FFCP PHASE1:Mm9::chr3:115591126..115591151,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=69740|HGNC=|MCL_coexpression_id=18|UniProt=Q6PAC5,Q8BG20|association_with_transcript=25bp_to_ENSMUST00000043342,NM_027193,uc008rbr.1,uc008rbs.1_5end|description=CAGE_peak_2_at_Dph5_5end|id=chr3:115591126..115591151,+|ontology_enrichment_celltype=CL:0000988!9.69e-12!32;CL:0002032!9.69e-12!32;CL:0000037!9.69e-12!32;CL:0000566!9.69e-12!32;CL:0000837!9.69e-12!32;CL:0002031!2.01e-09!25;CL:0000034!8.97e-09!97;CL:0000838!2.22e-08!12;CL:0000084!1.03e-07!11;CL:0000827!1.03e-07!11;CL:0000542!3.25e-07!13;CL:0000051!3.25e-07!13;CL:0002320!3.67e-07!46;CL:0000134!3.67e-07!46;CL:0000791!9.19e-07!9;CL:0000789!9.19e-07!9;CL:0002420!9.19e-07!9;CL:0002419!9.19e-07!9;CL:0000790!9.19e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,3.92e-19,32;CL:0002032,3.92e-19,32;CL:0000037,3.92e-19,32;CL:0000837,3.92e-19,32;CL:0002031,4.04e-15,25;CL:0002320,5.65e-13,46;CL:0000134,5.65e-13,46;CL:0000838,5.51e-12,12;CL:0000219,3.01e-11,54;CL:0000034,4.29e-11,97;CL:0000084,5.75e-11,11;CL:0000827,5.75e-11,11;CL:0000542,1.03e-10,13;CL:0000051,1.03e-10,13;CL:0000049,1.02e-09,19;CL:0000791,1.60e-09,9;CL:0000789,1.60e-09,9;CL:0002420,1.60e-09,9;CL:0002419,1.60e-09,9;CL:0000790,1.60e-09,9;CL:0000738,1.24e-08,17;CL:0002087,1.24e-08,17;CL:0000624,1.61e-08,8;CL:0000723,9.30e-08,91;CL:0000048,9.30e-08,91;CL:0000763,3.24e-07,16;CL:0000050,5.49e-07,9;CL:0000893,8.76e-07,6;CL:0002489,8.76e-07,6;CL:0000898,8.76e-07,6;CL:0000809,8.76e-07,6;CL:0000810,8.76e-07,6;CL:0000895,8.76e-07,6;CL:0000808,8.76e-07,6;CL:0000894,8.76e-07,6;CL:0000806,8.76e-07,6;CL:0000807,8.76e-07,6;CL:0000805,8.76e-07,6;CL:0002425,8.76e-07,6;CL:0002436,8.76e-07,6;CL:0002427,8.76e-07,6;CL:0002428,8.76e-07,6;CL:0002429,8.76e-07,6;CL:0002433,8.76e-07,6;CL:0002431,8.76e-07,6;CL:0002432,8.76e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!3.67e-07!46;UBERON:0002405!7.96e-07!70;UBERON:0002193!8.27e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.65e-13,46;UBERON:0002390,4.67e-08,45;UBERON:0003061,4.67e-08,45;UBERON:0002193,6.19e-08,48;UBERON:0002405,6.19e-08,48|phase1_expression=0.480446541314382,0.348975407639361,0,0,0,0.503637815735669,0.233612640595526,3.61545305636414,2.956563165185,3.97909694747389,4.79410311031414,3.82906363177615,4.62241970814255,3.84649770643589,1.99865857089398,4.04950534779652,1.39912375625629,11.6721001182548,15.9052742982657,9.33657233955666,1.02051948181284,2.28369187762036,2.87319768052829,0.95995453676044,0.68822784320151,0.57423196411502,0,0.430942465371778,0.190023419456374,0.252030129759931,1.33038306393183,7.62036808151557,1.84519436275371,0,0.577703239502549,0.997407872150954,0.408338712524738,0.837063261473815,0,0,0.588231488031014,0,0,0.377690453926732,0.405507724878058,1.28482726513177,0,0.218025156380447,0.219686182734472,0.58328969722285,0.139986421625363,1.43752564364972,7.21465206048266,4.35217285206807,6.38578218370682,1.02903774414379,0.286533439938757,0.515672092277442,1.01158230429799,0.528990979272033,0,0.338844532069132,0,0,0.988866362566974,0,0,0.384218305321555,0.829516898467821,1.21505344498522,1.05162480675691,1.14260393761521,1.10434270475807,0.61245399607477,0.383381884072945,0,1.10115880999389,0.893811366596314,0.768032666281217,0.923204014111357,0.823388792421687,0.52091337055676,0.558365998002762,0.56276261003168,0.30559649555362,2.94628585473668,2.13557521198654,0.931997229126503,2.04460721999597,0.831287161174641,0.579728977403356,0.860423876981386,2.03991400112325,0,0,0,0.561777680527007,1.02258193546835,1.81850203222008,0.70667914902068,0.422530259330042,0,0,0,0.432982082022428,1.01343946190039,2.02209778005913,0.45673551887624,3.6251303710604,0.742210695324124,0.693941307064543,1.52232739156071,0.922461989024234,0.753613202763113,0.705532242814229,0.376999773989026,0.247194967734374,1.01219549843938,0,0.485300549842228,0.662524555381181,0.484875253135222,0,0.292780797011547,0.41889341362691,0.255457055208591,5.15205035375457,4.19931911695385,4.19331749341113,1.04853447583376,0.457500602818626,0.502617408451458,0.869121600961382,1.02286182932132,1.24672826735736,0.324482526135515,0.81471491080253,0.622034853050465,0.505445516867349,0,1.30120442962704,0.689706313300419,1.44049703844279,1.05493372485001,0.816437989815934,0.640568601424249,0.562210347358373,0,0.862271971731369,0.756424320671277,0.703804496655795,0.43839146485515,1.11218899690239,1.39300866608867,0.205782136407943,0.59710280045548,1.40442637462647,2.05878325691772,4.54661599032948,0.828503090142008,1.40715635988658,0.900310307305074,1.18372367792605,0.787056926989615,0.462801338662135,0.465067889500816,1.07309360559848,0.467061369468678,0.16455984991348,0.492502392237286,0.162137619091711,0.292399974850665,0,0.268412837520744,1.26173969138476,1.23485534855141,0,0,0.213288250535234,0,0.77320476793256,0.80673409849337,0.22237804384487,0.570676878337677,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0,0.379335801906163,0.571242563048644,0,0.610953983535943,0.77580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| ||
|EntrezGene=69740 | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|UniProt=Q6PAC5,Q8BG20 | |||
|association_with_transcript=25bp_to_ENSMUST00000043342,NM_027193,uc008rbr.1,uc008rbs.1_5end | |||
|description=CAGE_peak_2_at_Dph5_5end | |||
|id=chr3:115591126..115591151,+ | |||
|ontology_enrichment_celltype=CL:0000988!9.69e-12!32;CL:0002032!9.69e-12!32;CL:0000037!9.69e-12!32;CL:0000566!9.69e-12!32;CL:0000837!9.69e-12!32;CL:0002031!2.01e-09!25;CL:0000034!8.97e-09!97;CL:0000838!2.22e-08!12;CL:0000084!1.03e-07!11;CL:0000827!1.03e-07!11;CL:0000542!3.25e-07!13;CL:0000051!3.25e-07!13;CL:0002320!3.67e-07!46;CL:0000134!3.67e-07!46;CL:0000791!9.19e-07!9;CL:0000789!9.19e-07!9;CL:0002420!9.19e-07!9;CL:0002419!9.19e-07!9;CL:0000790!9.19e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.92e-19,32;CL:0002032,3.92e-19,32;CL:0000037,3.92e-19,32;CL:0000837,3.92e-19,32;CL:0002031,4.04e-15,25;CL:0002320,5.65e-13,46;CL:0000134,5.65e-13,46;CL:0000838,5.51e-12,12;CL:0000219,3.01e-11,54;CL:0000034,4.29e-11,97;CL:0000084,5.75e-11,11;CL:0000827,5.75e-11,11;CL:0000542,1.03e-10,13;CL:0000051,1.03e-10,13;CL:0000049,1.02e-09,19;CL:0000791,1.60e-09,9;CL:0000789,1.60e-09,9;CL:0002420,1.60e-09,9;CL:0002419,1.60e-09,9;CL:0000790,1.60e-09,9;CL:0000738,1.24e-08,17;CL:0002087,1.24e-08,17;CL:0000624,1.61e-08,8;CL:0000723,9.30e-08,91;CL:0000048,9.30e-08,91;CL:0000763,3.24e-07,16;CL:0000050,5.49e-07,9;CL:0000893,8.76e-07,6;CL:0002489,8.76e-07,6;CL:0000898,8.76e-07,6;CL:0000809,8.76e-07,6;CL:0000810,8.76e-07,6;CL:0000895,8.76e-07,6;CL:0000808,8.76e-07,6;CL:0000894,8.76e-07,6;CL:0000806,8.76e-07,6;CL:0000807,8.76e-07,6;CL:0000805,8.76e-07,6;CL:0002425,8.76e-07,6;CL:0002436,8.76e-07,6;CL:0002427,8.76e-07,6;CL:0002428,8.76e-07,6;CL:0002429,8.76e-07,6;CL:0002433,8.76e-07,6;CL:0002431,8.76e-07,6;CL:0002432,8.76e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.67e-07!46;UBERON:0002405!7.96e-07!70;UBERON:0002193!8.27e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.65e-13,46;UBERON:0002390,4.67e-08,45;UBERON:0003061,4.67e-08,45;UBERON:0002193,6.19e-08,48;UBERON:0002405,6.19e-08,48 | |||
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| |||
|short_description=p2@Dph5 | |||
}} | |||
Revision as of 01:18, 14 September 2013
| Short description: | p2@Dph5 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Dph5_5end |
| Coexpression cluster: | MCL_coexpression_mm9:18 |
| Association with transcript: | 25bp_to_ENSMUST00000043342, NM_027193, uc008rbr.1, uc008rbs.1_5end |
| EntrezGene: | Dph5 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| connective tissue | 5.65e-13 | 46 |
| hematopoietic system | 4.67e-08 | 45 |
| blood island | 4.67e-08 | 45 |
| hemolymphoid system | 6.19e-08 | 48 |
| immune system | 6.19e-08 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
