FFCP PHASE1:Mm9::chr5:143040448..143040453,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=612|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:143040448..143040453,-|id=chr5:143040448..143040453,-|ontology_enrichment_celltype=CL:0000221!6.21e-14!44;CL:0000133!6.21e-14!44;CL:0000117!2.20e-13!23;CL:0000337!2.20e-13!23;CL:0002319!2.49e-13!43;CL:0000540!4.97e-11!33;CL:0000047!4.97e-11!33;CL:0000031!4.97e-11!33;CL:0000404!4.97e-11!33;CL:0000055!1.13e-09!50;CL:0000393!7.85e-08!39;CL:0000211!7.85e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,4.85e-14,23;CL:0000337,4.85e-14,23;CL:0000221,1.16e-13,44;CL:0000133,1.16e-13,44;CL:0002319,9.50e-13,43;CL:0000540,1.60e-08,33;CL:0000047,1.60e-08,33;CL:0000031,1.60e-08,33;CL:0000404,1.60e-08,33;CL:0002453,2.84e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.42e-30!73;UBERON:0005743!3.42e-30!73;UBERON:0000073!1.50e-29!75;UBERON:0001016!1.50e-29!75;UBERON:0001049!4.64e-26!52;UBERON:0005068!4.64e-26!52;UBERON:0006241!4.64e-26!52;UBERON:0007135!4.64e-26!52;UBERON:0000955!1.68e-24!50;UBERON:0006238!1.68e-24!50;UBERON:0002616!8.71e-24!49;UBERON:0004121!1.41e-23!102;UBERON:0000924!1.41e-23!102;UBERON:0006601!1.41e-23!102;UBERON:0002346!5.84e-23!71;UBERON:0003075!5.84e-23!71;UBERON:0007284!5.84e-23!71;UBERON:0002020!3.75e-21!34;UBERON:0000033!7.20e-21!63;UBERON:0003080!3.50e-19!40;UBERON:0002780!1.03e-18!39;UBERON:0001890!1.03e-18!39;UBERON:0006240!1.03e-18!39;UBERON:0002791!2.94e-17!29;UBERON:0003528!2.94e-17!29;UBERON:0001893!2.94e-17!29;UBERON:0003056!4.51e-16!49;UBERON:0000956!1.90e-12!21;UBERON:0001869!1.90e-12!21;UBERON:0000203!1.90e-12!21;UBERON:0007811!4.75e-11!86;UBERON:0000025!3.26e-10!114;UBERON:0002619!5.34e-10!17;UBERON:0004111!2.37e-09!122;UBERON:0000153!1.28e-08!94;UBERON:0002021!5.30e-08!10;UBERON:0000411!5.30e-08!10;UBERON:0001950!5.30e-08!10;UBERON:0003076!2.09e-07!12;UBERON:0003057!2.09e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.36e-26,54;UBERON:0001017,2.37e-24,73;UBERON:0002020,1.21e-23,34;UBERON:0001016,2.05e-23,75;UBERON:0001049,2.54e-22,52;UBERON:0005068,2.54e-22,52;UBERON:0006241,2.54e-22,52;UBERON:0007135,2.54e-22,52;UBERON:0000955,1.79e-19,47;UBERON:0006238,1.79e-19,47;UBERON:0003528,7.40e-19,29;UBERON:0002791,7.40e-19,29;UBERON:0001893,7.40e-19,29;UBERON:0002616,2.02e-18,46;UBERON:0004121,2.15e-17,95;UBERON:0000924,2.15e-17,95;UBERON:0006601,2.15e-17,95;UBERON:0002346,1.71e-16,64;UBERON:0003075,1.71e-16,64;UBERON:0007284,1.71e-16,64;UBERON:0002780,7.47e-16,39;UBERON:0001890,7.47e-16,39;UBERON:0006240,7.47e-16,39;UBERON:0003080,2.69e-15,40;UBERON:0000956,2.82e-15,21;UBERON:0001869,2.82e-15,21;UBERON:0000203,2.82e-15,21;UBERON:0010371,1.53e-14,73;UBERON:0003056,2.48e-11,49;UBERON:0002619,5.51e-11,17;UBERON:0010314,1.14e-10,92;UBERON:0000025,6.05e-10,114;UBERON:0002021,1.81e-09,10;UBERON:0000411,1.81e-09,10;UBERON:0001950,1.81e-09,10;UBERON:0004111,2.01e-09,122;UBERON:0000473,3.04e-09,14;UBERON:0003135,1.76e-08,15;UBERON:0003076,7.56e-08,12;UBERON:0003057,7.56e-08,12;UBERON:0003101,8.18e-08,16;UBERON:0000079,8.18e-08,16;UBERON:0004176,3.15e-07,17;UBERON:0009196,3.15e-07,17;UBERON:0009117,3.15e-07,17|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8343270329458,1.97717564461025,2.52758868796568,1.67983705950435,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,1.26766280701236,0,0,0,0,0,5.39280198933128,7.30014780110954,1.14058573539325,1.62007125998029,2.10324961351382,9.99778445413313,5.07997644188711,0.367472397644862,0.766763768145891,0,1.10115880999389,2.42605942361857,2.4577045320999,0.527545150920775,1.37231465403614,1.56274011167028,2.51264699101243,6.75315132038016,5.04234217663473,2.06240009831567,3.98640706237488,0.931997229126503,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,1.83096445709685,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.346970653532272,0,0.230615497256059,0.150722640552623,0.23517741427141,2.01066546127481,0,0.144599356919912,0,0,0,0,0,0.878342391034642,1.8850203613211,0,0,0,0,0.898743836428936,0.915001205637253,0.753926112677186,2.08589184230732,2.04572365864264,3.94797284663164,3.0825839982874,0,0,0,0.210441855886474,0.130120442962704,0,0,0,0,0,0.0937017245597288,0.776110112217047,0,0,0,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,1.26173969138476,1.54356918568927,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0.405720242777006,0,1.2731292589071,0.287696137450811,0.162135226775035,1.37280706594041,8.62609239164127,2.23284568601102,2.18426371180192,0,0.538192240565737,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,2.46144541843627,0,0,0.315508219416257,0,0,0,0.668396022247182,0.566153061577665,0,0.584511715822624,0,1.92792789853084,0.141940085208269,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0.363533729477506,1.06949213515416,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0.354680467284547,0,0.987294123612726,0.913394847343798,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0.269728692769641,0.247960367176008,0,0,0,3.38215763210514,1.79419855252775,1.65458490457098,0.777804753376191,2.32487682259916,2.36538575687089,1.5256441023948,1.43224823328345,3.46035836604846,4.59009829569411,1.15212002503146,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,0.920650473014354,2.29158205375759,3.60891682921744,4.11049511862385,1.5107877947794,6.75022500231806,1.80128481289688,0.906284817968409,1.55328093525546,0.103787347584177,0.399024873401031,0,0.243106717068294,0.209613162627982,0.551530525350042,0.666740183404846,0.206035057238894,0.320919209591815,0.252697211763798,0,0.188626341386076,0,0.128050304809739,0.114870937911227,0,0,0.192909220463705,0,0.441596760403192,0,0.177475806159338,0.476872379894642,0.290692833264657,0.376437521661322,0.338458431566706,0.182927972872773,1.05227884575137,0.135804113845862,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p@chr5:143040448..143040453,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=612 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:143040448..143040453,- | |||
|id=chr5:143040448..143040453,- | |||
|ontology_enrichment_celltype=CL:0000221!6.21e-14!44;CL:0000133!6.21e-14!44;CL:0000117!2.20e-13!23;CL:0000337!2.20e-13!23;CL:0002319!2.49e-13!43;CL:0000540!4.97e-11!33;CL:0000047!4.97e-11!33;CL:0000031!4.97e-11!33;CL:0000404!4.97e-11!33;CL:0000055!1.13e-09!50;CL:0000393!7.85e-08!39;CL:0000211!7.85e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.85e-14,23;CL:0000337,4.85e-14,23;CL:0000221,1.16e-13,44;CL:0000133,1.16e-13,44;CL:0002319,9.50e-13,43;CL:0000540,1.60e-08,33;CL:0000047,1.60e-08,33;CL:0000031,1.60e-08,33;CL:0000404,1.60e-08,33;CL:0002453,2.84e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.42e-30!73;UBERON:0005743!3.42e-30!73;UBERON:0000073!1.50e-29!75;UBERON:0001016!1.50e-29!75;UBERON:0001049!4.64e-26!52;UBERON:0005068!4.64e-26!52;UBERON:0006241!4.64e-26!52;UBERON:0007135!4.64e-26!52;UBERON:0000955!1.68e-24!50;UBERON:0006238!1.68e-24!50;UBERON:0002616!8.71e-24!49;UBERON:0004121!1.41e-23!102;UBERON:0000924!1.41e-23!102;UBERON:0006601!1.41e-23!102;UBERON:0002346!5.84e-23!71;UBERON:0003075!5.84e-23!71;UBERON:0007284!5.84e-23!71;UBERON:0002020!3.75e-21!34;UBERON:0000033!7.20e-21!63;UBERON:0003080!3.50e-19!40;UBERON:0002780!1.03e-18!39;UBERON:0001890!1.03e-18!39;UBERON:0006240!1.03e-18!39;UBERON:0002791!2.94e-17!29;UBERON:0003528!2.94e-17!29;UBERON:0001893!2.94e-17!29;UBERON:0003056!4.51e-16!49;UBERON:0000956!1.90e-12!21;UBERON:0001869!1.90e-12!21;UBERON:0000203!1.90e-12!21;UBERON:0007811!4.75e-11!86;UBERON:0000025!3.26e-10!114;UBERON:0002619!5.34e-10!17;UBERON:0004111!2.37e-09!122;UBERON:0000153!1.28e-08!94;UBERON:0002021!5.30e-08!10;UBERON:0000411!5.30e-08!10;UBERON:0001950!5.30e-08!10;UBERON:0003076!2.09e-07!12;UBERON:0003057!2.09e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.36e-26,54;UBERON:0001017,2.37e-24,73;UBERON:0002020,1.21e-23,34;UBERON:0001016,2.05e-23,75;UBERON:0001049,2.54e-22,52;UBERON:0005068,2.54e-22,52;UBERON:0006241,2.54e-22,52;UBERON:0007135,2.54e-22,52;UBERON:0000955,1.79e-19,47;UBERON:0006238,1.79e-19,47;UBERON:0003528,7.40e-19,29;UBERON:0002791,7.40e-19,29;UBERON:0001893,7.40e-19,29;UBERON:0002616,2.02e-18,46;UBERON:0004121,2.15e-17,95;UBERON:0000924,2.15e-17,95;UBERON:0006601,2.15e-17,95;UBERON:0002346,1.71e-16,64;UBERON:0003075,1.71e-16,64;UBERON:0007284,1.71e-16,64;UBERON:0002780,7.47e-16,39;UBERON:0001890,7.47e-16,39;UBERON:0006240,7.47e-16,39;UBERON:0003080,2.69e-15,40;UBERON:0000956,2.82e-15,21;UBERON:0001869,2.82e-15,21;UBERON:0000203,2.82e-15,21;UBERON:0010371,1.53e-14,73;UBERON:0003056,2.48e-11,49;UBERON:0002619,5.51e-11,17;UBERON:0010314,1.14e-10,92;UBERON:0000025,6.05e-10,114;UBERON:0002021,1.81e-09,10;UBERON:0000411,1.81e-09,10;UBERON:0001950,1.81e-09,10;UBERON:0004111,2.01e-09,122;UBERON:0000473,3.04e-09,14;UBERON:0003135,1.76e-08,15;UBERON:0003076,7.56e-08,12;UBERON:0003057,7.56e-08,12;UBERON:0003101,8.18e-08,16;UBERON:0000079,8.18e-08,16;UBERON:0004176,3.15e-07,17;UBERON:0009196,3.15e-07,17;UBERON:0009117,3.15e-07,17 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8343270329458,1.97717564461025,2.52758868796568,1.67983705950435,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,1.26766280701236,0,0,0,0,0,5.39280198933128,7.30014780110954,1.14058573539325,1.62007125998029,2.10324961351382,9.99778445413313,5.07997644188711,0.367472397644862,0.766763768145891,0,1.10115880999389,2.42605942361857,2.4577045320999,0.527545150920775,1.37231465403614,1.56274011167028,2.51264699101243,6.75315132038016,5.04234217663473,2.06240009831567,3.98640706237488,0.931997229126503,0,0.151143120213571,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,1.83096445709685,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0.346970653532272,0,0.230615497256059,0.150722640552623,0.23517741427141,2.01066546127481,0,0.144599356919912,0,0,0,0,0,0.878342391034642,1.8850203613211,0,0,0,0,0.898743836428936,0.915001205637253,0.753926112677186,2.08589184230732,2.04572365864264,3.94797284663164,3.0825839982874,0,0,0,0.210441855886474,0.130120442962704,0,0,0,0,0,0.0937017245597288,0.776110112217047,0,0,0,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,1.26173969138476,1.54356918568927,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0.405720242777006,0,1.2731292589071,0.287696137450811,0.162135226775035,1.37280706594041,8.62609239164127,2.23284568601102,2.18426371180192,0,0.538192240565737,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,2.46144541843627,0,0,0.315508219416257,0,0,0,0.668396022247182,0.566153061577665,0,0.584511715822624,0,1.92792789853084,0.141940085208269,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0.363533729477506,1.06949213515416,0,0,0,0.340439605753788,0.18006109403131,0,0.214337035031592,0.354680467284547,0,0.987294123612726,0.913394847343798,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.218362563746178,0.269728692769641,0.247960367176008,0,0,0,3.38215763210514,1.79419855252775,1.65458490457098,0.777804753376191,2.32487682259916,2.36538575687089,1.5256441023948,1.43224823328345,3.46035836604846,4.59009829569411,1.15212002503146,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,0.920650473014354,2.29158205375759,3.60891682921744,4.11049511862385,1.5107877947794,6.75022500231806,1.80128481289688,0.906284817968409,1.55328093525546,0.103787347584177,0.399024873401031,0,0.243106717068294,0.209613162627982,0.551530525350042,0.666740183404846,0.206035057238894,0.320919209591815,0.252697211763798,0,0.188626341386076,0,0.128050304809739,0.114870937911227,0,0,0.192909220463705,0,0.441596760403192,0,0.177475806159338,0.476872379894642,0.290692833264657,0.376437521661322,0.338458431566706,0.182927972872773,1.05227884575137,0.135804113845862,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr5:143040448..143040453,- | |||
}} |
Revision as of 06:55, 14 September 2013
Short description: | p@chr5:143040448..143040453, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:143040448..143040453, - |
Coexpression cluster: | MCL_coexpression_mm9:612 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.85e-14 | 23 |
neuroblast (sensu Vertebrata) | 4.85e-14 | 23 |
ectodermal cell | 1.16e-13 | 44 |
neurectodermal cell | 1.16e-13 | 44 |
neural cell | 9.50e-13 | 43 |
neuron | 1.60e-08 | 33 |
neuronal stem cell | 1.60e-08 | 33 |
neuroblast | 1.60e-08 | 33 |
electrically signaling cell | 1.60e-08 | 33 |
oligodendrocyte precursor cell | 2.84e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.