FFCP PHASE1:Mm9::chr2:29701161..29701165,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=723904|HGNC=|MCL_coexpression_id=270|UniProt=|association_with_transcript=81bp_to_NR_029838,uc012btj.1_5end|description=CAGE_peak_1_at_Mir219-2_5end|id=chr2:29701161..29701165,-|ontology_enrichment_celltype=CL:0000117!1.26e-09!23;CL:0000337!1.26e-09!23;CL:0002614!1.17e-07!3|ontology_enrichment_celltype_v019_2=CL:0000117,2.07e-14,23;CL:0000337,2.07e-14,23;CL:0002614,5.49e-14,3;CL:0002611,1.47e-10,2;CL:0000540,1.16e-09,33;CL:0000047,1.16e-09,33;CL:0000031,1.16e-09,33;CL:0000404,1.16e-09,33;CL:0000393,5.60e-08,39;CL:0000211,5.60e-08,39;CL:0002319,4.06e-07,43;CL:0000221,6.31e-07,44;CL:0000133,6.31e-07,44;CL:0002610,8.40e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.49e-25!73;UBERON:0005743!1.49e-25!73;UBERON:0001049!9.09e-25!52;UBERON:0005068!9.09e-25!52;UBERON:0006241!9.09e-25!52;UBERON:0007135!9.09e-25!52;UBERON:0000073!1.17e-24!75;UBERON:0001016!1.17e-24!75;UBERON:0000955!1.52e-21!50;UBERON:0006238!1.52e-21!50;UBERON:0002616!3.57e-20!49;UBERON:0002020!1.57e-18!34;UBERON:0004121!1.58e-18!102;UBERON:0000924!1.58e-18!102;UBERON:0006601!1.58e-18!102;UBERON:0002346!1.07e-17!71;UBERON:0003075!1.07e-17!71;UBERON:0007284!1.07e-17!71;UBERON:0000033!3.22e-17!63;UBERON:0002298!4.69e-14!6;UBERON:0003076!9.67e-14!12;UBERON:0003057!9.67e-14!12;UBERON:0003080!2.08e-13!40;UBERON:0002791!3.36e-13!29;UBERON:0003528!3.36e-13!29;UBERON:0001893!3.36e-13!29;UBERON:0002021!1.88e-12!10;UBERON:0000411!1.88e-12!10;UBERON:0001950!1.88e-12!10;UBERON:0002780!4.50e-12!39;UBERON:0001890!4.50e-12!39;UBERON:0006240!4.50e-12!39;UBERON:0003056!2.20e-11!49;UBERON:0007811!6.85e-11!86;UBERON:0002619!2.25e-10!17;UBERON:0002950!9.69e-10!4;UBERON:0001891!9.69e-10!4;UBERON:0009616!9.69e-10!4;UBERON:0000956!9.88e-10!21;UBERON:0001869!9.88e-10!21;UBERON:0000203!9.88e-10!21;UBERON:0002240!1.76e-09!6;UBERON:0005174!1.76e-09!6;UBERON:0001137!1.76e-09!6;UBERON:0000153!1.98e-09!94;UBERON:0000025!1.14e-07!114;UBERON:0002038!1.17e-07!3;UBERON:0002308!1.17e-07!3;UBERON:0009663!1.17e-07!3;UBERON:0009661!1.17e-07!3;UBERON:0006331!1.17e-07!3;UBERON:0000125!1.17e-07!3;UBERON:0001948!1.99e-07!5;UBERON:0002315!1.99e-07!5;UBERON:0004111!9.41e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.72e-21,54;UBERON:0001049,8.69e-20,52;UBERON:0005068,8.69e-20,52;UBERON:0006241,8.69e-20,52;UBERON:0007135,8.69e-20,52;UBERON:0001017,1.64e-19,73;UBERON:0001016,6.43e-19,75;UBERON:0002950,3.18e-18,4;UBERON:0001891,3.18e-18,4;UBERON:0009616,3.18e-18,4;UBERON:0010286,3.18e-18,4;UBERON:0002346,1.33e-15,64;UBERON:0003075,1.33e-15,64;UBERON:0007284,1.33e-15,64;UBERON:0004121,2.38e-14,95;UBERON:0000924,2.38e-14,95;UBERON:0006601,2.38e-14,95;UBERON:0002038,5.49e-14,3;UBERON:0009663,5.49e-14,3;UBERON:0009661,5.49e-14,3;UBERON:0000125,5.49e-14,3;UBERON:0002308,5.49e-14,3;UBERON:0003076,1.42e-13,12;UBERON:0003057,1.42e-13,12;UBERON:0010371,2.32e-13,73;UBERON:0002240,1.43e-12,6;UBERON:0005174,1.43e-12,6;UBERON:0001137,1.43e-12,6;UBERON:0002616,3.75e-12,46;UBERON:0000955,7.49e-12,47;UBERON:0006238,7.49e-12,47;UBERON:0002020,1.40e-11,34;UBERON:0002256,1.47e-10,2;UBERON:0001896,1.82e-10,2;UBERON:0002298,1.82e-10,2;UBERON:0005290,1.82e-10,2;UBERON:0010096,1.82e-10,2;UBERON:0010314,4.64e-10,92;UBERON:0003080,1.28e-09,40;UBERON:0002420,3.86e-09,8;UBERON:0007245,3.86e-09,8;UBERON:0010009,3.86e-09,8;UBERON:0010011,3.86e-09,8;UBERON:0000454,3.86e-09,8;UBERON:0001948,8.33e-09,5;UBERON:0002315,8.33e-09,5;UBERON:0002780,6.10e-08,39;UBERON:0001890,6.10e-08,39;UBERON:0006240,6.10e-08,39;UBERON:0000025,1.34e-07,114;UBERON:0003056,1.42e-07,49;UBERON:0004111,6.35e-07,122;UBERON:0004684,8.40e-07,3;UBERON:0002275,8.40e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0,0,0,0,0,0,0,0.384218305321555,0,0,0,4.85606673486466,7.50953039235486,0,0,0,0,1.53224805702225,2.30409799884365,0,0,0,8.09630697104005,1.12552522006336,1.68078072554491,0.294628585473668,1.13897344639282,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,2.69623150928681,1.83000241127451,0,0.521472960576829,1.53429274398198,2.28566849015516,3.24482526135515,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,3.53211297973142,5.62616095642575,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.00648315428376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,1.71868654031819,0.68741272937475,0.685082519770642,1.5107877947794,0,1.35096360967266,0,0.51776031175182,0.415149390336707,0.798049746802062,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0.463735671240843|short_description=p1@Mir219-2}} | ||
|EntrezGene=723904 | |||
|HGNC= | |||
|MCL_coexpression_id=270 | |||
|UniProt= | |||
|association_with_transcript=81bp_to_NR_029838,uc012btj.1_5end | |||
|description=CAGE_peak_1_at_Mir219-2_5end | |||
|id=chr2:29701161..29701165,- | |||
|ontology_enrichment_celltype=CL:0000117!1.26e-09!23;CL:0000337!1.26e-09!23;CL:0002614!1.17e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.07e-14,23;CL:0000337,2.07e-14,23;CL:0002614,5.49e-14,3;CL:0002611,1.47e-10,2;CL:0000540,1.16e-09,33;CL:0000047,1.16e-09,33;CL:0000031,1.16e-09,33;CL:0000404,1.16e-09,33;CL:0000393,5.60e-08,39;CL:0000211,5.60e-08,39;CL:0002319,4.06e-07,43;CL:0000221,6.31e-07,44;CL:0000133,6.31e-07,44;CL:0002610,8.40e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.49e-25!73;UBERON:0005743!1.49e-25!73;UBERON:0001049!9.09e-25!52;UBERON:0005068!9.09e-25!52;UBERON:0006241!9.09e-25!52;UBERON:0007135!9.09e-25!52;UBERON:0000073!1.17e-24!75;UBERON:0001016!1.17e-24!75;UBERON:0000955!1.52e-21!50;UBERON:0006238!1.52e-21!50;UBERON:0002616!3.57e-20!49;UBERON:0002020!1.57e-18!34;UBERON:0004121!1.58e-18!102;UBERON:0000924!1.58e-18!102;UBERON:0006601!1.58e-18!102;UBERON:0002346!1.07e-17!71;UBERON:0003075!1.07e-17!71;UBERON:0007284!1.07e-17!71;UBERON:0000033!3.22e-17!63;UBERON:0002298!4.69e-14!6;UBERON:0003076!9.67e-14!12;UBERON:0003057!9.67e-14!12;UBERON:0003080!2.08e-13!40;UBERON:0002791!3.36e-13!29;UBERON:0003528!3.36e-13!29;UBERON:0001893!3.36e-13!29;UBERON:0002021!1.88e-12!10;UBERON:0000411!1.88e-12!10;UBERON:0001950!1.88e-12!10;UBERON:0002780!4.50e-12!39;UBERON:0001890!4.50e-12!39;UBERON:0006240!4.50e-12!39;UBERON:0003056!2.20e-11!49;UBERON:0007811!6.85e-11!86;UBERON:0002619!2.25e-10!17;UBERON:0002950!9.69e-10!4;UBERON:0001891!9.69e-10!4;UBERON:0009616!9.69e-10!4;UBERON:0000956!9.88e-10!21;UBERON:0001869!9.88e-10!21;UBERON:0000203!9.88e-10!21;UBERON:0002240!1.76e-09!6;UBERON:0005174!1.76e-09!6;UBERON:0001137!1.76e-09!6;UBERON:0000153!1.98e-09!94;UBERON:0000025!1.14e-07!114;UBERON:0002038!1.17e-07!3;UBERON:0002308!1.17e-07!3;UBERON:0009663!1.17e-07!3;UBERON:0009661!1.17e-07!3;UBERON:0006331!1.17e-07!3;UBERON:0000125!1.17e-07!3;UBERON:0001948!1.99e-07!5;UBERON:0002315!1.99e-07!5;UBERON:0004111!9.41e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.72e-21,54;UBERON:0001049,8.69e-20,52;UBERON:0005068,8.69e-20,52;UBERON:0006241,8.69e-20,52;UBERON:0007135,8.69e-20,52;UBERON:0001017,1.64e-19,73;UBERON:0001016,6.43e-19,75;UBERON:0002950,3.18e-18,4;UBERON:0001891,3.18e-18,4;UBERON:0009616,3.18e-18,4;UBERON:0010286,3.18e-18,4;UBERON:0002346,1.33e-15,64;UBERON:0003075,1.33e-15,64;UBERON:0007284,1.33e-15,64;UBERON:0004121,2.38e-14,95;UBERON:0000924,2.38e-14,95;UBERON:0006601,2.38e-14,95;UBERON:0002038,5.49e-14,3;UBERON:0009663,5.49e-14,3;UBERON:0009661,5.49e-14,3;UBERON:0000125,5.49e-14,3;UBERON:0002308,5.49e-14,3;UBERON:0003076,1.42e-13,12;UBERON:0003057,1.42e-13,12;UBERON:0010371,2.32e-13,73;UBERON:0002240,1.43e-12,6;UBERON:0005174,1.43e-12,6;UBERON:0001137,1.43e-12,6;UBERON:0002616,3.75e-12,46;UBERON:0000955,7.49e-12,47;UBERON:0006238,7.49e-12,47;UBERON:0002020,1.40e-11,34;UBERON:0002256,1.47e-10,2;UBERON:0001896,1.82e-10,2;UBERON:0002298,1.82e-10,2;UBERON:0005290,1.82e-10,2;UBERON:0010096,1.82e-10,2;UBERON:0010314,4.64e-10,92;UBERON:0003080,1.28e-09,40;UBERON:0002420,3.86e-09,8;UBERON:0007245,3.86e-09,8;UBERON:0010009,3.86e-09,8;UBERON:0010011,3.86e-09,8;UBERON:0000454,3.86e-09,8;UBERON:0001948,8.33e-09,5;UBERON:0002315,8.33e-09,5;UBERON:0002780,6.10e-08,39;UBERON:0001890,6.10e-08,39;UBERON:0006240,6.10e-08,39;UBERON:0000025,1.34e-07,114;UBERON:0003056,1.42e-07,49;UBERON:0004111,6.35e-07,122;UBERON:0004684,8.40e-07,3;UBERON:0002275,8.40e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0,0,0,0,0,0,0,0.384218305321555,0,0,0,4.85606673486466,7.50953039235486,0,0,0,0,1.53224805702225,2.30409799884365,0,0,0,8.09630697104005,1.12552522006336,1.68078072554491,0.294628585473668,1.13897344639282,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,2.69623150928681,1.83000241127451,0,0.521472960576829,1.53429274398198,2.28566849015516,3.24482526135515,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.102904612379284,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,3.53211297973142,5.62616095642575,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.00648315428376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,1.71868654031819,0.68741272937475,0.685082519770642,1.5107877947794,0,1.35096360967266,0,0.51776031175182,0.415149390336707,0.798049746802062,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0.463735671240843 | |||
|short_description=p1@Mir219-2 | |||
}} |
Revision as of 23:39, 13 September 2013
Short description: | p1@Mir219-2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mir219-2_5end |
Coexpression cluster: | MCL_coexpression_mm9:270 |
Association with transcript: | 81bp_to_NR_029838, uc012btj.1_5end |
EntrezGene: | Mir219-2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.07e-14 | 23 |
neuroblast (sensu Vertebrata) | 2.07e-14 | 23 |
neuron of the substantia nigra | 5.49e-14 | 3 |
neuron of the dorsal spinal cord | 1.47e-10 | 2 |
neuron | 1.16e-09 | 33 |
neuronal stem cell | 1.16e-09 | 33 |
neuroblast | 1.16e-09 | 33 |
electrically signaling cell | 1.16e-09 | 33 |
electrically responsive cell | 5.60e-08 | 39 |
electrically active cell | 5.60e-08 | 39 |
neural cell | 4.06e-07 | 43 |
ectodermal cell | 6.31e-07 | 44 |
neurectodermal cell | 6.31e-07 | 44 |
raphe nuclei neuron | 8.40e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.