FFCP PHASE1:Mm9::chr4:151401911..151401934,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=733|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:151401911..151401934,+|id=chr4:151401911..151401934,+|ontology_enrichment_celltype=CL:0000117!3.38e-10!23;CL:0000337!3.38e-10!23;CL:0000540!3.89e-08!33;CL:0000047!3.89e-08!33;CL:0000031!3.89e-08!33;CL:0000404!3.89e-08!33;CL:0000221!8.15e-07!44;CL:0000133!8.15e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,8.53e-13,23;CL:0000337,8.53e-13,23;CL:0000540,1.91e-09,33;CL:0000047,1.91e-09,33;CL:0000031,1.91e-09,33;CL:0000404,1.91e-09,33;CL:0000221,5.67e-07,44;CL:0000133,5.67e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!8.25e-22!52;UBERON:0005068!8.25e-22!52;UBERON:0006241!8.25e-22!52;UBERON:0007135!8.25e-22!52;UBERON:0001017!1.19e-21!73;UBERON:0005743!1.19e-21!73;UBERON:0000033!8.99e-21!63;UBERON:0000073!1.58e-20!75;UBERON:0001016!1.58e-20!75;UBERON:0002616!2.78e-20!49;UBERON:0000955!6.26e-20!50;UBERON:0006238!6.26e-20!50;UBERON:0002346!5.96e-19!71;UBERON:0003075!5.96e-19!71;UBERON:0007284!5.96e-19!71;UBERON:0004121!2.33e-18!102;UBERON:0000924!2.33e-18!102;UBERON:0006601!2.33e-18!102;UBERON:0003056!3.72e-17!49;UBERON:0003080!9.80e-17!40;UBERON:0002780!4.59e-16!39;UBERON:0001890!4.59e-16!39;UBERON:0006240!4.59e-16!39;UBERON:0002020!7.73e-15!34;UBERON:0002791!3.85e-12!29;UBERON:0003528!3.85e-12!29;UBERON:0001893!3.85e-12!29;UBERON:0000153!3.08e-10!94;UBERON:0007811!1.43e-09!86;UBERON:0000956!1.53e-08!21;UBERON:0001869!1.53e-08!21;UBERON:0000203!1.53e-08!21;UBERON:0002619!2.37e-08!17;UBERON:0002021!8.59e-07!10;UBERON:0000411!8.59e-07!10;UBERON:0001950!8.59e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.62e-27,54;UBERON:0001049,1.19e-25,52;UBERON:0005068,1.19e-25,52;UBERON:0006241,1.19e-25,52;UBERON:0007135,1.19e-25,52;UBERON:0001017,1.75e-25,73;UBERON:0001016,3.53e-24,75;UBERON:0002346,7.18e-24,64;UBERON:0003075,7.18e-24,64;UBERON:0007284,7.18e-24,64;UBERON:0010371,1.98e-21,73;UBERON:0002616,4.08e-21,46;UBERON:0004121,1.50e-20,95;UBERON:0000924,1.50e-20,95;UBERON:0006601,1.50e-20,95;UBERON:0000955,2.61e-20,47;UBERON:0006238,2.61e-20,47;UBERON:0003080,5.42e-20,40;UBERON:0003056,2.57e-19,49;UBERON:0002780,4.14e-19,39;UBERON:0001890,4.14e-19,39;UBERON:0006240,4.14e-19,39;UBERON:0002020,2.02e-17,34;UBERON:0003528,7.21e-14,29;UBERON:0002791,7.21e-14,29;UBERON:0001893,7.21e-14,29;UBERON:0010314,4.35e-12,92;UBERON:0000956,3.83e-09,21;UBERON:0001869,3.83e-09,21;UBERON:0000203,3.83e-09,21;UBERON:0002619,3.94e-09,17;UBERON:0002021,1.23e-08,10;UBERON:0000411,1.23e-08,10;UBERON:0001950,1.23e-08,10;UBERON:0004111,5.90e-07,122|phase1_expression=2.7225304007815,0.348975407639361,0.454999239389536,0.90739263392049,1.50268718983904,0.503637815735669,0.467225281191051,0.387369970324729,0.84473233291,0.468129052643987,0,0,0,0,0,0.404950534779652,0,0.157731082679119,0,0.42438965179803,3.91199134694921,0.0992909512008853,0,0,0.22940928106717,0,0,0.215471232685889,0,0,0.443461021310609,2.54012269383853,2.46025915033828,0,0.577703239502549,0,0.408338712524738,0,0,0,2.35292595212406,0,0,0.251793635951155,0.304130793658544,0.367093504323363,0.782391344348039,0.65407546914134,0.878744730937887,0.972149495371417,0.139986421625363,0,0.503347818173209,0,0,0.257259436035947,0,0.515672092277442,2.02316460859598,2.64495489636016,3.80298842103708,0.338844532069132,0,0,0,0,1.79760066311043,2.30530983192933,1.03689612308478,1.21505344498522,0.630974884054146,3.71346279724945,3.97563373712904,2.32732518508413,1.24599112323707,2.75765635983006,9.91042928994498,3.83062014255563,4.14737639791857,2.37395317914349,1.9212405156506,2.6045668527838,4.4669279840221,4.50210088025344,5.04234217663473,6.18720029494702,2.70506193518296,2.98239113320481,0.151452386666368,0.453429360640713,2.02905142091174,0.860423876981386,0,0,0,0,0.983110940922263,0,0.259786004602869,0,1.83096445709685,0,0,0,0.649473123033642,0.760079596425296,0,0.79928715803342,0.258937883647172,0.742210695324124,0.346970653532272,0.608930956624282,0.230615497256059,0.753613202763113,0.587943535678524,0.502666365318702,0.247194967734374,0,0,0.161766849947409,0,0,1.86391761218122,1.75668478206928,3.14170060220183,0.255457055208591,0.11981512450592,0,0,5.54225365797844,2.74500361691176,2.1361239859187,3.82413504423008,4.09144731728529,4.57133698031032,4.54275536589721,0,0.373220911830279,0.505445516867349,0.841767423545896,1.17108398666433,0.689706313300419,0.540186389416048,2.10986744970001,1.02054748726992,1.2811372028485,1.3118241438362,3.10444044886819,0.862271971731369,1.13463648100692,2.28736461413134,1.31517439456545,0.556094498451196,2.089512999133,1.02891068203972,1.99034266818493,0,0,0.284163499395593,0.414251545071004,0.703578179943289,0.540186184383045,0.473489471170421,0.196764231747404,0.154267112887378,0,0,0.233530684734339,0,0,0.0810688095458557,0.292399974850665,0.658650345873152,0.402619256281115,4.6263788684108,2.88132914661996,0,0.264450566663544,0.853153002140936,1.1611833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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=733 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:151401911..151401934,+ | |||
|id=chr4:151401911..151401934,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.38e-10!23;CL:0000337!3.38e-10!23;CL:0000540!3.89e-08!33;CL:0000047!3.89e-08!33;CL:0000031!3.89e-08!33;CL:0000404!3.89e-08!33;CL:0000221!8.15e-07!44;CL:0000133!8.15e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.53e-13,23;CL:0000337,8.53e-13,23;CL:0000540,1.91e-09,33;CL:0000047,1.91e-09,33;CL:0000031,1.91e-09,33;CL:0000404,1.91e-09,33;CL:0000221,5.67e-07,44;CL:0000133,5.67e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.25e-22!52;UBERON:0005068!8.25e-22!52;UBERON:0006241!8.25e-22!52;UBERON:0007135!8.25e-22!52;UBERON:0001017!1.19e-21!73;UBERON:0005743!1.19e-21!73;UBERON:0000033!8.99e-21!63;UBERON:0000073!1.58e-20!75;UBERON:0001016!1.58e-20!75;UBERON:0002616!2.78e-20!49;UBERON:0000955!6.26e-20!50;UBERON:0006238!6.26e-20!50;UBERON:0002346!5.96e-19!71;UBERON:0003075!5.96e-19!71;UBERON:0007284!5.96e-19!71;UBERON:0004121!2.33e-18!102;UBERON:0000924!2.33e-18!102;UBERON:0006601!2.33e-18!102;UBERON:0003056!3.72e-17!49;UBERON:0003080!9.80e-17!40;UBERON:0002780!4.59e-16!39;UBERON:0001890!4.59e-16!39;UBERON:0006240!4.59e-16!39;UBERON:0002020!7.73e-15!34;UBERON:0002791!3.85e-12!29;UBERON:0003528!3.85e-12!29;UBERON:0001893!3.85e-12!29;UBERON:0000153!3.08e-10!94;UBERON:0007811!1.43e-09!86;UBERON:0000956!1.53e-08!21;UBERON:0001869!1.53e-08!21;UBERON:0000203!1.53e-08!21;UBERON:0002619!2.37e-08!17;UBERON:0002021!8.59e-07!10;UBERON:0000411!8.59e-07!10;UBERON:0001950!8.59e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.62e-27,54;UBERON:0001049,1.19e-25,52;UBERON:0005068,1.19e-25,52;UBERON:0006241,1.19e-25,52;UBERON:0007135,1.19e-25,52;UBERON:0001017,1.75e-25,73;UBERON:0001016,3.53e-24,75;UBERON:0002346,7.18e-24,64;UBERON:0003075,7.18e-24,64;UBERON:0007284,7.18e-24,64;UBERON:0010371,1.98e-21,73;UBERON:0002616,4.08e-21,46;UBERON:0004121,1.50e-20,95;UBERON:0000924,1.50e-20,95;UBERON:0006601,1.50e-20,95;UBERON:0000955,2.61e-20,47;UBERON:0006238,2.61e-20,47;UBERON:0003080,5.42e-20,40;UBERON:0003056,2.57e-19,49;UBERON:0002780,4.14e-19,39;UBERON:0001890,4.14e-19,39;UBERON:0006240,4.14e-19,39;UBERON:0002020,2.02e-17,34;UBERON:0003528,7.21e-14,29;UBERON:0002791,7.21e-14,29;UBERON:0001893,7.21e-14,29;UBERON:0010314,4.35e-12,92;UBERON:0000956,3.83e-09,21;UBERON:0001869,3.83e-09,21;UBERON:0000203,3.83e-09,21;UBERON:0002619,3.94e-09,17;UBERON:0002021,1.23e-08,10;UBERON:0000411,1.23e-08,10;UBERON:0001950,1.23e-08,10;UBERON:0004111,5.90e-07,122 | |||
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| |||
|short_description=p@chr4:151401911..151401934,+ | |||
}} |
Revision as of 04:34, 14 September 2013
Short description: | p@chr4:151401911..151401934, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:151401911..151401934, + |
Coexpression cluster: | MCL_coexpression_mm9:733 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.53e-13 | 23 |
neuroblast (sensu Vertebrata) | 8.53e-13 | 23 |
neuron | 1.91e-09 | 33 |
neuronal stem cell | 1.91e-09 | 33 |
neuroblast | 1.91e-09 | 33 |
electrically signaling cell | 1.91e-09 | 33 |
ectodermal cell | 5.67e-07 | 44 |
neurectodermal cell | 5.67e-07 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.