FFCP PHASE1:Mm9::chr6:38304659..38304673,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:38304659..38304673,+|id=chr6:38304659..38304673,+|ontology_enrichment_celltype=CL:0000988!1.72e-13!32;CL:0002032!1.72e-13!32;CL:0000037!1.72e-13!32;CL:0000566!1.72e-13!32;CL:0000837!1.72e-13!32;CL:0002031!2.44e-10!25;CL:0000838!8.85e-10!12;CL:0000063!1.25e-09!66;CL:0000084!6.31e-09!11;CL:0000827!6.31e-09!11;CL:0002320!9.20e-09!46;CL:0000134!9.20e-09!46;CL:0000542!1.23e-08!13;CL:0000051!1.23e-08!13;CL:0000738!3.72e-08!17;CL:0002087!3.72e-08!17;CL:0000791!3.90e-08!9;CL:0000789!3.90e-08!9;CL:0002420!3.90e-08!9;CL:0002419!3.90e-08!9;CL:0000790!3.90e-08!9;CL:0000624!1.94e-07!8;CL:0000219!4.30e-07!54;CL:0002563!7.49e-07!9;CL:0002251!7.49e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,7.09e-25,32;CL:0002032,7.09e-25,32;CL:0000037,7.09e-25,32;CL:0000837,7.09e-25,32;CL:0002031,1.29e-18,25;CL:0002320,1.50e-17,46;CL:0000134,1.50e-17,46;CL:0000791,5.34e-15,9;CL:0000789,5.34e-15,9;CL:0002420,5.34e-15,9;CL:0002419,5.34e-15,9;CL:0000790,5.34e-15,9;CL:0000219,3.82e-14,54;CL:0000838,6.02e-14,12;CL:0000738,8.10e-14,17;CL:0002087,8.10e-14,17;CL:0000624,2.95e-13,8;CL:0000034,3.16e-13,97;CL:0000049,3.60e-13,19;CL:0000893,4.16e-13,6;CL:0002489,4.16e-13,6;CL:0000898,4.16e-13,6;CL:0000809,4.16e-13,6;CL:0000810,4.16e-13,6;CL:0000895,4.16e-13,6;CL:0000808,4.16e-13,6;CL:0000894,4.16e-13,6;CL:0000806,4.16e-13,6;CL:0000807,4.16e-13,6;CL:0000805,4.16e-13,6;CL:0002425,4.16e-13,6;CL:0002436,4.16e-13,6;CL:0002427,4.16e-13,6;CL:0002428,4.16e-13,6;CL:0002429,4.16e-13,6;CL:0002433,4.16e-13,6;CL:0002431,4.16e-13,6;CL:0002432,4.16e-13,6;CL:0000542,9.91e-13,13;CL:0000051,9.91e-13,13;CL:0000084,5.36e-12,11;CL:0000827,5.36e-12,11;CL:0000723,3.18e-11,91;CL:0000048,3.18e-11,91;CL:0000763,8.73e-09,16;CL:0000839,9.09e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0050686,2.92e-09,6;DOID:0060100,3.29e-08,3;DOID:4045,3.29e-08,3|ontology_enrichment_uberon=UBERON:0002193!9.01e-13!48;UBERON:0002390!1.56e-12!45;UBERON:0003061!1.56e-12!45;UBERON:0002405!7.17e-12!70;UBERON:0004177!1.75e-11!29;UBERON:0003929!2.50e-11!55;UBERON:0000490!1.24e-10!66;UBERON:0005057!1.16e-09!51;UBERON:0004923!1.91e-09!24;UBERON:0006562!5.90e-09!24;UBERON:0001557!5.90e-09!24;UBERON:0001042!5.90e-09!24;UBERON:0008814!5.90e-09!24;UBERON:0009145!5.90e-09!24;UBERON:0002370!9.06e-09!23;UBERON:0000974!9.06e-09!23;UBERON:0004807!9.06e-09!23;UBERON:0005058!9.06e-09!23;UBERON:0003351!9.06e-09!23;UBERON:0009113!9.06e-09!23;UBERON:0003295!9.06e-09!23;UBERON:0009722!9.06e-09!23;UBERON:0005562!9.06e-09!23;UBERON:0007690!9.06e-09!23;UBERON:0002384!9.20e-09!46;UBERON:0005911!2.28e-08!69;UBERON:0003408!4.18e-08!24;UBERON:0003081!3.17e-07!88;UBERON:0000072!3.76e-07!27;UBERON:0003350!7.49e-07!9;UBERON:0004808!7.49e-07!9;UBERON:0001277!7.49e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.50e-17,46;UBERON:0002193,9.44e-08,48;UBERON:0002405,9.44e-08,48;UBERON:0000490,1.58e-07,66;UBERON:0002390,2.95e-07,45;UBERON:0003061,2.95e-07,45|phase1_expression=0,2.79180326111489,0.454999239389536,2.41971369045464,3.00537437967808,0.671517087647559,0.467225281191051,7.87652272993615,2.81577444303333,1.87251621057595,2.39705155515707,2.07407613387875,6.50562773738582,6.29426897416781,0,0.809901069559304,0,1.73504190947031,2.33094537129756,2.12194825899015,0.0850432901510698,0.595745707205312,0.522399578277871,0.159992422793407,0,0,0,1.07735616342945,0,0.252030129759931,0.221730510655305,1.27006134691926,1.23012957516914,0,2.02196133825892,0.997407872150954,1.83752420636132,7.53356935326434,7.0320181007142,11.5175223674236,38.2350467220159,12.294818729252,6.311634589405,0,0.405507724878058,0,0,0,0,0,0,0,6.71130424230945,0.725362142011344,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0.453429360640713,2.6087803983151,0.860423876981386,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,3.6251303710604,0.445326417194474,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0.741584903203122,0.289198713839823,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,1.1981512450592,4.19931911695385,2.41433431438823,0,0,0,0,0,0,0,0.101839363850316,0.497627882440372,0.252722758433675,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0.702213187313235,1.54408744268829,2.27330799516474,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0.500535317148282,0.589676985339609,0.674586337154561,1.21716072833102,0.482354319504834,1.2731292589071,0,0.486405680325106,0,0,0,0,0,0,0,0.923765950833023,0,0,0.169745085775188,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,3.01582567878545,1.08781136763742,0,0,0,0.117211686592203,0,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0,0,0.1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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:38304659..38304673,+ | |||
|id=chr6:38304659..38304673,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.72e-13!32;CL:0002032!1.72e-13!32;CL:0000037!1.72e-13!32;CL:0000566!1.72e-13!32;CL:0000837!1.72e-13!32;CL:0002031!2.44e-10!25;CL:0000838!8.85e-10!12;CL:0000063!1.25e-09!66;CL:0000084!6.31e-09!11;CL:0000827!6.31e-09!11;CL:0002320!9.20e-09!46;CL:0000134!9.20e-09!46;CL:0000542!1.23e-08!13;CL:0000051!1.23e-08!13;CL:0000738!3.72e-08!17;CL:0002087!3.72e-08!17;CL:0000791!3.90e-08!9;CL:0000789!3.90e-08!9;CL:0002420!3.90e-08!9;CL:0002419!3.90e-08!9;CL:0000790!3.90e-08!9;CL:0000624!1.94e-07!8;CL:0000219!4.30e-07!54;CL:0002563!7.49e-07!9;CL:0002251!7.49e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.09e-25,32;CL:0002032,7.09e-25,32;CL:0000037,7.09e-25,32;CL:0000837,7.09e-25,32;CL:0002031,1.29e-18,25;CL:0002320,1.50e-17,46;CL:0000134,1.50e-17,46;CL:0000791,5.34e-15,9;CL:0000789,5.34e-15,9;CL:0002420,5.34e-15,9;CL:0002419,5.34e-15,9;CL:0000790,5.34e-15,9;CL:0000219,3.82e-14,54;CL:0000838,6.02e-14,12;CL:0000738,8.10e-14,17;CL:0002087,8.10e-14,17;CL:0000624,2.95e-13,8;CL:0000034,3.16e-13,97;CL:0000049,3.60e-13,19;CL:0000893,4.16e-13,6;CL:0002489,4.16e-13,6;CL:0000898,4.16e-13,6;CL:0000809,4.16e-13,6;CL:0000810,4.16e-13,6;CL:0000895,4.16e-13,6;CL:0000808,4.16e-13,6;CL:0000894,4.16e-13,6;CL:0000806,4.16e-13,6;CL:0000807,4.16e-13,6;CL:0000805,4.16e-13,6;CL:0002425,4.16e-13,6;CL:0002436,4.16e-13,6;CL:0002427,4.16e-13,6;CL:0002428,4.16e-13,6;CL:0002429,4.16e-13,6;CL:0002433,4.16e-13,6;CL:0002431,4.16e-13,6;CL:0002432,4.16e-13,6;CL:0000542,9.91e-13,13;CL:0000051,9.91e-13,13;CL:0000084,5.36e-12,11;CL:0000827,5.36e-12,11;CL:0000723,3.18e-11,91;CL:0000048,3.18e-11,91;CL:0000763,8.73e-09,16;CL:0000839,9.09e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,2.92e-09,6;DOID:0060100,3.29e-08,3;DOID:4045,3.29e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!9.01e-13!48;UBERON:0002390!1.56e-12!45;UBERON:0003061!1.56e-12!45;UBERON:0002405!7.17e-12!70;UBERON:0004177!1.75e-11!29;UBERON:0003929!2.50e-11!55;UBERON:0000490!1.24e-10!66;UBERON:0005057!1.16e-09!51;UBERON:0004923!1.91e-09!24;UBERON:0006562!5.90e-09!24;UBERON:0001557!5.90e-09!24;UBERON:0001042!5.90e-09!24;UBERON:0008814!5.90e-09!24;UBERON:0009145!5.90e-09!24;UBERON:0002370!9.06e-09!23;UBERON:0000974!9.06e-09!23;UBERON:0004807!9.06e-09!23;UBERON:0005058!9.06e-09!23;UBERON:0003351!9.06e-09!23;UBERON:0009113!9.06e-09!23;UBERON:0003295!9.06e-09!23;UBERON:0009722!9.06e-09!23;UBERON:0005562!9.06e-09!23;UBERON:0007690!9.06e-09!23;UBERON:0002384!9.20e-09!46;UBERON:0005911!2.28e-08!69;UBERON:0003408!4.18e-08!24;UBERON:0003081!3.17e-07!88;UBERON:0000072!3.76e-07!27;UBERON:0003350!7.49e-07!9;UBERON:0004808!7.49e-07!9;UBERON:0001277!7.49e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.50e-17,46;UBERON:0002193,9.44e-08,48;UBERON:0002405,9.44e-08,48;UBERON:0000490,1.58e-07,66;UBERON:0002390,2.95e-07,45;UBERON:0003061,2.95e-07,45 | |||
|phase1_expression=0,2.79180326111489,0.454999239389536,2.41971369045464,3.00537437967808,0.671517087647559,0.467225281191051,7.87652272993615,2.81577444303333,1.87251621057595,2.39705155515707,2.07407613387875,6.50562773738582,6.29426897416781,0,0.809901069559304,0,1.73504190947031,2.33094537129756,2.12194825899015,0.0850432901510698,0.595745707205312,0.522399578277871,0.159992422793407,0,0,0,1.07735616342945,0,0.252030129759931,0.221730510655305,1.27006134691926,1.23012957516914,0,2.02196133825892,0.997407872150954,1.83752420636132,7.53356935326434,7.0320181007142,11.5175223674236,38.2350467220159,12.294818729252,6.311634589405,0,0.405507724878058,0,0,0,0,0,0,0,6.71130424230945,0.725362142011344,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0.453429360640713,2.6087803983151,0.860423876981386,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,3.6251303710604,0.445326417194474,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0,0.741584903203122,0.289198713839823,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0,0.255457055208591,1.1981512450592,4.19931911695385,2.41433431438823,0,0,0,0,0,0,0,0.101839363850316,0.497627882440372,0.252722758433675,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0.702213187313235,1.54408744268829,2.27330799516474,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0.500535317148282,0.589676985339609,0.674586337154561,1.21716072833102,0.482354319504834,1.2731292589071,0,0.486405680325106,0,0,0,0,0,0,0,0.923765950833023,0,0,0.169745085775188,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,3.01582567878545,1.08781136763742,0,0,0,0.117211686592203,0,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0.316036757935816,0,0,1.02131881726136,0,0,0,0,0,0,0,0.23467170806371,0.42366414172764,0,0.32977250588296,0,0.180938774784468,0,0.164140899745061,0,0,0.854354403989263,0.412773735926445,0.555583582109135,0.753473828018764,0.410082683163076,0.915112692826091,1.01987057996313,1.95932033253121,1.52019971184866,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0.258319646955462,0.168956125490778,0.234714477291508,0.2604087696879,0,0,0,0.316011120628178,0.405450430580328,0.308132871494482,0.129920822977795,0.716106782669926,0.993406773906324,0.360586348559907,0.738447635872886,0.504832249740738,0.381034033274999,0.403304740547362,0.779663045918019,1.53938946624527,1.5193997283604,0.226730383615211,0.221985953374065,0.358855426437903,0.167884616364078,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.729320151204882,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.229741875822453,0.476293691283074,0,0,0.412085900803307,0.147198920134397,0,0.354951612318675,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0.441182838239031,0 | |||
|short_description=p@chr6:38304659..38304673,+ | |||
}} |
Revision as of 09:45, 14 September 2013
Short description: | p@chr6:38304659..38304673, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:38304659..38304673, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.50e-17 | 46 |
hemolymphoid system | 9.44e-08 | 48 |
immune system | 9.44e-08 | 48 |
unilaminar epithelium | 1.58e-07 | 66 |
hematopoietic system | 2.95e-07 | 45 |
blood island | 2.95e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 2.92e-09 | 6 |
musculoskeletal system cancer | 3.29e-08 | 3 |
muscle cancer | 3.29e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.