FFCP PHASE1:Mm9::chr5:122952145..122952154,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11938|HGNC=|MCL_coexpression_id=405|UniProt=F8WI94|association_with_transcript=28bp_to_ENSMUST00000031423_5end|description=CAGE_peak_3_at_Atp2a2_5end|id=chr5:122952145..122952154,-|ontology_enrichment_celltype=CL:0000117!9.95e-09!23;CL:0000337!9.95e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,8.74e-09,23;CL:0000337,8.74e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.85e-18!52;UBERON:0005068!2.85e-18!52;UBERON:0006241!2.85e-18!52;UBERON:0007135!2.85e-18!52;UBERON:0000955!2.43e-17!50;UBERON:0006238!2.43e-17!50;UBERON:0002616!8.72e-17!49;UBERON:0000033!1.09e-16!63;UBERON:0001017!1.66e-15!73;UBERON:0005743!1.66e-15!73;UBERON:0004111!1.95e-15!122;UBERON:0002346!3.02e-15!71;UBERON:0003075!3.02e-15!71;UBERON:0007284!3.02e-15!71;UBERON:0000073!4.55e-15!75;UBERON:0001016!4.55e-15!75;UBERON:0002020!1.89e-14!34;UBERON:0000025!2.57e-14!114;UBERON:0004121!3.19e-13!102;UBERON:0000924!3.19e-13!102;UBERON:0006601!3.19e-13!102;UBERON:0003080!6.33e-13!40;UBERON:0002780!2.08e-12!39;UBERON:0001890!2.08e-12!39;UBERON:0006240!2.08e-12!39;UBERON:0003056!5.52e-12!49;UBERON:0002791!8.12e-12!29;UBERON:0003528!8.12e-12!29;UBERON:0001893!8.12e-12!29;UBERON:0000119!2.18e-09!183;UBERON:0000483!2.74e-09!181;UBERON:0007811!1.05e-08!86;UBERON:0000956!3.83e-08!21;UBERON:0001869!3.83e-08!21;UBERON:0000203!3.83e-08!21;UBERON:0000477!1.45e-07!154;UBERON:0002021!1.68e-07!10;UBERON:0000411!1.68e-07!10;UBERON:0001950!1.68e-07!10;UBERON:0002619!4.03e-07!17;UBERON:0007100!5.12e-07!18;UBERON:0000948!5.12e-07!18;UBERON:0005498!5.12e-07!18;UBERON:0004140!5.12e-07!18;UBERON:0009881!5.12e-07!18;UBERON:0004141!5.12e-07!18;UBERON:0003084!5.12e-07!18;UBERON:0007005!5.12e-07!18;UBERON:0004139!5.12e-07!18;UBERON:0004291!5.12e-07!18;UBERON:0000153!6.38e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.71e-23,92;UBERON:0000073,5.30e-20,54;UBERON:0001049,1.15e-18,52;UBERON:0005068,1.15e-18,52;UBERON:0006241,1.15e-18,52;UBERON:0007135,1.15e-18,52;UBERON:0002346,1.52e-16,64;UBERON:0003075,1.52e-16,64;UBERON:0007284,1.52e-16,64;UBERON:0000955,6.31e-16,47;UBERON:0006238,6.31e-16,47;UBERON:0004111,7.98e-16,122;UBERON:0001017,1.08e-15,73;UBERON:0002616,2.31e-15,46;UBERON:0001016,3.01e-15,75;UBERON:0010371,4.68e-15,73;UBERON:0002020,9.71e-15,34;UBERON:0000025,1.17e-14,114;UBERON:0004121,1.46e-13,95;UBERON:0000924,1.46e-13,95;UBERON:0006601,1.46e-13,95;UBERON:0003080,4.26e-13,40;UBERON:0002780,1.46e-12,39;UBERON:0001890,1.46e-12,39;UBERON:0006240,1.46e-12,39;UBERON:0003528,5.36e-12,29;UBERON:0002791,5.36e-12,29;UBERON:0001893,5.36e-12,29;UBERON:0003056,6.45e-12,49;UBERON:0000119,6.14e-10,176;UBERON:0000483,7.70e-10,174;UBERON:0000956,3.58e-08,21;UBERON:0001869,3.58e-08,21;UBERON:0000203,3.58e-08,21;UBERON:0002021,8.84e-08,10;UBERON:0000411,8.84e-08,10;UBERON:0001950,8.84e-08,10;UBERON:0007100,1.73e-07,18;UBERON:0000948,1.73e-07,18;UBERON:0005498,1.73e-07,18;UBERON:0004140,1.73e-07,18;UBERON:0009881,1.73e-07,18;UBERON:0004141,1.73e-07,18;UBERON:0003084,1.73e-07,18;UBERON:0007005,1.73e-07,18;UBERON:0004139,1.73e-07,18;UBERON:0004291,1.73e-07,18;UBERON:0002619,4.25e-07,17|phase1_expression=2.24208385946712,3.14077866875425,1.81999695755814,1.51232105653415,4.00716583957078,1.6787927191189,1.86890112476421,0.516493293766305,0.84473233291,0.468129052643987,0.513653904676515,1.43589886191606,1.02720437958723,0.437102012094987,0.666219523631325,0.607425802169478,0,0.315462165358238,0.411343300817216,0.42438965179803,2.21112554392781,1.29078236561151,0,0.319984845586813,1.83527424853736,1.14846392823004,0,1.50829862880122,2.28028103347649,1.51218077855958,2.21730510655305,0.635030673459631,0,0,1.44425809875637,1.32987716286794,0.612508068787107,0.418531630736908,0,0,0.588231488031014,0.683045484958446,0,0.503587271902309,1.11514624341466,1.65192076945513,2.34717403304412,1.52617609466313,1.5378032791413,1.1665793944457,0.839918529752175,0,0.671130424230945,0.725362142011344,0,0.257259436035947,0.573066879877513,1.54701627683233,2.42779753031517,1.5869729378161,5.70448263155561,1.35537812827653,1.77858959222228,2.2497492932035,0,2.1314403448383,1.19840044207362,0.768436610643109,2.07379224616955,2.43010688997043,1.89292465216244,8.85518051651791,7.50953039235486,2.44981598429908,2.30029130443767,0.919218786610021,5.50579404996943,8.81042632787795,9.21639199537461,4.08847491963601,3.47653045689157,4.68822033501084,5.58365998002762,4.50210088025344,5.50073691996516,8.54422897873636,6.40672563595963,4.10078780815661,1.36307147999731,1.13357340160178,0,1.72084775396277,2.03991400112325,0,1.94932925234301,0.448026887097336,0.421333260395256,0.681721290312231,0.259786004602869,0.70667914902068,2.25349471642689,1.28326477414318,0,0,0.865964164044856,2.53359865475099,0.505524445014783,1.59857431606684,0.517875767294343,1.63286352971307,1.21439728736295,1.82679286987285,1.15307748628029,0.904335843315735,1.88141931417128,0.628332956648377,1.48316980640624,0.578397427679647,0.884610551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| ||
|EntrezGene=11938 | |||
|HGNC= | |||
|MCL_coexpression_id=405 | |||
|UniProt=F8WI94 | |||
|association_with_transcript=28bp_to_ENSMUST00000031423_5end | |||
|description=CAGE_peak_3_at_Atp2a2_5end | |||
|id=chr5:122952145..122952154,- | |||
|ontology_enrichment_celltype=CL:0000117!9.95e-09!23;CL:0000337!9.95e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.74e-09,23;CL:0000337,8.74e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.85e-18!52;UBERON:0005068!2.85e-18!52;UBERON:0006241!2.85e-18!52;UBERON:0007135!2.85e-18!52;UBERON:0000955!2.43e-17!50;UBERON:0006238!2.43e-17!50;UBERON:0002616!8.72e-17!49;UBERON:0000033!1.09e-16!63;UBERON:0001017!1.66e-15!73;UBERON:0005743!1.66e-15!73;UBERON:0004111!1.95e-15!122;UBERON:0002346!3.02e-15!71;UBERON:0003075!3.02e-15!71;UBERON:0007284!3.02e-15!71;UBERON:0000073!4.55e-15!75;UBERON:0001016!4.55e-15!75;UBERON:0002020!1.89e-14!34;UBERON:0000025!2.57e-14!114;UBERON:0004121!3.19e-13!102;UBERON:0000924!3.19e-13!102;UBERON:0006601!3.19e-13!102;UBERON:0003080!6.33e-13!40;UBERON:0002780!2.08e-12!39;UBERON:0001890!2.08e-12!39;UBERON:0006240!2.08e-12!39;UBERON:0003056!5.52e-12!49;UBERON:0002791!8.12e-12!29;UBERON:0003528!8.12e-12!29;UBERON:0001893!8.12e-12!29;UBERON:0000119!2.18e-09!183;UBERON:0000483!2.74e-09!181;UBERON:0007811!1.05e-08!86;UBERON:0000956!3.83e-08!21;UBERON:0001869!3.83e-08!21;UBERON:0000203!3.83e-08!21;UBERON:0000477!1.45e-07!154;UBERON:0002021!1.68e-07!10;UBERON:0000411!1.68e-07!10;UBERON:0001950!1.68e-07!10;UBERON:0002619!4.03e-07!17;UBERON:0007100!5.12e-07!18;UBERON:0000948!5.12e-07!18;UBERON:0005498!5.12e-07!18;UBERON:0004140!5.12e-07!18;UBERON:0009881!5.12e-07!18;UBERON:0004141!5.12e-07!18;UBERON:0003084!5.12e-07!18;UBERON:0007005!5.12e-07!18;UBERON:0004139!5.12e-07!18;UBERON:0004291!5.12e-07!18;UBERON:0000153!6.38e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.71e-23,92;UBERON:0000073,5.30e-20,54;UBERON:0001049,1.15e-18,52;UBERON:0005068,1.15e-18,52;UBERON:0006241,1.15e-18,52;UBERON:0007135,1.15e-18,52;UBERON:0002346,1.52e-16,64;UBERON:0003075,1.52e-16,64;UBERON:0007284,1.52e-16,64;UBERON:0000955,6.31e-16,47;UBERON:0006238,6.31e-16,47;UBERON:0004111,7.98e-16,122;UBERON:0001017,1.08e-15,73;UBERON:0002616,2.31e-15,46;UBERON:0001016,3.01e-15,75;UBERON:0010371,4.68e-15,73;UBERON:0002020,9.71e-15,34;UBERON:0000025,1.17e-14,114;UBERON:0004121,1.46e-13,95;UBERON:0000924,1.46e-13,95;UBERON:0006601,1.46e-13,95;UBERON:0003080,4.26e-13,40;UBERON:0002780,1.46e-12,39;UBERON:0001890,1.46e-12,39;UBERON:0006240,1.46e-12,39;UBERON:0003528,5.36e-12,29;UBERON:0002791,5.36e-12,29;UBERON:0001893,5.36e-12,29;UBERON:0003056,6.45e-12,49;UBERON:0000119,6.14e-10,176;UBERON:0000483,7.70e-10,174;UBERON:0000956,3.58e-08,21;UBERON:0001869,3.58e-08,21;UBERON:0000203,3.58e-08,21;UBERON:0002021,8.84e-08,10;UBERON:0000411,8.84e-08,10;UBERON:0001950,8.84e-08,10;UBERON:0007100,1.73e-07,18;UBERON:0000948,1.73e-07,18;UBERON:0005498,1.73e-07,18;UBERON:0004140,1.73e-07,18;UBERON:0009881,1.73e-07,18;UBERON:0004141,1.73e-07,18;UBERON:0003084,1.73e-07,18;UBERON:0007005,1.73e-07,18;UBERON:0004139,1.73e-07,18;UBERON:0004291,1.73e-07,18;UBERON:0002619,4.25e-07,17 | |||
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| |||
|short_description=p3@Atp2a2 | |||
}} |
Revision as of 06:20, 14 September 2013
Short description: | p3@Atp2a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Atp2a2_5end |
Coexpression cluster: | MCL_coexpression_mm9:405 |
Association with transcript: | 28bp_to_ENSMUST00000031423_5end |
EntrezGene: | Atp2a2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.74e-09 | 23 |
neuroblast (sensu Vertebrata) | 8.74e-09 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.