FFCP PHASE1:Hg19::chr8:59508395..59508425,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8439|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8017|TSSclassifier=S|UniProt=|association_with_transcript=35bp_to_ENST00000523177_5end|coexpression_cluster_id=C0|description=CAGE_peak_3_at_NSMAF_5end|id=chr8:59508395..59508425,-|ontology_enrichment_celltype=CL:0000766!6.23e-58!76;CL:0002057!5.44e-53!42;CL:0000557!3.68e-51!71;CL:0000839!3.15e-50!70;CL:0002194!6.57e-49!63;CL:0000576!6.57e-49!63;CL:0000040!6.57e-49!63;CL:0000559!6.57e-49!63;CL:0002009!8.53e-49!65;CL:0000860!2.08e-48!45;CL:0000763!1.08e-36!112;CL:0000049!1.08e-36!112;CL:0000738!1.60e-35!140;CL:0002031!2.67e-31!124;CL:0002087!8.44e-30!119;CL:0000037!1.32e-26!172;CL:0000566!1.32e-26!172;CL:0002032!1.57e-26!165;CL:0000837!1.57e-26!165;CL:0000988!7.54e-25!182;CL:0000048!1.25e-15!430;CL:0000723!5.58e-15!436;CL:0000134!6.32e-15!358;CL:0002320!1.29e-14!365;CL:0000034!3.82e-14!444;CL:0000219!3.25e-12!390;CL:0000063!5.83e-08!578;CL:0002371!7.93e-08!591;CL:0002393!2.49e-07!9;CL:0002397!2.49e-07!9;CL:0000144!6.50e-07!625|ontology_enrichment_celltype_v019=CL:0000860;4.31e-94;33!CL:0002057;4.31e-94;33!CL:0000473;4.31e-78;39!CL:0000234;4.31e-78;39!CL:0000576;6.98e-59;48!CL:0000766;2.85e-47;69!CL:0000763;1.86e-21;100!CL:0000094;7.96e-16;8!CL:0002087;1.75e-14;104!CL:0000738;2.41e-12;136!CL:0000767;2.14e-11;3!CL:0000081;2.37e-11;11!CL:0002393;4.49e-10;6!CL:0002397;4.49e-10;6|ontology_enrichment_celltype_v019_2=CL:0000473,5.79e-105,48;CL:0000234,5.79e-105,48;CL:0000860,2.10e-102,42;CL:0002057,2.10e-102,42;CL:0000766,4.42e-99,72;CL:0002194,8.57e-87,59;CL:0000576,8.57e-87,59;CL:0000040,8.57e-87,59;CL:0000559,8.57e-87,59;CL:0002009,1.05e-83,61;CL:0000839,5.10e-81,66;CL:0000557,1.08e-79,67;CL:0000763,3.86e-63,108;CL:0000049,3.86e-63,108;CL:0000738,1.21e-50,136;CL:0002031,4.16e-43,120;CL:0002087,6.61e-43,115;CL:0002032,2.69e-41,161;CL:0000837,2.69e-41,161;CL:0000037,3.57e-39,168;CL:0000988,1.09e-36,177;CL:0000134,3.23e-16,354;CL:0000094,8.65e-16,8;CL:0002320,1.06e-15,361;CL:0000219,6.85e-14,386;CL:0000048,2.38e-13,427;CL:0000723,5.10e-13,433;CL:0000034,1.36e-12,441;CL:0000081,2.51e-11,11;CL:0000767,2.77e-11,3|ontology_enrichment_development_v019=CL:0002057;2.30e-75;42!CL:0000049;3.70e-19;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!3.53e-47!80;UBERON:0002193!1.07e-43!112;UBERON:0001474!1.68e-42!86;UBERON:0002405!6.23e-41!115;UBERON:0002390!3.33e-40!102;UBERON:0003061!3.33e-40!102;UBERON:0004765!3.45e-37!101;UBERON:0001434!3.45e-37!101;UBERON:0002204!3.53e-24!167;UBERON:0003081!2.82e-14!216;UBERON:0002384!1.73e-13!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.81e-73,76;UBERON:0001474,4.28e-67,82;UBERON:0002405,3.16e-61,93;UBERON:0004765,2.21e-60,90;UBERON:0002390,9.43e-55,98;UBERON:0003061,9.43e-55,98;UBERON:0001434,1.75e-53,100;UBERON:0002193,1.66e-51,108;UBERON:0002204,3.55e-30,167;UBERON:0003081,1.25e-24,203;UBERON:0002384,5.31e-15,371;UBERON:0000926,2.02e-13,315;UBERON:0004120,2.02e-13,315;UBERON:0006603,2.02e-13,315|phase1_expression=0,1.07050261945492,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,2.6893005858071,0,0,0,0,0,0,0,0,0,0.305653622991805,0,0,2.36018566109342,1.15148819429164,1.23852898652861,0,0,0,0,0,0,7.20194031091441,3.60980005446255,2.38711957787437,1.79132379391939,0.971680998056939,0.257575567634187,16.1392045045317,38.5433462562586,18.436388650274,74.8421498836305,133.218395719072,202.238260194503,141.256964630176,120.907853481736,178.544083565882,634.676798236115,557.698766616426,475.34696794614,47.0605848856512,98.2462140208245,129.890174009259,491.264647255299,429.723967254889,539.600534174391,11.5447955065351,37.4991676328668,24.7210355308963,238.551994152696,333.055126893699,340.683770200579,89.6957734966573,85.0017157024928,134.657083717172,227.024813487513,512.274191658702,577.860319467055,0.845021145247767,1.27562579979026,0.419317291016752,0.898629049171961,0.150176892841506,0.64290234678832,0.285012743741249,0,0,0,0,0,0,0.400395987036012,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,1.03366703667732,0.71153252537342,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,3.9534125230819,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.721832238805369,0.462985512576611,0.570762456703795,0,0,1.96973604869918,0.234004265139238,1.78357394746474,0,0,0,0,0.290633938513962,0,1.97065295158377,0,0.207328115540772,0.288239906833923,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8439 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8017 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=35bp_to_ENST00000523177_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_NSMAF_5end | |||
|id=chr8:59508395..59508425,- | |||
|ontology_enrichment_celltype=CL:0000766!6.23e-58!76;CL:0002057!5.44e-53!42;CL:0000557!3.68e-51!71;CL:0000839!3.15e-50!70;CL:0002194!6.57e-49!63;CL:0000576!6.57e-49!63;CL:0000040!6.57e-49!63;CL:0000559!6.57e-49!63;CL:0002009!8.53e-49!65;CL:0000860!2.08e-48!45;CL:0000763!1.08e-36!112;CL:0000049!1.08e-36!112;CL:0000738!1.60e-35!140;CL:0002031!2.67e-31!124;CL:0002087!8.44e-30!119;CL:0000037!1.32e-26!172;CL:0000566!1.32e-26!172;CL:0002032!1.57e-26!165;CL:0000837!1.57e-26!165;CL:0000988!7.54e-25!182;CL:0000048!1.25e-15!430;CL:0000723!5.58e-15!436;CL:0000134!6.32e-15!358;CL:0002320!1.29e-14!365;CL:0000034!3.82e-14!444;CL:0000219!3.25e-12!390;CL:0000063!5.83e-08!578;CL:0002371!7.93e-08!591;CL:0002393!2.49e-07!9;CL:0002397!2.49e-07!9;CL:0000144!6.50e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.31e-94;33!CL:0002057;4.31e-94;33!CL:0000473;4.31e-78;39!CL:0000234;4.31e-78;39!CL:0000576;6.98e-59;48!CL:0000766;2.85e-47;69!CL:0000763;1.86e-21;100!CL:0000094;7.96e-16;8!CL:0002087;1.75e-14;104!CL:0000738;2.41e-12;136!CL:0000767;2.14e-11;3!CL:0000081;2.37e-11;11!CL:0002393;4.49e-10;6!CL:0002397;4.49e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.79e-105,48;CL:0000234,5.79e-105,48;CL:0000860,2.10e-102,42;CL:0002057,2.10e-102,42;CL:0000766,4.42e-99,72;CL:0002194,8.57e-87,59;CL:0000576,8.57e-87,59;CL:0000040,8.57e-87,59;CL:0000559,8.57e-87,59;CL:0002009,1.05e-83,61;CL:0000839,5.10e-81,66;CL:0000557,1.08e-79,67;CL:0000763,3.86e-63,108;CL:0000049,3.86e-63,108;CL:0000738,1.21e-50,136;CL:0002031,4.16e-43,120;CL:0002087,6.61e-43,115;CL:0002032,2.69e-41,161;CL:0000837,2.69e-41,161;CL:0000037,3.57e-39,168;CL:0000988,1.09e-36,177;CL:0000134,3.23e-16,354;CL:0000094,8.65e-16,8;CL:0002320,1.06e-15,361;CL:0000219,6.85e-14,386;CL:0000048,2.38e-13,427;CL:0000723,5.10e-13,433;CL:0000034,1.36e-12,441;CL:0000081,2.51e-11,11;CL:0000767,2.77e-11,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.30e-75;42!CL:0000049;3.70e-19;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.53e-47!80;UBERON:0002193!1.07e-43!112;UBERON:0001474!1.68e-42!86;UBERON:0002405!6.23e-41!115;UBERON:0002390!3.33e-40!102;UBERON:0003061!3.33e-40!102;UBERON:0004765!3.45e-37!101;UBERON:0001434!3.45e-37!101;UBERON:0002204!3.53e-24!167;UBERON:0003081!2.82e-14!216;UBERON:0002384!1.73e-13!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.81e-73,76;UBERON:0001474,4.28e-67,82;UBERON:0002405,3.16e-61,93;UBERON:0004765,2.21e-60,90;UBERON:0002390,9.43e-55,98;UBERON:0003061,9.43e-55,98;UBERON:0001434,1.75e-53,100;UBERON:0002193,1.66e-51,108;UBERON:0002204,3.55e-30,167;UBERON:0003081,1.25e-24,203;UBERON:0002384,5.31e-15,371;UBERON:0000926,2.02e-13,315;UBERON:0004120,2.02e-13,315;UBERON:0006603,2.02e-13,315 | |||
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|short_description=p3@NSMAF | |||
}} |
Revision as of 05:39, 14 September 2013
Short description: | p3@NSMAF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_NSMAF_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 35bp_to_ENST00000523177_5end |
EntrezGene: | NSMAF |
HGNC: | 8017 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.79e-105 | 48 |
phagocyte | 5.79e-105 | 48 |
classical monocyte | 2.10e-102 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.10e-102 | 42 |
myeloid leukocyte | 4.42e-99 | 72 |
monopoietic cell | 8.57e-87 | 59 |
monocyte | 8.57e-87 | 59 |
monoblast | 8.57e-87 | 59 |
promonocyte | 8.57e-87 | 59 |
macrophage dendritic cell progenitor | 1.05e-83 | 61 |
myeloid lineage restricted progenitor cell | 5.10e-81 | 66 |
granulocyte monocyte progenitor cell | 1.08e-79 | 67 |
myeloid cell | 3.86e-63 | 108 |
common myeloid progenitor | 3.86e-63 | 108 |
leukocyte | 1.21e-50 | 136 |
hematopoietic lineage restricted progenitor cell | 4.16e-43 | 120 |
nongranular leukocyte | 6.61e-43 | 115 |
hematopoietic oligopotent progenitor cell | 2.69e-41 | 161 |
hematopoietic multipotent progenitor cell | 2.69e-41 | 161 |
hematopoietic stem cell | 3.57e-39 | 168 |
hematopoietic cell | 1.09e-36 | 177 |
mesenchymal cell | 3.23e-16 | 354 |
granulocyte | 8.65e-16 | 8 |
connective tissue cell | 1.06e-15 | 361 |
motile cell | 6.85e-14 | 386 |
multi fate stem cell | 2.38e-13 | 427 |
somatic stem cell | 5.10e-13 | 433 |
stem cell | 1.36e-12 | 441 |
blood cell | 2.51e-11 | 11 |
basophil | 2.77e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.81e-73 | 76 |
bone element | 4.28e-67 | 82 |
immune system | 3.16e-61 | 93 |
skeletal element | 2.21e-60 | 90 |
hematopoietic system | 9.43e-55 | 98 |
blood island | 9.43e-55 | 98 |
skeletal system | 1.75e-53 | 100 |
hemolymphoid system | 1.66e-51 | 108 |
musculoskeletal system | 3.55e-30 | 167 |
lateral plate mesoderm | 1.25e-24 | 203 |
connective tissue | 5.31e-15 | 371 |
mesoderm | 2.02e-13 | 315 |
mesoderm-derived structure | 2.02e-13 | 315 |
presumptive mesoderm | 2.02e-13 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.