FFCP PHASE1:Hg19::chr7:77199889..77199909,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5782|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9645|TSSclassifier=N|UniProt=|association_with_transcript=-485bp_to_uc010ldq.1,uc010ldr.1_5end|coexpression_cluster_id=C0|description=CAGE_peak_17_at_PTPN12_5end|id=chr7:77199889..77199909,+|ontology_enrichment_celltype=CL:0002009!1.35e-49!65;CL:0002057!9.02e-49!42;CL:0002194!1.81e-46!63;CL:0000576!1.81e-46!63;CL:0000040!1.81e-46!63;CL:0000559!1.81e-46!63;CL:0000766!2.10e-46!76;CL:0000763!7.65e-45!112;CL:0000049!7.65e-45!112;CL:0000860!1.16e-44!45;CL:0000557!4.12e-44!71;CL:0000839!2.32e-40!70;CL:0000738!2.00e-29!140;CL:0000037!1.44e-27!172;CL:0000566!1.44e-27!172;CL:0002032!2.26e-27!165;CL:0000837!2.26e-27!165;CL:0000988!5.78e-25!182;CL:0002087!4.03e-23!119;CL:0002031!6.06e-22!124;CL:0000134!8.75e-21!358;CL:0002320!6.89e-20!365;CL:0000219!1.07e-18!390;CL:0000034!1.04e-16!444;CL:0000723!1.74e-15!436;CL:0000048!1.76e-15!430;CL:0000990!1.36e-12!8;CL:0000451!5.87e-10!10;CL:0000453!8.39e-10!5;CL:0000063!6.88e-09!578;CL:0002371!5.89e-08!591;CL:0000144!6.81e-08!625;CL:0000840!6.95e-08!5;CL:0001029!6.95e-08!5|ontology_enrichment_celltype_v019=CL:0000860;7.97e-69;33!CL:0002057;7.97e-69;33!CL:0000473;3.88e-58;39!CL:0000234;3.88e-58;39!CL:0000576;4.19e-37;48!CL:0000990;4.95e-28;8!CL:0000766;1.55e-27;69!CL:0000451;1.05e-22;10!CL:0000453;5.31e-21;5!CL:0000840;7.08e-17;5!CL:0000763;5.66e-13;100!CL:0000738;1.53e-11;136!CL:0001014;1.37e-09;2!CL:0001016;1.37e-09;2!CL:0000771;2.09e-09;2!CL:0002087;2.24e-09;104!CL:0000094;2.96e-08;8|ontology_enrichment_celltype_v019_2=CL:0002009,1.15e-75,61;CL:0000473,1.27e-72,48;CL:0000234,1.27e-72,48;CL:0000766,1.23e-70,72;CL:0002194,4.21e-69,59;CL:0000576,4.21e-69,59;CL:0000040,4.21e-69,59;CL:0000559,4.21e-69,59;CL:0000557,2.83e-68,67;CL:0000860,8.05e-68,42;CL:0002057,8.05e-68,42;CL:0000839,4.55e-61,66;CL:0000763,2.62e-59,108;CL:0000049,2.62e-59,108;CL:0000738,2.28e-45,136;CL:0002032,5.50e-37,161;CL:0000837,5.50e-37,161;CL:0000037,4.40e-35,168;CL:0002031,8.13e-35,120;CL:0000988,7.44e-33,177;CL:0002087,5.59e-32,115;CL:0000990,4.45e-28,8;CL:0000451,9.64e-23,10;CL:0000453,6.84e-21,5;CL:0000840,5.69e-17,5;CL:0001029,5.69e-17,5;CL:0000134,9.40e-14,354;CL:0002320,2.63e-13,361;CL:0000219,9.82e-12,386;CL:0000034,1.01e-10,441;CL:0000048,8.24e-10,427;CL:0000723,1.52e-09,433;CL:0001014,1.53e-09,2;CL:0001016,1.53e-09,2;CL:0000771,2.23e-09,2;CL:0000094,3.30e-08,8|ontology_enrichment_development_v019=CL:0002057;2.07e-51;42!CL:0000049;1.02e-13;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.94e-39!80;UBERON:0001474!1.60e-38!86;UBERON:0004765!1.93e-30!101;UBERON:0001434!1.93e-30!101;UBERON:0002390!3.42e-30!102;UBERON:0003061!3.42e-30!102;UBERON:0002193!4.25e-26!112;UBERON:0002405!5.22e-26!115;UBERON:0002384!1.14e-18!375;UBERON:0002204!1.22e-15!167;UBERON:0003081!7.84e-12!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.39e-59,76;UBERON:0001474,1.79e-54,82;UBERON:0004765,5.69e-49,90;UBERON:0002405,3.78e-47,93;UBERON:0002390,2.34e-44,98;UBERON:0003061,2.34e-44,98;UBERON:0001434,2.56e-43,100;UBERON:0002193,1.52e-39,108;UBERON:0002204,8.31e-23,167;UBERON:0003081,1.17e-18,203;UBERON:0002384,1.07e-12,371;UBERON:0000926,6.21e-10,315;UBERON:0004120,6.21e-10,315;UBERON:0006603,6.21e-10,315|phase1_expression=0.181678379270557,0.428201047781966,0.422863212287913,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0.393364276848904,1.53531759238885,1.08371286321253,0,0,0,0,0,0,3.87796785972314,0.601633342410425,1.95309783644267,0,0,0,0.581592955118259,0.755751887377619,0.242584061187816,3.71886459049095,2.87817521615278,4.02618282163635,4.02769349251011,4.61089271752381,5.91205574721463,6.20542225325913,4.51839278508678,2.70852973188684,1.88242339542605,2.18324920046277,2.9214052977861,3.67300670845083,4.8139354061414,6.39337125799041,0.659702600373432,2.19410023383795,0.426224750532694,5.80418477257168,10.7803192691317,6.22822248995575,4.77372463987812,2.08593167368081,4.99534342821768,4.84319602106695,13.2579948955523,8.86094684834476,0,0,0,0.336985893439485,0.150176892841506,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9472843619281,2.61194605948901,1.72845348674525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,7.75560528296651,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717558542755448,0.213557388818567,0,0.600182192168805,0,0,0,0.675105328965065,0,0.757301322732344,0.184099797284599,0,1.77504796258307,0.503760491138201,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,2.80805118167085,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5782 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9645 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-485bp_to_uc010ldq.1,uc010ldr.1_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_17_at_PTPN12_5end | |||
|id=chr7:77199889..77199909,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.35e-49!65;CL:0002057!9.02e-49!42;CL:0002194!1.81e-46!63;CL:0000576!1.81e-46!63;CL:0000040!1.81e-46!63;CL:0000559!1.81e-46!63;CL:0000766!2.10e-46!76;CL:0000763!7.65e-45!112;CL:0000049!7.65e-45!112;CL:0000860!1.16e-44!45;CL:0000557!4.12e-44!71;CL:0000839!2.32e-40!70;CL:0000738!2.00e-29!140;CL:0000037!1.44e-27!172;CL:0000566!1.44e-27!172;CL:0002032!2.26e-27!165;CL:0000837!2.26e-27!165;CL:0000988!5.78e-25!182;CL:0002087!4.03e-23!119;CL:0002031!6.06e-22!124;CL:0000134!8.75e-21!358;CL:0002320!6.89e-20!365;CL:0000219!1.07e-18!390;CL:0000034!1.04e-16!444;CL:0000723!1.74e-15!436;CL:0000048!1.76e-15!430;CL:0000990!1.36e-12!8;CL:0000451!5.87e-10!10;CL:0000453!8.39e-10!5;CL:0000063!6.88e-09!578;CL:0002371!5.89e-08!591;CL:0000144!6.81e-08!625;CL:0000840!6.95e-08!5;CL:0001029!6.95e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.97e-69;33!CL:0002057;7.97e-69;33!CL:0000473;3.88e-58;39!CL:0000234;3.88e-58;39!CL:0000576;4.19e-37;48!CL:0000990;4.95e-28;8!CL:0000766;1.55e-27;69!CL:0000451;1.05e-22;10!CL:0000453;5.31e-21;5!CL:0000840;7.08e-17;5!CL:0000763;5.66e-13;100!CL:0000738;1.53e-11;136!CL:0001014;1.37e-09;2!CL:0001016;1.37e-09;2!CL:0000771;2.09e-09;2!CL:0002087;2.24e-09;104!CL:0000094;2.96e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.15e-75,61;CL:0000473,1.27e-72,48;CL:0000234,1.27e-72,48;CL:0000766,1.23e-70,72;CL:0002194,4.21e-69,59;CL:0000576,4.21e-69,59;CL:0000040,4.21e-69,59;CL:0000559,4.21e-69,59;CL:0000557,2.83e-68,67;CL:0000860,8.05e-68,42;CL:0002057,8.05e-68,42;CL:0000839,4.55e-61,66;CL:0000763,2.62e-59,108;CL:0000049,2.62e-59,108;CL:0000738,2.28e-45,136;CL:0002032,5.50e-37,161;CL:0000837,5.50e-37,161;CL:0000037,4.40e-35,168;CL:0002031,8.13e-35,120;CL:0000988,7.44e-33,177;CL:0002087,5.59e-32,115;CL:0000990,4.45e-28,8;CL:0000451,9.64e-23,10;CL:0000453,6.84e-21,5;CL:0000840,5.69e-17,5;CL:0001029,5.69e-17,5;CL:0000134,9.40e-14,354;CL:0002320,2.63e-13,361;CL:0000219,9.82e-12,386;CL:0000034,1.01e-10,441;CL:0000048,8.24e-10,427;CL:0000723,1.52e-09,433;CL:0001014,1.53e-09,2;CL:0001016,1.53e-09,2;CL:0000771,2.23e-09,2;CL:0000094,3.30e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.07e-51;42!CL:0000049;1.02e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.94e-39!80;UBERON:0001474!1.60e-38!86;UBERON:0004765!1.93e-30!101;UBERON:0001434!1.93e-30!101;UBERON:0002390!3.42e-30!102;UBERON:0003061!3.42e-30!102;UBERON:0002193!4.25e-26!112;UBERON:0002405!5.22e-26!115;UBERON:0002384!1.14e-18!375;UBERON:0002204!1.22e-15!167;UBERON:0003081!7.84e-12!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.39e-59,76;UBERON:0001474,1.79e-54,82;UBERON:0004765,5.69e-49,90;UBERON:0002405,3.78e-47,93;UBERON:0002390,2.34e-44,98;UBERON:0003061,2.34e-44,98;UBERON:0001434,2.56e-43,100;UBERON:0002193,1.52e-39,108;UBERON:0002204,8.31e-23,167;UBERON:0003081,1.17e-18,203;UBERON:0002384,1.07e-12,371;UBERON:0000926,6.21e-10,315;UBERON:0004120,6.21e-10,315;UBERON:0006603,6.21e-10,315 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.422863212287913,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0.393364276848904,1.53531759238885,1.08371286321253,0,0,0,0,0,0,3.87796785972314,0.601633342410425,1.95309783644267,0,0,0,0.581592955118259,0.755751887377619,0.242584061187816,3.71886459049095,2.87817521615278,4.02618282163635,4.02769349251011,4.61089271752381,5.91205574721463,6.20542225325913,4.51839278508678,2.70852973188684,1.88242339542605,2.18324920046277,2.9214052977861,3.67300670845083,4.8139354061414,6.39337125799041,0.659702600373432,2.19410023383795,0.426224750532694,5.80418477257168,10.7803192691317,6.22822248995575,4.77372463987812,2.08593167368081,4.99534342821768,4.84319602106695,13.2579948955523,8.86094684834476,0,0,0,0.336985893439485,0.150176892841506,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9472843619281,2.61194605948901,1.72845348674525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,7.75560528296651,0,0,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717558542755448,0.213557388818567,0,0.600182192168805,0,0,0,0.675105328965065,0,0.757301322732344,0.184099797284599,0,1.77504796258307,0.503760491138201,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,2.80805118167085,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0,0.306923946576125,0.280660094433074,0,0,0.160853921143607,0,0,0.177561725313127,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0.464845549297286,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0,0.425846237690326,0,0.307240764308458,0.223676107892416,0,0.19538809540204,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.90975216557434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0.274792780205587,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0.480952921509202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,6.07429507189051,2.32140586367385,0,0,0,0,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,0,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0,0,0.796191777397232,0,0,0,1.26184898228651,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,4.28692679446655,4.38453973034098,1.4720885483026,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p17@PTPN12 | |||
}} |
Revision as of 02:04, 14 September 2013
Short description: | p17@PTPN12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_PTPN12_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -485bp_to_uc010ldq.1, uc010ldr.1_5end |
EntrezGene: | PTPN12 |
HGNC: | 9645 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.39e-59 | 76 |
bone element | 1.79e-54 | 82 |
skeletal element | 5.69e-49 | 90 |
immune system | 3.78e-47 | 93 |
hematopoietic system | 2.34e-44 | 98 |
blood island | 2.34e-44 | 98 |
skeletal system | 2.56e-43 | 100 |
hemolymphoid system | 1.52e-39 | 108 |
musculoskeletal system | 8.31e-23 | 167 |
lateral plate mesoderm | 1.17e-18 | 203 |
connective tissue | 1.07e-12 | 371 |
mesoderm | 6.21e-10 | 315 |
mesoderm-derived structure | 6.21e-10 | 315 |
presumptive mesoderm | 6.21e-10 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.