FFCP PHASE1:Mm9::chr5:52862773..52862828,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100503884|HGNC=|MCL_coexpression_id=414|UniProt=|association_with_transcript=0bp_to_NM_001256059_5end|description=CAGE_peak_1_at_Ccdc149_5end|id=chr5:52862773..52862828,-|ontology_enrichment_celltype=CL:0000117!5.96e-10!23;CL:0000337!5.96e-10!23;CL:0000540!6.44e-08!33;CL:0000047!6.44e-08!33;CL:0000031!6.44e-08!33;CL:0000404!6.44e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,3.34e-10,23;CL:0000337,3.34e-10,23;CL:0000540,4.50e-08,33;CL:0000047,4.50e-08,33;CL:0000031,4.50e-08,33;CL:0000404,4.50e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.44e-20!63;UBERON:0001017!1.34e-19!73;UBERON:0005743!1.34e-19!73;UBERON:0001049!4.63e-19!52;UBERON:0005068!4.63e-19!52;UBERON:0006241!4.63e-19!52;UBERON:0007135!4.63e-19!52;UBERON:0000955!4.91e-19!50;UBERON:0006238!4.91e-19!50;UBERON:0000073!1.25e-18!75;UBERON:0001016!1.25e-18!75;UBERON:0002616!1.98e-18!49;UBERON:0004121!3.37e-17!102;UBERON:0000924!3.37e-17!102;UBERON:0006601!3.37e-17!102;UBERON:0004111!3.66e-16!122;UBERON:0002020!1.42e-15!34;UBERON:0003080!2.53e-15!40;UBERON:0002346!3.35e-15!71;UBERON:0003075!3.35e-15!71;UBERON:0007284!3.35e-15!71;UBERON:0003056!4.70e-15!49;UBERON:0002780!9.41e-15!39;UBERON:0001890!9.41e-15!39;UBERON:0006240!9.41e-15!39;UBERON:0002791!1.19e-13!29;UBERON:0003528!1.19e-13!29;UBERON:0001893!1.19e-13!29;UBERON:0000025!1.66e-13!114;UBERON:0000956!5.67e-10!21;UBERON:0001869!5.67e-10!21;UBERON:0000203!5.67e-10!21;UBERON:0002619!9.03e-09!17;UBERON:0000468!1.12e-08!333;UBERON:0000922!4.53e-07!328;UBERON:0002021!8.56e-07!10;UBERON:0000411!8.56e-07!10;UBERON:0001950!8.56e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.94e-21,54;UBERON:0001017,6.19e-20,73;UBERON:0001049,1.31e-19,52;UBERON:0005068,1.31e-19,52;UBERON:0006241,1.31e-19,52;UBERON:0007135,1.31e-19,52;UBERON:0004121,4.33e-19,95;UBERON:0000924,4.33e-19,95;UBERON:0006601,4.33e-19,95;UBERON:0001016,8.38e-19,75;UBERON:0002346,5.14e-18,64;UBERON:0003075,5.14e-18,64;UBERON:0007284,5.14e-18,64;UBERON:0010371,5.26e-18,73;UBERON:0000955,1.98e-17,47;UBERON:0006238,1.98e-17,47;UBERON:0002616,8.03e-17,46;UBERON:0002020,5.40e-16,34;UBERON:0003080,1.45e-15,40;UBERON:0003056,2.64e-15,49;UBERON:0004111,4.44e-15,122;UBERON:0002780,5.58e-15,39;UBERON:0001890,5.58e-15,39;UBERON:0006240,5.58e-15,39;UBERON:0010314,1.00e-14,92;UBERON:0003528,5.18e-14,29;UBERON:0002791,5.18e-14,29;UBERON:0001893,5.18e-14,29;UBERON:0000025,1.83e-12,114;UBERON:0000956,3.18e-10,21;UBERON:0001869,3.18e-10,21;UBERON:0000203,3.18e-10,21;UBERON:0002619,5.50e-09,17;UBERON:0002021,5.96e-07,10;UBERON:0000411,5.96e-07,10;UBERON:0001950,5.96e-07,10|phase1_expression=5.44506080156299,0.348975407639361,1.36499771816861,0,0,2.18243053485457,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14660173558958,0,0,0.319984845586813,0,1.14846392823004,0.430761996159075,0.646413698057667,0.190023419456374,1.00812051903972,1.10865255327652,0,0,0,2.88851619751275,0.498703936075477,3.26670970019791,0,0,0,0,0,0,1.6366586336825,2.12891555560981,0.734187008646726,0,2.61630187656536,3.51497892375155,4.08302788055995,2.37976916763116,1.43752564364972,0.167782606057736,0,0,1.54355661621568,1.14613375975503,1.54701627683233,4.24864567805155,3.70293685490423,5.70448263155561,0.338844532069132,0,0,0.988866362566974,0,0.599200221036809,2.30530983192933,3.83651565541367,3.51015439662396,4.41682418837902,4.57041575046086,3.75476519617743,4.16468717330844,3.35459148563827,5.51531271966013,17.6185409599022,20.8130361078856,21.9657342556428,4.48413378282659,4.94033275453012,4.16730696445408,20.1011759280994,10.6924895906019,14.6686317865738,7.95497180778903,6.40672563595963,7.82877672466262,0.530083353332288,1.51143120213571,6.08715426273523,5.16254326188832,0,1.61910957491345,0.649776417447669,0.448026887097336,1.40444420131752,0,0,0,6.90132756905734,0,0,0,2.38140145112336,1.01343946190039,1.51657333504435,2.05530983494308,0.517875767294343,3.26572705942614,0.867426633830679,1.21786191324856,0.230615497256059,1.05505848386836,1.76383060703557,1.88499886994513,0,2.16899035379867,0.884610551949874,1.94120219936891,2.65009822152472,1.45462575940567,7.45567044872489,7.31951992528868,12.5668024088073,2.04365644166873,0.11981512450592,0,0.381210681219194,12.1330417917906,10.980014467647,5.02617408451458,14.9488915365358,16.3657892691412,9.76603809429932,13.7905073607594,2.44414473240759,2.86136032403214,4.0435641349388,8.20723237957248,1.17108398666433,1.60931473103431,2.70093194708024,1.80845781402858,4.35433594568498,3.45907044769094,3.93547243150861,2.06962696591213,0,0.378212160335639,0.175951124163949,0.43839146485515,0.556094498451196,1.0447564995665,2.05782136407943,0.199034266818493,0,0.257347907114715,1.42081749697796,1.24275463521301,1.87620847984877,1.98068267607116,1.18372367792605,1.37734962223183,1.23413690309903,0.930135779001631,1.07309360559848,2.33530684734339,3.94943639792353,3.94001913789829,3.40489000092594,4.82459958503597,4.17145219052996,4.83143107537338,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| ||
|EntrezGene=100503884 | |||
|HGNC= | |||
|MCL_coexpression_id=414 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_NM_001256059_5end | |||
|description=CAGE_peak_1_at_Ccdc149_5end | |||
|id=chr5:52862773..52862828,- | |||
|ontology_enrichment_celltype=CL:0000117!5.96e-10!23;CL:0000337!5.96e-10!23;CL:0000540!6.44e-08!33;CL:0000047!6.44e-08!33;CL:0000031!6.44e-08!33;CL:0000404!6.44e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.34e-10,23;CL:0000337,3.34e-10,23;CL:0000540,4.50e-08,33;CL:0000047,4.50e-08,33;CL:0000031,4.50e-08,33;CL:0000404,4.50e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.44e-20!63;UBERON:0001017!1.34e-19!73;UBERON:0005743!1.34e-19!73;UBERON:0001049!4.63e-19!52;UBERON:0005068!4.63e-19!52;UBERON:0006241!4.63e-19!52;UBERON:0007135!4.63e-19!52;UBERON:0000955!4.91e-19!50;UBERON:0006238!4.91e-19!50;UBERON:0000073!1.25e-18!75;UBERON:0001016!1.25e-18!75;UBERON:0002616!1.98e-18!49;UBERON:0004121!3.37e-17!102;UBERON:0000924!3.37e-17!102;UBERON:0006601!3.37e-17!102;UBERON:0004111!3.66e-16!122;UBERON:0002020!1.42e-15!34;UBERON:0003080!2.53e-15!40;UBERON:0002346!3.35e-15!71;UBERON:0003075!3.35e-15!71;UBERON:0007284!3.35e-15!71;UBERON:0003056!4.70e-15!49;UBERON:0002780!9.41e-15!39;UBERON:0001890!9.41e-15!39;UBERON:0006240!9.41e-15!39;UBERON:0002791!1.19e-13!29;UBERON:0003528!1.19e-13!29;UBERON:0001893!1.19e-13!29;UBERON:0000025!1.66e-13!114;UBERON:0000956!5.67e-10!21;UBERON:0001869!5.67e-10!21;UBERON:0000203!5.67e-10!21;UBERON:0002619!9.03e-09!17;UBERON:0000468!1.12e-08!333;UBERON:0000922!4.53e-07!328;UBERON:0002021!8.56e-07!10;UBERON:0000411!8.56e-07!10;UBERON:0001950!8.56e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.94e-21,54;UBERON:0001017,6.19e-20,73;UBERON:0001049,1.31e-19,52;UBERON:0005068,1.31e-19,52;UBERON:0006241,1.31e-19,52;UBERON:0007135,1.31e-19,52;UBERON:0004121,4.33e-19,95;UBERON:0000924,4.33e-19,95;UBERON:0006601,4.33e-19,95;UBERON:0001016,8.38e-19,75;UBERON:0002346,5.14e-18,64;UBERON:0003075,5.14e-18,64;UBERON:0007284,5.14e-18,64;UBERON:0010371,5.26e-18,73;UBERON:0000955,1.98e-17,47;UBERON:0006238,1.98e-17,47;UBERON:0002616,8.03e-17,46;UBERON:0002020,5.40e-16,34;UBERON:0003080,1.45e-15,40;UBERON:0003056,2.64e-15,49;UBERON:0004111,4.44e-15,122;UBERON:0002780,5.58e-15,39;UBERON:0001890,5.58e-15,39;UBERON:0006240,5.58e-15,39;UBERON:0010314,1.00e-14,92;UBERON:0003528,5.18e-14,29;UBERON:0002791,5.18e-14,29;UBERON:0001893,5.18e-14,29;UBERON:0000025,1.83e-12,114;UBERON:0000956,3.18e-10,21;UBERON:0001869,3.18e-10,21;UBERON:0000203,3.18e-10,21;UBERON:0002619,5.50e-09,17;UBERON:0002021,5.96e-07,10;UBERON:0000411,5.96e-07,10;UBERON:0001950,5.96e-07,10 | |||
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| |||
|short_description=p1@Ccdc149 | |||
}} |
Revision as of 07:44, 14 September 2013
Short description: | p1@Ccdc149 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ccdc149_5end |
Coexpression cluster: | MCL_coexpression_mm9:414 |
Association with transcript: | 0bp_to_NM_001256059_5end |
EntrezGene: | Ccdc149 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.34e-10 | 23 |
neuroblast (sensu Vertebrata) | 3.34e-10 | 23 |
neuron | 4.50e-08 | 33 |
neuronal stem cell | 4.50e-08 | 33 |
neuroblast | 4.50e-08 | 33 |
electrically signaling cell | 4.50e-08 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.