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FFCP PHASE1:Mm9::chr3:123393724..123393765,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=83398|HGNC=|MCL_coexpression_id=281|UniProt=E9PZJ4|association_with_transcript=0bp_to_ENSMUST00000154668_5end|description=CAGE_peak_2_at_Ndst3_5end|id=chr3:123393724..123393765,-|ontology_enrichment_celltype=CL:0000540!5.73e-18!33;CL:0000047!5.73e-18!33;CL:0000031!5.73e-18!33;CL:0000404!5.73e-18!33;CL:0000221!2.04e-14!44;CL:0000133!2.04e-14!44;CL:0002319!2.38e-14!43;CL:0000393!6.48e-14!39;CL:0000211!6.48e-14!39;CL:0000117!1.73e-12!23;CL:0000337!1.73e-12!23;CL:0000055!6.92e-11!50|ontology_enrichment_celltype_v019_2=CL:0000540,6.36e-23,33;CL:0000047,6.36e-23,33;CL:0000031,6.36e-23,33;CL:0000404,6.36e-23,33;CL:0000221,1.64e-17,44;CL:0000133,1.64e-17,44;CL:0002319,2.03e-17,43;CL:0000393,3.02e-17,39;CL:0000211,3.02e-17,39;CL:0000117,8.81e-16,23;CL:0000337,8.81e-16,23;CL:0000107,3.59e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!7.94e-25!75;UBERON:0001016!7.94e-25!75;UBERON:0004121!7.18e-24!102;UBERON:0000924!7.18e-24!102;UBERON:0006601!7.18e-24!102;UBERON:0001017!2.38e-23!73;UBERON:0005743!2.38e-23!73;UBERON:0002346!3.80e-18!71;UBERON:0003075!3.80e-18!71;UBERON:0007284!3.80e-18!71;UBERON:0000033!2.82e-16!63;UBERON:0001049!4.97e-16!52;UBERON:0005068!4.97e-16!52;UBERON:0006241!4.97e-16!52;UBERON:0007135!4.97e-16!52;UBERON:0002020!1.28e-15!34;UBERON:0003056!1.97e-15!49;UBERON:0000955!8.98e-15!50;UBERON:0006238!8.98e-15!50;UBERON:0002616!2.36e-14!49;UBERON:0002791!5.17e-13!29;UBERON:0003528!5.17e-13!29;UBERON:0001893!5.17e-13!29;UBERON:0003080!8.55e-13!40;UBERON:0002780!2.94e-12!39;UBERON:0001890!2.94e-12!39;UBERON:0006240!2.94e-12!39;UBERON:0000956!1.14e-09!21;UBERON:0001869!1.14e-09!21;UBERON:0000203!1.14e-09!21;UBERON:0000468!8.43e-09!333;UBERON:0000010!5.47e-08!11;UBERON:0002619!1.78e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.23e-29,95;UBERON:0000924,2.23e-29,95;UBERON:0006601,2.23e-29,95;UBERON:0001016,4.22e-29,75;UBERON:0001017,3.07e-27,73;UBERON:0002346,1.08e-22,64;UBERON:0003075,1.08e-22,64;UBERON:0007284,1.08e-22,64;UBERON:0010371,3.35e-22,73;UBERON:0000073,2.59e-19,54;UBERON:0002020,1.67e-18,34;UBERON:0001049,3.76e-18,52;UBERON:0005068,3.76e-18,52;UBERON:0006241,3.76e-18,52;UBERON:0007135,3.76e-18,52;UBERON:0003056,1.56e-15,49;UBERON:0003528,3.75e-15,29;UBERON:0002791,3.75e-15,29;UBERON:0001893,3.75e-15,29;UBERON:0000955,4.14e-15,47;UBERON:0006238,4.14e-15,47;UBERON:0002616,1.37e-14,46;UBERON:0003080,2.19e-13,40;UBERON:0002780,9.95e-13,39;UBERON:0001890,9.95e-13,39;UBERON:0006240,9.95e-13,39;UBERON:0010314,4.69e-11,92;UBERON:0000956,7.78e-11,21;UBERON:0001869,7.78e-11,21;UBERON:0000203,7.78e-11,21;UBERON:0000010,6.27e-10,11;UBERON:0002410,3.59e-08,9;UBERON:0002619,4.58e-08,17;UBERON:0002021,8.28e-07,10;UBERON:0000411,8.28e-07,10;UBERON:0001950,8.28e-07,10|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.183546752161682,0,0,0.659058548203415,0.388859798148567,0.139986421625363,0,0,0,0,0.257259436035947,0,0,6.06949382578793,3.1739458756322,6.97214543856797,0,0,0,0,0,0.898800331555214,0,4.97710139080693,4.05017814995072,2.52389953621658,1.99955689082663,2.87129103237098,5.02212276781312,3.45043695665651,3.67687514644008,4.40463523997555,2.29837208553338,1.53606533256243,5.01167893374737,2.74462930807229,2.6045668527838,1.95428099300967,3.37657566019008,2.44477196442896,3.83017161115768,3.84403538157578,8.01517617048792,5.52801211332244,7.25486977025141,0,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0,1.03575153458869,0.29688427812965,0.346970653532272,0.304465478312141,0.230615497256059,0.301445281105245,0.117588707135705,0,0,0.433798070759735,0,0,0,0,0,24.0080253549469,26.1808383516819,0.255457055208591,0,0,0,3.89455662452539,1.83000241127451,3.39266750704734,7.12679712788333,6.90431734791892,2.28566849015516,3.40706652442291,1.42575109390443,0.124406970610093,0,0.631325567659422,0.650602214813519,1.83921683546778,2.16074555766419,2.26057226753573,2.4493139694478,3.20284300712124,2.43624483855295,3.10444044886819,0,0.567318240503458,0.527853372491847,0,0,1.0447564995665,1.23469281844766,1.19420560091096,0,0,0,0.207125772535502,0.234526059981096,0.720248245844059,0.473489471170421,0.590292695242212,0.617068451549513,0,0.536546802799238,0.467061369468678,0.987359099480883,0.32833492815819,0.405344047729279,0.292399974850665,0.219550115291051,0,5.88811855979556,1.44066457330998,0,0,0.426576501070468,2.78684006232526,1.28867461322093,1.81515172161008,1.11189021922435,1.14135375667535,0,0.823494773620054,1.00534083520108,0.795825888164603,0.974820435595601,0,0.648414149624083,0.597423819763102,0,0.685491075658373,3.38123207019241,0.814605311381257,1.16371492300575,1.19230893813542,1.45444035385792,0.885660887877613,0.156998727841375,0.616985819609003,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0.372140947668503,0.312037673114561,0.505157755894224,0,0,0,0.568474235311454,1.30371981153621,0.3394901715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|EntrezGene=83398
|HGNC=
|MCL_coexpression_id=281
|UniProt=E9PZJ4
|association_with_transcript=0bp_to_ENSMUST00000154668_5end
|description=CAGE_peak_2_at_Ndst3_5end
|id=chr3:123393724..123393765,-
|ontology_enrichment_celltype=CL:0000540!5.73e-18!33;CL:0000047!5.73e-18!33;CL:0000031!5.73e-18!33;CL:0000404!5.73e-18!33;CL:0000221!2.04e-14!44;CL:0000133!2.04e-14!44;CL:0002319!2.38e-14!43;CL:0000393!6.48e-14!39;CL:0000211!6.48e-14!39;CL:0000117!1.73e-12!23;CL:0000337!1.73e-12!23;CL:0000055!6.92e-11!50
|ontology_enrichment_celltype_v019_2=CL:0000540,6.36e-23,33;CL:0000047,6.36e-23,33;CL:0000031,6.36e-23,33;CL:0000404,6.36e-23,33;CL:0000221,1.64e-17,44;CL:0000133,1.64e-17,44;CL:0002319,2.03e-17,43;CL:0000393,3.02e-17,39;CL:0000211,3.02e-17,39;CL:0000117,8.81e-16,23;CL:0000337,8.81e-16,23;CL:0000107,3.59e-08,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!7.94e-25!75;UBERON:0001016!7.94e-25!75;UBERON:0004121!7.18e-24!102;UBERON:0000924!7.18e-24!102;UBERON:0006601!7.18e-24!102;UBERON:0001017!2.38e-23!73;UBERON:0005743!2.38e-23!73;UBERON:0002346!3.80e-18!71;UBERON:0003075!3.80e-18!71;UBERON:0007284!3.80e-18!71;UBERON:0000033!2.82e-16!63;UBERON:0001049!4.97e-16!52;UBERON:0005068!4.97e-16!52;UBERON:0006241!4.97e-16!52;UBERON:0007135!4.97e-16!52;UBERON:0002020!1.28e-15!34;UBERON:0003056!1.97e-15!49;UBERON:0000955!8.98e-15!50;UBERON:0006238!8.98e-15!50;UBERON:0002616!2.36e-14!49;UBERON:0002791!5.17e-13!29;UBERON:0003528!5.17e-13!29;UBERON:0001893!5.17e-13!29;UBERON:0003080!8.55e-13!40;UBERON:0002780!2.94e-12!39;UBERON:0001890!2.94e-12!39;UBERON:0006240!2.94e-12!39;UBERON:0000956!1.14e-09!21;UBERON:0001869!1.14e-09!21;UBERON:0000203!1.14e-09!21;UBERON:0000468!8.43e-09!333;UBERON:0000010!5.47e-08!11;UBERON:0002619!1.78e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.23e-29,95;UBERON:0000924,2.23e-29,95;UBERON:0006601,2.23e-29,95;UBERON:0001016,4.22e-29,75;UBERON:0001017,3.07e-27,73;UBERON:0002346,1.08e-22,64;UBERON:0003075,1.08e-22,64;UBERON:0007284,1.08e-22,64;UBERON:0010371,3.35e-22,73;UBERON:0000073,2.59e-19,54;UBERON:0002020,1.67e-18,34;UBERON:0001049,3.76e-18,52;UBERON:0005068,3.76e-18,52;UBERON:0006241,3.76e-18,52;UBERON:0007135,3.76e-18,52;UBERON:0003056,1.56e-15,49;UBERON:0003528,3.75e-15,29;UBERON:0002791,3.75e-15,29;UBERON:0001893,3.75e-15,29;UBERON:0000955,4.14e-15,47;UBERON:0006238,4.14e-15,47;UBERON:0002616,1.37e-14,46;UBERON:0003080,2.19e-13,40;UBERON:0002780,9.95e-13,39;UBERON:0001890,9.95e-13,39;UBERON:0006240,9.95e-13,39;UBERON:0010314,4.69e-11,92;UBERON:0000956,7.78e-11,21;UBERON:0001869,7.78e-11,21;UBERON:0000203,7.78e-11,21;UBERON:0000010,6.27e-10,11;UBERON:0002410,3.59e-08,9;UBERON:0002619,4.58e-08,17;UBERON:0002021,8.28e-07,10;UBERON:0000411,8.28e-07,10;UBERON:0001950,8.28e-07,10
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.183546752161682,0,0,0.659058548203415,0.388859798148567,0.139986421625363,0,0,0,0,0.257259436035947,0,0,6.06949382578793,3.1739458756322,6.97214543856797,0,0,0,0,0,0.898800331555214,0,4.97710139080693,4.05017814995072,2.52389953621658,1.99955689082663,2.87129103237098,5.02212276781312,3.45043695665651,3.67687514644008,4.40463523997555,2.29837208553338,1.53606533256243,5.01167893374737,2.74462930807229,2.6045668527838,1.95428099300967,3.37657566019008,2.44477196442896,3.83017161115768,3.84403538157578,8.01517617048792,5.52801211332244,7.25486977025141,0,0,0,0,0,0,0,0,0,0,1.12674735821344,0,0,0,0,0,0,0,1.03575153458869,0.29688427812965,0.346970653532272,0.304465478312141,0.230615497256059,0.301445281105245,0.117588707135705,0,0,0.433798070759735,0,0,0,0,0,24.0080253549469,26.1808383516819,0.255457055208591,0,0,0,3.89455662452539,1.83000241127451,3.39266750704734,7.12679712788333,6.90431734791892,2.28566849015516,3.40706652442291,1.42575109390443,0.124406970610093,0,0.631325567659422,0.650602214813519,1.83921683546778,2.16074555766419,2.26057226753573,2.4493139694478,3.20284300712124,2.43624483855295,3.10444044886819,0,0.567318240503458,0.527853372491847,0,0,1.0447564995665,1.23469281844766,1.19420560091096,0,0,0,0.207125772535502,0.234526059981096,0.720248245844059,0.473489471170421,0.590292695242212,0.617068451549513,0,0.536546802799238,0.467061369468678,0.987359099480883,0.32833492815819,0.405344047729279,0.292399974850665,0.219550115291051,0,5.88811855979556,1.44066457330998,0,0,0.426576501070468,2.78684006232526,1.28867461322093,1.81515172161008,1.11189021922435,1.14135375667535,0,0.823494773620054,1.00534083520108,0.795825888164603,0.974820435595601,0,0.648414149624083,0.597423819763102,0,0.685491075658373,3.38123207019241,0.814605311381257,1.16371492300575,1.19230893813542,1.45444035385792,0.885660887877613,0.156998727841375,0.616985819609003,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0.372140947668503,0.312037673114561,0.505157755894224,0,0,0,0.568474235311454,1.30371981153621,0.339490171550376,0.234690248288502,0,0.952174563544055,0.390267295715598,0.945810864637146,0.221464689648775,0.318909537314974,0.327726629431476,0.172684981865896,0,0,0,0,0.275936746304732,1.44495530989013,2.93029216480508,0.491804836130026,0,4.10160685241134,2.73307121007647,6.24727853425117,2.38968797952552,6.23836287430704,5.66153061577665,5.26253912177363,4.09158201075837,6.32460444714438,2.57057053137446,0.425820255624806,1.95872164033981,4.39794790254655,1.97964147567043,0,0.242780636154981,0.604647113929502,0.377210159511796,0,1.53717573971964,0.516856586336442,0.727067458955011,0.356497378384721,0,0,0,4.08527526904546,0.540183282093931,0.129358683782755,0.214337035031592,0.354680467284547,0.713475270408282,1.48094118541909,0,0,0,0,0.65954501176592,4.52100394748536,2.53314284698255,1.55184047204077,0.328281799490123,1.1659233465194,1.8542530201051,0,0.206386867963223,0.185194527369712,0,0,0,0.169978429993855,0,0,0,1.10717597753397,2.64315307264903,2.59212817972323,2.29997125615916,1.52853794622324,1.21377911746339,1.1571483801547,0.785267825952089,0.388844919875379,0,0.56369293868419,0.299033092087958,0.330916980914195,0.194451188344048,0.258319646955462,0,0.469428954583016,0.13020438484395,0.314578033277133,0.241584120826006,0.288030006257865,0,0,0,0.129920822977795,0,0,0,0.295379054349154,0.201932899896295,0,0,0,0,0,0,0,0,0,0.19318959403219,0.375364950902364,0.549454872801795,0.643105137237198,0,4.51801474093653,4.14292712856459,2.86447756719698,2.92150409984269,2.74033007908257,1.5107877947794,1.35004500046361,2.2516060161211,4.53142408984205,5.69536342927002,0.415149390336707,3.99024873401031,1.19513524027894,1.70174701947806,0.628839487883947,0.919217542250071,1.77797382241292,2.06035057238894,0.962757628775446,1.51618327058278,0.50695859978048,2.26351609663291,1.49826411951812,1.6646539625266,1.89537047553524,3.33405583898152,1.62238056322798,2.12200142510076,1.23625770240992,1.91358596174717,3.08582327146874,1.95223386775271,1.66905332963125,1.88950341622027,1.78807822789128,1.52306294205018,2.74391959309159,1.8414879800649,1.49384525230448,2.80571135828869,1.66089025373844,2.06859412988683,0.409231043169689,2.32405261778949,2.50778594275484,2.24829520144151,1.87145286756327,2.14871054048298,0.57386499620653,0.441182838239031,0.231867835620421
|short_description=p2@Ndst3
}}

Revision as of 01:26, 14 September 2013

Short description:p2@Ndst3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ndst3_5end
Coexpression cluster:MCL_coexpression_mm9:281
Association with transcript: 0bp_to_ENSMUST00000154668_5end
EntrezGene:Ndst3
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Ndst3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C36.07
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.98
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.05
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.02
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.45
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.01
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.02
Mouse Schwann, donor1.CNhs12507.11728-123D95.53
Mouse Schwann, donor2.CNhs12573.11746-123F97.25
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B224.01
cerebellum, neonate N30.CNhs11135.1395-42I226.18
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.89
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F13.39
cortex, adult.CNhs10473.12-14D57.13
cortex, neonate N30.CNhs11107.1392-42F26.90
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B23.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C62.45
eyeball, neonate N01.CNhs11140.1532-43E73.20
eyeball, neonate N02.CNhs11205.1551-44G82.44
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E85.89
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.19
kidney, neonate N10.CNhs11206.758-6D51.45
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A32.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.25
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.24
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.66
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.32
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I44.40
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G84.09
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G44.52
skin, neonate N03.CNhs11215.662-22H32.53
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C91.85
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G82.64
stomach, embryo E16.CNhs11022.459-17D42.59
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A91.16
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure2.23e-2995
ectoderm2.23e-2995
presumptive ectoderm2.23e-2995
nervous system4.22e-2975
central nervous system3.07e-2773
neurectoderm1.08e-2264
neural plate1.08e-2264
presumptive neural plate1.08e-2264
ecto-epithelium3.35e-2273
regional part of nervous system2.59e-1954
gray matter1.67e-1834
neural tube3.76e-1852
neural rod3.76e-1852
future spinal cord3.76e-1852
neural keel3.76e-1852
pre-chordal neural plate1.56e-1549
brain grey matter3.75e-1529
regional part of telencephalon3.75e-1529
telencephalon3.75e-1529
brain4.14e-1547
future brain4.14e-1547
regional part of brain1.37e-1446
anterior neural tube2.19e-1340
regional part of forebrain9.95e-1339
forebrain9.95e-1339
future forebrain9.95e-1339
structure with developmental contribution from neural crest4.69e-1192
cerebral cortex7.78e-1121
cerebral hemisphere7.78e-1121
pallium7.78e-1121
peripheral nervous system6.27e-1011
autonomic nervous system3.59e-089
regional part of cerebral cortex4.58e-0817
occipital lobe8.28e-0710
visual cortex8.28e-0710
neocortex8.28e-0710







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