760372,0.210289948564127,0.720332286654991,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,1.87538698547525,0,0,0,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0.178368817602071,0.822745103010605,0.304464949114599,0,0,0,0,0,0,0,0,0.291480836629851,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,1.6942555278512,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0,0.188626341386076,0,0.320125762024346,0.287177344778066,0,0.115884325944855,0,0,0.735994600671987,0,0.354951612318675,0.476872379894642,0.290692833264657,0.188218760830661,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0.237270036248348,0.197008964751127,0,0.309873682371932,0.385813221962283,0,0,0,0,0,0|short_description=p15@Phactr3}} | ||
|EntrezGene=74189 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt= | |||
|association_with_transcript=46bp_to_ENSMUST00000141272_5end | |||
|description=CAGE_peak_15_at_Phactr3_5end | |||
|id=chr2:178062307..178062318,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.37e-16!23;CL:0000337!2.37e-16!23;CL:0000540!1.60e-13!33;CL:0000047!1.60e-13!33;CL:0000031!1.60e-13!33;CL:0000404!1.60e-13!33;CL:0002319!3.02e-10!43;CL:0000393!3.70e-10!39;CL:0000211!3.70e-10!39;CL:0000221!8.07e-10!44;CL:0000133!8.07e-10!44;CL:0000055!1.18e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.10e-26,23;CL:0000337,3.10e-26,23;CL:0002613,1.72e-19,3;CL:0000540,5.48e-18,33;CL:0000047,5.48e-18,33;CL:0000031,5.48e-18,33;CL:0000404,5.48e-18,33;CL:0000393,4.63e-15,39;CL:0000211,4.63e-15,39;CL:0002319,1.47e-13,43;CL:0000221,3.15e-13,44;CL:0000133,3.15e-13,44;CL:0002608,1.97e-09,3;CL:0002612,3.19e-09,3;CL:0002321,6.85e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.10e-16!73;UBERON:0005743!1.10e-16!73;UBERON:0000073!1.35e-16!75;UBERON:0001016!1.35e-16!75;UBERON:0001049!1.82e-15!52;UBERON:0005068!1.82e-15!52;UBERON:0006241!1.82e-15!52;UBERON:0007135!1.82e-15!52;UBERON:0002346!3.08e-14!71;UBERON:0003075!3.08e-14!71;UBERON:0007284!3.08e-14!71;UBERON:0004121!8.36e-13!102;UBERON:0000924!8.36e-13!102;UBERON:0006601!8.36e-13!102;UBERON:0000955!4.30e-12!50;UBERON:0006238!4.30e-12!50;UBERON:0002020!5.53e-12!34;UBERON:0002616!1.75e-11!49;UBERON:0003080!2.77e-10!40;UBERON:0000033!3.96e-10!63;UBERON:0002780!1.26e-09!39;UBERON:0001890!1.26e-09!39;UBERON:0006240!1.26e-09!39;UBERON:0003056!6.02e-09!49;UBERON:0000025!2.46e-08!114;UBERON:0002791!5.81e-08!29;UBERON:0003528!5.81e-08!29;UBERON:0001893!5.81e-08!29;UBERON:0004111!7.66e-08!122;UBERON:0002240!2.79e-07!6;UBERON:0005174!2.79e-07!6;UBERON:0001137!2.79e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.01e-20,5;UBERON:0002435,1.01e-20,5;UBERON:0000204,1.01e-20,5;UBERON:0010082,1.01e-20,5;UBERON:0002020,1.54e-17,34;UBERON:0000073,1.36e-15,54;UBERON:0001049,1.36e-13,52;UBERON:0005068,1.36e-13,52;UBERON:0006241,1.36e-13,52;UBERON:0007135,1.36e-13,52;UBERON:0001017,2.21e-13,73;UBERON:0002420,4.56e-13,8;UBERON:0007245,4.56e-13,8;UBERON:0010009,4.56e-13,8;UBERON:0010011,4.56e-13,8;UBERON:0000454,4.56e-13,8;UBERON:0001016,5.47e-13,75;UBERON:0001948,1.01e-11,5;UBERON:0002315,1.01e-11,5;UBERON:0002346,8.27e-11,64;UBERON:0003075,8.27e-11,64;UBERON:0007284,8.27e-11,64;UBERON:0003528,2.81e-10,29;UBERON:0002791,2.81e-10,29;UBERON:0001893,2.81e-10,29;UBERON:0004121,5.98e-10,95;UBERON:0000924,5.98e-10,95;UBERON:0006601,5.98e-10,95;UBERON:0002240,7.26e-10,6;UBERON:0005174,7.26e-10,6;UBERON:0001137,7.26e-10,6;UBERON:0010371,2.57e-09,73;UBERON:0002257,3.19e-09,3;UBERON:0003076,1.20e-08,12;UBERON:0003057,1.20e-08,12;UBERON:0010314,1.43e-08,92;UBERON:0002616,3.52e-08,46;UBERON:0000955,5.48e-08,47;UBERON:0006238,5.48e-08,47;UBERON:0002780,1.73e-07,39;UBERON:0001890,1.73e-07,39;UBERON:0006240,1.73e-07,39;UBERON:0003080,2.75e-07,40 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0.42438965179803,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,0,5.07065122804943,0,0,0,0,0,0.599200221036809,0,0.311068836925433,0.810035629990144,0.210324961351382,0.856952953211411,1.32521124570968,1.5923803897944,1.53352753629178,0.919218786610021,1.10115880999389,0,0.153606533256243,1.05509030184155,1.82975287204819,1.56274011167028,0.837548997004143,0,0.45839474333043,1.47314292736834,1.42371680799103,0.931997229126503,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0.150722640552623,0.352766121407114,0.251333182659351,0,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.449371918214468,0,4.02093926761166,0.173824320192276,0.511430914660661,0.20778804455956,0.973447578406546,0.101839363850316,0,0,0,0,0,0,0,0.0680364991513279,0.2562274405697,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,1.03562886267751,0.469052119962192,0.540186184383045,0.23674473558521,0.983821158737019,0.308534225774757,0.232533944750408,0,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0,0.134206418760372,0.210289948564127,0.720332286654991,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,1.87538698547525,0,0,0,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0.178368817602071,0.822745103010605,0.304464949114599,0,0,0,0,0,0,0,0,0.291480836629851,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,1.6942555278512,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0,0.188626341386076,0,0.320125762024346,0.287177344778066,0,0.115884325944855,0,0,0.735994600671987,0,0.354951612318675,0.476872379894642,0.290692833264657,0.188218760830661,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0.237270036248348,0.197008964751127,0,0.309873682371932,0.385813221962283,0,0,0,0,0,0 | |||
|short_description=p15@Phactr3 | |||
}} |
Revision as of 23:09, 13 September 2013
Short description: | p15@Phactr3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_Phactr3_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 46bp_to_ENSMUST00000141272_5end |
EntrezGene: | Phactr3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.10e-26 | 23 |
neuroblast (sensu Vertebrata) | 3.10e-26 | 23 |
striatum neuron | 1.72e-19 | 3 |
neuron | 5.48e-18 | 33 |
neuronal stem cell | 5.48e-18 | 33 |
neuroblast | 5.48e-18 | 33 |
electrically signaling cell | 5.48e-18 | 33 |
electrically responsive cell | 4.63e-15 | 39 |
electrically active cell | 4.63e-15 | 39 |
neural cell | 1.47e-13 | 43 |
ectodermal cell | 3.15e-13 | 44 |
neurectodermal cell | 3.15e-13 | 44 |
hippocampal neuron | 1.97e-09 | 3 |
neuron of the ventral spinal cord | 3.19e-09 | 3 |
embryonic cell | 6.85e-08 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.