FFCP PHASE1:Mm9::chr5:49916048..49916129,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=80334|HGNC=|MCL_coexpression_id=1|UniProt=Q6PHZ8|association_with_transcript=-108bp_to_ENSMUST00000087395,ENSMUST00000101215_5end|description=CAGE_peak_1_at_Kcnip4_5end|id=chr5:49916048..49916129,-|ontology_enrichment_celltype=CL:0000117!1.07e-09!23;CL:0000337!1.07e-09!23;CL:0000540!4.61e-07!33;CL:0000047!4.61e-07!33;CL:0000031!4.61e-07!33;CL:0000404!4.61e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.64e-07,23;CL:0000337,1.64e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.96e-23!71;UBERON:0003075!1.96e-23!71;UBERON:0007284!1.96e-23!71;UBERON:0000033!6.97e-22!63;UBERON:0001049!5.89e-21!52;UBERON:0005068!5.89e-21!52;UBERON:0006241!5.89e-21!52;UBERON:0007135!5.89e-21!52;UBERON:0004121!2.96e-20!102;UBERON:0000924!2.96e-20!102;UBERON:0006601!2.96e-20!102;UBERON:0001017!4.32e-20!73;UBERON:0005743!4.32e-20!73;UBERON:0000073!5.81e-20!75;UBERON:0001016!5.81e-20!75;UBERON:0000955!6.43e-20!50;UBERON:0006238!6.43e-20!50;UBERON:0003056!7.69e-20!49;UBERON:0002616!2.83e-19!49;UBERON:0002020!1.13e-16!34;UBERON:0003080!4.77e-16!40;UBERON:0002780!2.31e-15!39;UBERON:0001890!2.31e-15!39;UBERON:0006240!2.31e-15!39;UBERON:0002791!9.99e-14!29;UBERON:0003528!9.99e-14!29;UBERON:0001893!9.99e-14!29;UBERON:0000153!1.10e-10!94;UBERON:0007811!2.62e-10!86;UBERON:0000956!3.63e-10!21;UBERON:0001869!3.63e-10!21;UBERON:0000203!3.63e-10!21;UBERON:0002619!2.75e-09!17;UBERON:0002021!5.46e-09!10;UBERON:0000411!5.46e-09!10;UBERON:0001950!5.46e-09!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.38e-26,54;UBERON:0002346,3.24e-26,64;UBERON:0003075,3.24e-26,64;UBERON:0007284,3.24e-26,64;UBERON:0001049,2.24e-24,52;UBERON:0005068,2.24e-24,52;UBERON:0006241,2.24e-24,52;UBERON:0007135,2.24e-24,52;UBERON:0010371,5.38e-21,73;UBERON:0003056,2.16e-20,49;UBERON:0000955,4.05e-20,47;UBERON:0006238,4.05e-20,47;UBERON:0002616,2.93e-19,46;UBERON:0001017,5.92e-19,73;UBERON:0002020,2.41e-18,34;UBERON:0001016,4.80e-18,75;UBERON:0004121,2.12e-17,95;UBERON:0000924,2.12e-17,95;UBERON:0006601,2.12e-17,95;UBERON:0003080,9.25e-17,40;UBERON:0002780,7.57e-16,39;UBERON:0001890,7.57e-16,39;UBERON:0006240,7.57e-16,39;UBERON:0010314,2.70e-14,92;UBERON:0003528,2.91e-14,29;UBERON:0002791,2.91e-14,29;UBERON:0001893,2.91e-14,29;UBERON:0002021,1.70e-12,10;UBERON:0000411,1.70e-12,10;UBERON:0001950,1.70e-12,10;UBERON:0002619,1.69e-11,17;UBERON:0000956,3.90e-11,21;UBERON:0001869,3.90e-11,21;UBERON:0000203,3.90e-11,21;UBERON:0003076,2.42e-08,12;UBERON:0003057,2.42e-08,12|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5424026158329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.809265843438391,1.05798195854407,0.633831403506179,0,0,0,0,0,0.599200221036809,0.384218305321555,1.14058573539325,0.270011876663381,0.630974884054146,3.99911378165325,4.19650227808066,1.5923803897944,0.766763768145891,1.83843757322004,20.9220173898839,36.2632040161933,25.9595041203051,1.31886287730194,0.823388792421687,0.52091337055676,17.588528937087,20.2594539611405,25.9757021220577,9.42811473515737,6.83384067835694,5.40558392893372,0.227178579999552,0.151143120213571,0.579728977403356,0,0,0,0,0,2.24711072210803,0,0,0,0.14084341977668,0,0,0,0,0,0,1.7127581957859,0,1.7813056687779,0.173485326766136,0,0.461230994512117,0.60289056221049,0.823120949949934,0.376999773989026,0,0,0,0.161766849947409,0,0,0,102.473278954042,94.6699114796817,0,0,0,0,37.5974504906105,29.2800385803921,4.77486538028885,86.5645114557537,77.2260681137598,45.2977937139841,43.8051410282946,0.203678727700633,0.248813941220186,1.51633655060205,6.10281382070775,0.390361328888111,1.60931473103431,0.720248519221397,1.80845781402858,2.04109497453984,3.07472928683639,2.71735001223214,23.5420067372504,0,0.378212160335639,1.05570674498369,0.219195732427575,1.39023624612799,1.74126083261083,0.411564272815887,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,69.395683026162,2.26390147234426,0,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0,0,0,0,0,0.114248512609729,0,0,0,0.210407459670956,0,0,0,0,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,3.32555742299888,0.189491411770485,0.162964976442026,0,0,0.502518772325447,0.714130922658041,0.195133647857799,0.472905432318573,0.8858587585951,0.797273843287435,1.3109065177259,0.863424909329478,1.59113964439663,0,0,0,0,25.6880943980467,22.6218555122952,0,0,0,0.390438744296638,0,0,0.445597348164788,0,0.404810701674894,0.292255857911312,0.395287777946524,15.4234231882467,0.567760340833074,0,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0.540183282093931,0.646793418913773,3.00071849044229,2.83744373827638,1.60531935841864,1.81003922662333,0,0,0,0,0.16488625294148,0.322928853391811,0.120625849856312,0,0,0,21.5093350332191,0,0.206386867963223,0,0,0,0,0,0,0,1.90934123603023,0.158167996790568,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| ||
|EntrezGene=80334 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q6PHZ8 | |||
|association_with_transcript=-108bp_to_ENSMUST00000087395,ENSMUST00000101215_5end | |||
|description=CAGE_peak_1_at_Kcnip4_5end | |||
|id=chr5:49916048..49916129,- | |||
|ontology_enrichment_celltype=CL:0000117!1.07e-09!23;CL:0000337!1.07e-09!23;CL:0000540!4.61e-07!33;CL:0000047!4.61e-07!33;CL:0000031!4.61e-07!33;CL:0000404!4.61e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.64e-07,23;CL:0000337,1.64e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.96e-23!71;UBERON:0003075!1.96e-23!71;UBERON:0007284!1.96e-23!71;UBERON:0000033!6.97e-22!63;UBERON:0001049!5.89e-21!52;UBERON:0005068!5.89e-21!52;UBERON:0006241!5.89e-21!52;UBERON:0007135!5.89e-21!52;UBERON:0004121!2.96e-20!102;UBERON:0000924!2.96e-20!102;UBERON:0006601!2.96e-20!102;UBERON:0001017!4.32e-20!73;UBERON:0005743!4.32e-20!73;UBERON:0000073!5.81e-20!75;UBERON:0001016!5.81e-20!75;UBERON:0000955!6.43e-20!50;UBERON:0006238!6.43e-20!50;UBERON:0003056!7.69e-20!49;UBERON:0002616!2.83e-19!49;UBERON:0002020!1.13e-16!34;UBERON:0003080!4.77e-16!40;UBERON:0002780!2.31e-15!39;UBERON:0001890!2.31e-15!39;UBERON:0006240!2.31e-15!39;UBERON:0002791!9.99e-14!29;UBERON:0003528!9.99e-14!29;UBERON:0001893!9.99e-14!29;UBERON:0000153!1.10e-10!94;UBERON:0007811!2.62e-10!86;UBERON:0000956!3.63e-10!21;UBERON:0001869!3.63e-10!21;UBERON:0000203!3.63e-10!21;UBERON:0002619!2.75e-09!17;UBERON:0002021!5.46e-09!10;UBERON:0000411!5.46e-09!10;UBERON:0001950!5.46e-09!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.38e-26,54;UBERON:0002346,3.24e-26,64;UBERON:0003075,3.24e-26,64;UBERON:0007284,3.24e-26,64;UBERON:0001049,2.24e-24,52;UBERON:0005068,2.24e-24,52;UBERON:0006241,2.24e-24,52;UBERON:0007135,2.24e-24,52;UBERON:0010371,5.38e-21,73;UBERON:0003056,2.16e-20,49;UBERON:0000955,4.05e-20,47;UBERON:0006238,4.05e-20,47;UBERON:0002616,2.93e-19,46;UBERON:0001017,5.92e-19,73;UBERON:0002020,2.41e-18,34;UBERON:0001016,4.80e-18,75;UBERON:0004121,2.12e-17,95;UBERON:0000924,2.12e-17,95;UBERON:0006601,2.12e-17,95;UBERON:0003080,9.25e-17,40;UBERON:0002780,7.57e-16,39;UBERON:0001890,7.57e-16,39;UBERON:0006240,7.57e-16,39;UBERON:0010314,2.70e-14,92;UBERON:0003528,2.91e-14,29;UBERON:0002791,2.91e-14,29;UBERON:0001893,2.91e-14,29;UBERON:0002021,1.70e-12,10;UBERON:0000411,1.70e-12,10;UBERON:0001950,1.70e-12,10;UBERON:0002619,1.69e-11,17;UBERON:0000956,3.90e-11,21;UBERON:0001869,3.90e-11,21;UBERON:0000203,3.90e-11,21;UBERON:0003076,2.42e-08,12;UBERON:0003057,2.42e-08,12 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5424026158329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.809265843438391,1.05798195854407,0.633831403506179,0,0,0,0,0,0.599200221036809,0.384218305321555,1.14058573539325,0.270011876663381,0.630974884054146,3.99911378165325,4.19650227808066,1.5923803897944,0.766763768145891,1.83843757322004,20.9220173898839,36.2632040161933,25.9595041203051,1.31886287730194,0.823388792421687,0.52091337055676,17.588528937087,20.2594539611405,25.9757021220577,9.42811473515737,6.83384067835694,5.40558392893372,0.227178579999552,0.151143120213571,0.579728977403356,0,0,0,0,0,2.24711072210803,0,0,0,0.14084341977668,0,0,0,0,0,0,1.7127581957859,0,1.7813056687779,0.173485326766136,0,0.461230994512117,0.60289056221049,0.823120949949934,0.376999773989026,0,0,0,0.161766849947409,0,0,0,102.473278954042,94.6699114796817,0,0,0,0,37.5974504906105,29.2800385803921,4.77486538028885,86.5645114557537,77.2260681137598,45.2977937139841,43.8051410282946,0.203678727700633,0.248813941220186,1.51633655060205,6.10281382070775,0.390361328888111,1.60931473103431,0.720248519221397,1.80845781402858,2.04109497453984,3.07472928683639,2.71735001223214,23.5420067372504,0,0.378212160335639,1.05570674498369,0.219195732427575,1.39023624612799,1.74126083261083,0.411564272815887,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,69.395683026162,2.26390147234426,0,0,0,0.232236671860439,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0,0,0,0,0,0.114248512609729,0,0,0,0.210407459670956,0,0,0,0,0,0,0.196558995113203,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,3.32555742299888,0.189491411770485,0.162964976442026,0,0,0.502518772325447,0.714130922658041,0.195133647857799,0.472905432318573,0.8858587585951,0.797273843287435,1.3109065177259,0.863424909329478,1.59113964439663,0,0,0,0,25.6880943980467,22.6218555122952,0,0,0,0.390438744296638,0,0,0.445597348164788,0,0.404810701674894,0.292255857911312,0.395287777946524,15.4234231882467,0.567760340833074,0,0.325773918707152,0.164970122972535,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0.540183282093931,0.646793418913773,3.00071849044229,2.83744373827638,1.60531935841864,1.81003922662333,0,0,0,0,0.16488625294148,0.322928853391811,0.120625849856312,0,0,0,21.5093350332191,0,0.206386867963223,0,0,0,0,0,0,0,1.90934123603023,0.158167996790568,0.406638934253697,0.108005340821801,0.418176592028937,0.436725127492355,0.404593039154462,0.826534557253359,0.523511883968059,0,0,0,0,0.496375471371293,0.583353565032143,0.129159823477731,1.18269287843545,1.5256441023948,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0.19318959403219,1.50145980360946,3.6630324853453,4.50173596066038,0,108.432353782477,78.7156154427272,75.6222077740004,52.7589269795121,69.8784170166055,80.827147020698,71.5523850245714,77.4552469545659,77.487351936299,81.2883689450357,0,0.798049746802062,1.02440163452481,0.729320151204882,0.419226325255965,0.183843508450014,1.55572709461131,2.47242068686673,1.60459604795908,1.26348605881899,2.78827229879264,1.32038438970253,1.31098110457835,2.11283002936069,2.01024141344646,1.90517476513229,2.20180219295225,1.54327376370964,1.64834360321323,1.61918812147837,2.05721551431249,1.77475806159337,2.62279808942053,2.18019624948493,2.4468438907986,2.11536519729191,1.82927972872773,1.31534855718921,1.7654534799962,1.12228454331548,1.42362021749009,1.87158516513571,0.818462086339379,0.929621047115796,0.385813221962283,2.24829520144151,0.701794825336225,0.859484216193193,1.14772999241306,0.441182838239031,0.927471342481686 | |||
|short_description=p1@Kcnip4 | |||
}} |
Revision as of 07:43, 14 September 2013
Short description: | p1@Kcnip4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Kcnip4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -108bp_to_ENSMUST00000087395, ENSMUST00000101215_5end |
EntrezGene: | Kcnip4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.64e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.64e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.