FFCP PHASE1:Mm9::chr4:48064149..48064169,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18124|HGNC=|MCL_coexpression_id=7|UniProt=|association_with_transcript=29bp_to_ENSMUST00000133539_5end|description=CAGE_peak_9_at_Nr4a3_5end|id=chr4:48064149..48064169,+|ontology_enrichment_celltype=CL:0000791!5.76e-11!9;CL:0000789!5.76e-11!9;CL:0002420!5.76e-11!9;CL:0002419!5.76e-11!9;CL:0000790!5.76e-11!9;CL:0000624!1.01e-09!8;CL:0000838!1.42e-09!12;CL:0000542!1.31e-08!13;CL:0000051!1.31e-08!13;CL:0000084!1.68e-08!11;CL:0000827!1.68e-08!11;CL:0000893!4.65e-08!6;CL:0002489!4.65e-08!6;CL:0000898!4.65e-08!6;CL:0000809!4.65e-08!6;CL:0000810!4.65e-08!6;CL:0000895!4.65e-08!6;CL:0000808!4.65e-08!6;CL:0000894!4.65e-08!6;CL:0000806!4.65e-08!6;CL:0000807!4.65e-08!6;CL:0000805!4.65e-08!6;CL:0002425!4.65e-08!6;CL:0002436!4.65e-08!6;CL:0002427!4.65e-08!6;CL:0002428!4.65e-08!6;CL:0002429!4.65e-08!6;CL:0002433!4.65e-08!6;CL:0002431!4.65e-08!6;CL:0002432!4.65e-08!6|ontology_enrichment_celltype_v019_2=CL:0000791,7.48e-28,9;CL:0000789,7.48e-28,9;CL:0002420,7.48e-28,9;CL:0002419,7.48e-28,9;CL:0000790,7.48e-28,9;CL:0000084,9.19e-23,11;CL:0000827,9.19e-23,11;CL:0000624,5.25e-22,8;CL:0000838,7.49e-21,12;CL:0000542,3.11e-19,13;CL:0000051,3.11e-19,13;CL:0000893,3.38e-19,6;CL:0002489,3.38e-19,6;CL:0000898,3.38e-19,6;CL:0000809,3.38e-19,6;CL:0000810,3.38e-19,6;CL:0000895,3.38e-19,6;CL:0000808,3.38e-19,6;CL:0000894,3.38e-19,6;CL:0000806,3.38e-19,6;CL:0000807,3.38e-19,6;CL:0000805,3.38e-19,6;CL:0002425,3.38e-19,6;CL:0002436,3.38e-19,6;CL:0002427,3.38e-19,6;CL:0002428,3.38e-19,6;CL:0002429,3.38e-19,6;CL:0002433,3.38e-19,6;CL:0002431,3.38e-19,6;CL:0002432,3.38e-19,6;CL:0000738,1.17e-14,17;CL:0002087,1.17e-14,17;CL:0002031,7.09e-10,25;CL:0000625,2.54e-08,1;CL:0000988,1.22e-07,32;CL:0002032,1.22e-07,32;CL:0000037,1.22e-07,32;CL:0000837,1.22e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000956!1.81e-15!21;UBERON:0001869!1.81e-15!21;UBERON:0000203!1.81e-15!21;UBERON:0002791!1.31e-14!29;UBERON:0003528!1.31e-14!29;UBERON:0001893!1.31e-14!29;UBERON:0002020!8.06e-14!34;UBERON:0002780!1.35e-13!39;UBERON:0001890!1.35e-13!39;UBERON:0006240!1.35e-13!39;UBERON:0003080!4.71e-13!40;UBERON:0000153!1.58e-12!94;UBERON:0007811!3.25e-12!86;UBERON:0002619!1.66e-11!17;UBERON:0002616!2.83e-11!49;UBERON:0000955!7.00e-11!50;UBERON:0006238!7.00e-11!50;UBERON:0001049!6.69e-10!52;UBERON:0005068!6.69e-10!52;UBERON:0006241!6.69e-10!52;UBERON:0007135!6.69e-10!52;UBERON:0003056!3.21e-09!49;UBERON:0000033!2.02e-08!63;UBERON:0000064!3.06e-08!99;UBERON:0002346!5.62e-08!71;UBERON:0003075!5.62e-08!71;UBERON:0007284!5.62e-08!71;UBERON:0002021!5.71e-08!10;UBERON:0000411!5.71e-08!10;UBERON:0001950!5.71e-08!10;UBERON:0001017!1.30e-07!73;UBERON:0005743!1.30e-07!73;UBERON:0000073!3.50e-07!75;UBERON:0001016!3.50e-07!75;UBERON:0004121!4.89e-07!102;UBERON:0000924!4.89e-07!102;UBERON:0006601!4.89e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.76e-16,10;UBERON:0000411,1.76e-16,10;UBERON:0001950,1.76e-16,10;UBERON:0002619,9.15e-14,17;UBERON:0000956,4.24e-11,21;UBERON:0001869,4.24e-11,21;UBERON:0000203,4.24e-11,21;UBERON:0003528,5.83e-08,29;UBERON:0002791,5.83e-08,29;UBERON:0001893,5.83e-08,29;UBERON:0002020,9.62e-07,34|phase1_expression=0,0,0,0,0,0,0.233612640595526,0.129123323441576,42.5181940898034,34.407485369333,8.04724450659873,4.14815226775749,0.171200729931206,0.34968160967599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.388859798148567,0,0,0.838913030288682,3.62681071005672,7.73015738027667,0,0,0,0,0,0.633831403506179,0,0,0,0,0.7104801149461,0,0,0.518448061542388,0.675029691658453,0.630974884054146,0,0,0.122490799214954,0.0958454710182364,0,0,0.255374676170375,0.307213066512487,0.131886287730194,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0.186399445825301,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.445326417194474,0,0,0,0.753613202763113,0.352766121407114,0.125666591329675,0,0.289198713839823,0,0,0.220841518460394,0,0,0,0,0,0.479260498023681,0,0,0,0.457500602818626,0,0.347648640384553,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0.210289948564127,2.05809224758569,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.356737635204141,0.164549020602121,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0.169978429993855,1.25956307091292,0.829199842826543,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0.501572104035363,0.564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| ||
|EntrezGene=18124 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|UniProt= | |||
|association_with_transcript=29bp_to_ENSMUST00000133539_5end | |||
|description=CAGE_peak_9_at_Nr4a3_5end | |||
|id=chr4:48064149..48064169,+ | |||
|ontology_enrichment_celltype=CL:0000791!5.76e-11!9;CL:0000789!5.76e-11!9;CL:0002420!5.76e-11!9;CL:0002419!5.76e-11!9;CL:0000790!5.76e-11!9;CL:0000624!1.01e-09!8;CL:0000838!1.42e-09!12;CL:0000542!1.31e-08!13;CL:0000051!1.31e-08!13;CL:0000084!1.68e-08!11;CL:0000827!1.68e-08!11;CL:0000893!4.65e-08!6;CL:0002489!4.65e-08!6;CL:0000898!4.65e-08!6;CL:0000809!4.65e-08!6;CL:0000810!4.65e-08!6;CL:0000895!4.65e-08!6;CL:0000808!4.65e-08!6;CL:0000894!4.65e-08!6;CL:0000806!4.65e-08!6;CL:0000807!4.65e-08!6;CL:0000805!4.65e-08!6;CL:0002425!4.65e-08!6;CL:0002436!4.65e-08!6;CL:0002427!4.65e-08!6;CL:0002428!4.65e-08!6;CL:0002429!4.65e-08!6;CL:0002433!4.65e-08!6;CL:0002431!4.65e-08!6;CL:0002432!4.65e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.48e-28,9;CL:0000789,7.48e-28,9;CL:0002420,7.48e-28,9;CL:0002419,7.48e-28,9;CL:0000790,7.48e-28,9;CL:0000084,9.19e-23,11;CL:0000827,9.19e-23,11;CL:0000624,5.25e-22,8;CL:0000838,7.49e-21,12;CL:0000542,3.11e-19,13;CL:0000051,3.11e-19,13;CL:0000893,3.38e-19,6;CL:0002489,3.38e-19,6;CL:0000898,3.38e-19,6;CL:0000809,3.38e-19,6;CL:0000810,3.38e-19,6;CL:0000895,3.38e-19,6;CL:0000808,3.38e-19,6;CL:0000894,3.38e-19,6;CL:0000806,3.38e-19,6;CL:0000807,3.38e-19,6;CL:0000805,3.38e-19,6;CL:0002425,3.38e-19,6;CL:0002436,3.38e-19,6;CL:0002427,3.38e-19,6;CL:0002428,3.38e-19,6;CL:0002429,3.38e-19,6;CL:0002433,3.38e-19,6;CL:0002431,3.38e-19,6;CL:0002432,3.38e-19,6;CL:0000738,1.17e-14,17;CL:0002087,1.17e-14,17;CL:0002031,7.09e-10,25;CL:0000625,2.54e-08,1;CL:0000988,1.22e-07,32;CL:0002032,1.22e-07,32;CL:0000037,1.22e-07,32;CL:0000837,1.22e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!1.81e-15!21;UBERON:0001869!1.81e-15!21;UBERON:0000203!1.81e-15!21;UBERON:0002791!1.31e-14!29;UBERON:0003528!1.31e-14!29;UBERON:0001893!1.31e-14!29;UBERON:0002020!8.06e-14!34;UBERON:0002780!1.35e-13!39;UBERON:0001890!1.35e-13!39;UBERON:0006240!1.35e-13!39;UBERON:0003080!4.71e-13!40;UBERON:0000153!1.58e-12!94;UBERON:0007811!3.25e-12!86;UBERON:0002619!1.66e-11!17;UBERON:0002616!2.83e-11!49;UBERON:0000955!7.00e-11!50;UBERON:0006238!7.00e-11!50;UBERON:0001049!6.69e-10!52;UBERON:0005068!6.69e-10!52;UBERON:0006241!6.69e-10!52;UBERON:0007135!6.69e-10!52;UBERON:0003056!3.21e-09!49;UBERON:0000033!2.02e-08!63;UBERON:0000064!3.06e-08!99;UBERON:0002346!5.62e-08!71;UBERON:0003075!5.62e-08!71;UBERON:0007284!5.62e-08!71;UBERON:0002021!5.71e-08!10;UBERON:0000411!5.71e-08!10;UBERON:0001950!5.71e-08!10;UBERON:0001017!1.30e-07!73;UBERON:0005743!1.30e-07!73;UBERON:0000073!3.50e-07!75;UBERON:0001016!3.50e-07!75;UBERON:0004121!4.89e-07!102;UBERON:0000924!4.89e-07!102;UBERON:0006601!4.89e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.76e-16,10;UBERON:0000411,1.76e-16,10;UBERON:0001950,1.76e-16,10;UBERON:0002619,9.15e-14,17;UBERON:0000956,4.24e-11,21;UBERON:0001869,4.24e-11,21;UBERON:0000203,4.24e-11,21;UBERON:0003528,5.83e-08,29;UBERON:0002791,5.83e-08,29;UBERON:0001893,5.83e-08,29;UBERON:0002020,9.62e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0.129123323441576,42.5181940898034,34.407485369333,8.04724450659873,4.14815226775749,0.171200729931206,0.34968160967599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.388859798148567,0,0,0.838913030288682,3.62681071005672,7.73015738027667,0,0,0,0,0,0.633831403506179,0,0,0,0,0.7104801149461,0,0,0.518448061542388,0.675029691658453,0.630974884054146,0,0,0.122490799214954,0.0958454710182364,0,0,0.255374676170375,0.307213066512487,0.131886287730194,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0.186399445825301,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.445326417194474,0,0,0,0.753613202763113,0.352766121407114,0.125666591329675,0,0.289198713839823,0,0,0.220841518460394,0,0,0,0,0,0.479260498023681,0,0,0,0.457500602818626,0,0.347648640384553,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0.210289948564127,2.05809224758569,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.356737635204141,0.164549020602121,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0.169978429993855,1.25956307091292,0.829199842826543,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.194915761479505,0.0962118416403295,0.233753804363138,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0.501572104035363,0.564751842617067,0.460325236507177,1.14579102687879,1.71853182343688,0,0.755393897389701,0,1.35096360967266,2.26571204492102,1.03552062350364,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p9@Nr4a3 | |||
}} |
Revision as of 05:10, 14 September 2013
Short description: | p9@Nr4a3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Nr4a3_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 29bp_to_ENSMUST00000133539_5end |
EntrezGene: | Nr4a3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.76e-16 | 10 |
visual cortex | 1.76e-16 | 10 |
neocortex | 1.76e-16 | 10 |
regional part of cerebral cortex | 9.15e-14 | 17 |
cerebral cortex | 4.24e-11 | 21 |
cerebral hemisphere | 4.24e-11 | 21 |
pallium | 4.24e-11 | 21 |
brain grey matter | 5.83e-08 | 29 |
regional part of telencephalon | 5.83e-08 | 29 |
telencephalon | 5.83e-08 | 29 |
gray matter | 9.62e-07 | 34 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.