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FFCP PHASE1:Mm9::chr6:86145075..86145086,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=21802|HGNC=|UniProt=P48030,Q545E4|association_with_transcript=-158bp_to_NM_031199,uc009crj.2,uc009crk.2_5end|description=CAGE_peak_8_at_Tgfa_5end|id=chr6:86145075..86145086,+|ontology_enrichment_celltype=CL:0000117!2.23e-09!23;CL:0000337!2.23e-09!23|ontology_enrichment_celltype_v019_2=CL:0002612,1.55e-22,3;CL:0000117,2.50e-11,23;CL:0000337,2.50e-11,23;CL:0000540,8.11e-08,33;CL:0000047,8.11e-08,33;CL:0000031,8.11e-08,33;CL:0000404,8.11e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.22e-12!52;UBERON:0005068!6.22e-12!52;UBERON:0006241!6.22e-12!52;UBERON:0007135!6.22e-12!52;UBERON:0002346!2.51e-10!71;UBERON:0003075!2.51e-10!71;UBERON:0007284!2.51e-10!71;UBERON:0000033!6.74e-10!63;UBERON:0000955!2.73e-09!50;UBERON:0006238!2.73e-09!50;UBERON:0002616!8.88e-09!49;UBERON:0004121!2.96e-08!102;UBERON:0000924!2.96e-08!102;UBERON:0006601!2.96e-08!102;UBERON:0000073!3.05e-08!75;UBERON:0001016!3.05e-08!75;UBERON:0001017!3.65e-08!73;UBERON:0005743!3.65e-08!73;UBERON:0003056!4.36e-08!49;UBERON:0003080!7.95e-08!40;UBERON:0002020!1.05e-07!34;UBERON:0002780!1.47e-07!39;UBERON:0001890!1.47e-07!39;UBERON:0006240!1.47e-07!39;UBERON:0002420!6.51e-07!8;UBERON:0007245!6.51e-07!8;UBERON:0010009!6.51e-07!8;UBERON:0010011!6.51e-07!8;UBERON:0000454!6.51e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002240,3.50e-30,6;UBERON:0005174,3.50e-30,6;UBERON:0001137,3.50e-30,6;UBERON:0001948,9.62e-24,5;UBERON:0002315,9.62e-24,5;UBERON:0002257,1.55e-22,3;UBERON:0003076,3.64e-15,12;UBERON:0003057,3.64e-15,12;UBERON:0000369,3.78e-14,5;UBERON:0002435,3.78e-14,5;UBERON:0000204,3.78e-14,5;UBERON:0010082,3.78e-14,5;UBERON:0002020,2.14e-13,34;UBERON:0001049,9.30e-11,52;UBERON:0005068,9.30e-11,52;UBERON:0006241,9.30e-11,52;UBERON:0007135,9.30e-11,52;UBERON:0002420,4.63e-09,8;UBERON:0007245,4.63e-09,8;UBERON:0010009,4.63e-09,8;UBERON:0010011,4.63e-09,8;UBERON:0000454,4.63e-09,8;UBERON:0001153,6.23e-09,1;UBERON:0001045,6.23e-09,1;UBERON:0000489,1.12e-08,21;UBERON:0002346,1.37e-08,64;UBERON:0003075,1.37e-08,64;UBERON:0007284,1.37e-08,64;UBERON:0000073,3.39e-08,54;UBERON:0010371,2.01e-07,73;UBERON:0001017,2.01e-07,73;UBERON:0001016,3.34e-07,75|phase1_expression=0.320297694209588,0,0,1.20985684522732,0.500895729946347,0.16787927191189,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,0.57423196411502,0.86152399231815,0.430942465371778,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,0,0,0.388859798148567,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,1.71390590642282,0.441737081903227,0.734944795289724,0.479227355091182,1.83843757322004,0,0.510749352340751,0.46081959976873,0.923204014111357,1.55528994124096,0.52091337055676,0.558365998002762,0.56276261003168,0.763991238884051,1.47314292736834,1.13897344639282,2.05039390407831,0.075726193333184,0.151143120213571,0.289864488701678,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0.865964164044856,0,0,0,0,0.29688427812965,0,0.304465478312141,0,0.150722640552623,0.23517741427141,0,0.741584903203122,0,0,0,0,0,1.86391761218122,0.292780797011547,0.628340120440365,0.510914110417183,0,0,0,0.299581278809645,1.83000241127451,4.77486538028885,0.347648640384553,0.767146371990992,0.41557608911912,0.973447578406546,0,0,0,0.210441855886474,0,0,0,0.452114453507145,0.272145996605311,0.512454881139399,0.281105173679186,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0,0,0,0.350296027101508,0.16455984991348,0,0,0,0.219550115291051,0.134206418760372,0.210289948564127,0.92614151141356,0.330418782983798,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0.494096864172033,0.502670417600539,0.397912944082302,0,0,0.432276099749388,0,0,0.342745537829186,0,0.610953983535943,0.193952487167626,0.280543279561274,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0.509235257325564,0,0,0.238043640886014,0,0,0,0,0,0.518054945597687,0,0,0,0,0,0.321101179975584,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0.567760340833074,0.178065603667255,0.488660878060728,0.164970122972535,0,0,0,0,0,0,0.516856586336442,0.727067458955011,0.356497378384721,0.632073515871632,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.857348140126369,0.354680467284547,0.535106452806212,0.329098041204242,0,0.469343416127421,0.21183207086382,0,0,0.161464426695906,0.120625849856312,0,0.164140899745061,0.291480836629851,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0.209088296014469,0,0.269728692769641,0.247960367176008,0,0.518459893167171,0,0.56369293868419,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0.58678619322877,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0.0897138566094757,0,0.19318959403219,0.375364950902364,0,0.214368379079066,0.501572104035363,0,0,0,0.171853182343688,0.685082519770642,0,0.675022500231806,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0.367687016900028,0.222246727801615,0.618105171716683,0.64183841918363,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.320125762024346,0.574354689556133,0,0,0.578727661391115,0.412085900803307,0.147198920134397,0.685738504770831,0.70990322463735,0.238436189947321,0,0.376437521661322,0.423073039458382,0,0.263069711437843,0.407412341537585,0.561142271657738,0.118635018124174,0.0985044823755635,0,0,0,0.499621155875892,0.233931608445408,0.214871054048298,0.191288332068843,0,0|short_description=p8@Tgfa}}
|EntrezGene=21802
|HGNC=
|UniProt=P48030,Q545E4
|association_with_transcript=-158bp_to_NM_031199,uc009crj.2,uc009crk.2_5end
|description=CAGE_peak_8_at_Tgfa_5end
|id=chr6:86145075..86145086,+
|ontology_enrichment_celltype=CL:0000117!2.23e-09!23;CL:0000337!2.23e-09!23
|ontology_enrichment_celltype_v019_2=CL:0002612,1.55e-22,3;CL:0000117,2.50e-11,23;CL:0000337,2.50e-11,23;CL:0000540,8.11e-08,33;CL:0000047,8.11e-08,33;CL:0000031,8.11e-08,33;CL:0000404,8.11e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!6.22e-12!52;UBERON:0005068!6.22e-12!52;UBERON:0006241!6.22e-12!52;UBERON:0007135!6.22e-12!52;UBERON:0002346!2.51e-10!71;UBERON:0003075!2.51e-10!71;UBERON:0007284!2.51e-10!71;UBERON:0000033!6.74e-10!63;UBERON:0000955!2.73e-09!50;UBERON:0006238!2.73e-09!50;UBERON:0002616!8.88e-09!49;UBERON:0004121!2.96e-08!102;UBERON:0000924!2.96e-08!102;UBERON:0006601!2.96e-08!102;UBERON:0000073!3.05e-08!75;UBERON:0001016!3.05e-08!75;UBERON:0001017!3.65e-08!73;UBERON:0005743!3.65e-08!73;UBERON:0003056!4.36e-08!49;UBERON:0003080!7.95e-08!40;UBERON:0002020!1.05e-07!34;UBERON:0002780!1.47e-07!39;UBERON:0001890!1.47e-07!39;UBERON:0006240!1.47e-07!39;UBERON:0002420!6.51e-07!8;UBERON:0007245!6.51e-07!8;UBERON:0010009!6.51e-07!8;UBERON:0010011!6.51e-07!8;UBERON:0000454!6.51e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0002240,3.50e-30,6;UBERON:0005174,3.50e-30,6;UBERON:0001137,3.50e-30,6;UBERON:0001948,9.62e-24,5;UBERON:0002315,9.62e-24,5;UBERON:0002257,1.55e-22,3;UBERON:0003076,3.64e-15,12;UBERON:0003057,3.64e-15,12;UBERON:0000369,3.78e-14,5;UBERON:0002435,3.78e-14,5;UBERON:0000204,3.78e-14,5;UBERON:0010082,3.78e-14,5;UBERON:0002020,2.14e-13,34;UBERON:0001049,9.30e-11,52;UBERON:0005068,9.30e-11,52;UBERON:0006241,9.30e-11,52;UBERON:0007135,9.30e-11,52;UBERON:0002420,4.63e-09,8;UBERON:0007245,4.63e-09,8;UBERON:0010009,4.63e-09,8;UBERON:0010011,4.63e-09,8;UBERON:0000454,4.63e-09,8;UBERON:0001153,6.23e-09,1;UBERON:0001045,6.23e-09,1;UBERON:0000489,1.12e-08,21;UBERON:0002346,1.37e-08,64;UBERON:0003075,1.37e-08,64;UBERON:0007284,1.37e-08,64;UBERON:0000073,3.39e-08,54;UBERON:0010371,2.01e-07,73;UBERON:0001017,2.01e-07,73;UBERON:0001016,3.34e-07,75
|phase1_expression=0.320297694209588,0,0,1.20985684522732,0.500895729946347,0.16787927191189,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,0.57423196411502,0.86152399231815,0.430942465371778,0.190023419456374,0.252030129759931,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0,0,0,0.388859798148567,0,0,0,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,1.71390590642282,0.441737081903227,0.734944795289724,0.479227355091182,1.83843757322004,0,0.510749352340751,0.46081959976873,0.923204014111357,1.55528994124096,0.52091337055676,0.558365998002762,0.56276261003168,0.763991238884051,1.47314292736834,1.13897344639282,2.05039390407831,0.075726193333184,0.151143120213571,0.289864488701678,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0.865964164044856,0,0,0,0,0.29688427812965,0,0.304465478312141,0,0.150722640552623,0.23517741427141,0,0.741584903203122,0,0,0,0,0,1.86391761218122,0.292780797011547,0.628340120440365,0.510914110417183,0,0,0,0.299581278809645,1.83000241127451,4.77486538028885,0.347648640384553,0.767146371990992,0.41557608911912,0.973447578406546,0,0,0,0.210441855886474,0,0,0,0.452114453507145,0.272145996605311,0.512454881139399,0.281105173679186,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0,0,0,0.350296027101508,0.16455984991348,0,0,0,0.219550115291051,0.134206418760372,0.210289948564127,0.92614151141356,0.330418782983798,0,0,0.232236671860439,0,0,0,0.190225626112559,0,0.494096864172033,0.502670417600539,0.397912944082302,0,0,0.432276099749388,0,0,0.342745537829186,0,0.610953983535943,0.193952487167626,0.280543279561274,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0.274561413188081,1.43768206527355,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0.509235257325564,0,0,0.238043640886014,0,0,0,0,0,0.518054945597687,0,0,0,0,0,0.321101179975584,0.586058432961016,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0.567760340833074,0.178065603667255,0.488660878060728,0.164970122972535,0,0,0,0,0,0,0.516856586336442,0.727067458955011,0.356497378384721,0.632073515871632,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.857348140126369,0.354680467284547,0.535106452806212,0.329098041204242,0,0.469343416127421,0.21183207086382,0,0,0.161464426695906,0.120625849856312,0,0.164140899745061,0.291480836629851,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0.209088296014469,0,0.269728692769641,0.247960367176008,0,0.518459893167171,0,0.56369293868419,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0.58678619322877,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0.0897138566094757,0,0.19318959403219,0.375364950902364,0,0.214368379079066,0.501572104035363,0,0,0,0.171853182343688,0.685082519770642,0,0.675022500231806,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0.367687016900028,0.222246727801615,0.618105171716683,0.64183841918363,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.320125762024346,0.574354689556133,0,0,0.578727661391115,0.412085900803307,0.147198920134397,0.685738504770831,0.70990322463735,0.238436189947321,0,0.376437521661322,0.423073039458382,0,0.263069711437843,0.407412341537585,0.561142271657738,0.118635018124174,0.0985044823755635,0,0,0,0.499621155875892,0.233931608445408,0.214871054048298,0.191288332068843,0,0
|short_description=p8@Tgfa
}}

Revision as of 10:49, 14 September 2013

Short description:p8@Tgfa
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Tgfa_5end
Coexpression cluster:NA
Association with transcript: -158bp_to_NM_031199, uc009crj.2, uc009crk.2_5end
EntrezGene:Tgfa
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p8@Tgfa

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F14.77
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron of the ventral spinal cord1.55e-223
CNS neuron (sensu Vertebrata)2.50e-1123
neuroblast (sensu Vertebrata)2.50e-1123
neuron8.11e-0833
neuronal stem cell8.11e-0833
neuroblast8.11e-0833
electrically signaling cell8.11e-0833

Uber anatomy
Ontology termp-valuen
spinal cord3.50e-306
dorsal region element3.50e-306
dorsum3.50e-306
regional part of spinal cord9.62e-245
gray matter of spinal cord9.62e-245
ventral horn of spinal cord1.55e-223
posterior neural tube3.64e-1512
chordal neural plate3.64e-1512
corpus striatum3.78e-145
striatum3.78e-145
ventral part of telencephalon3.78e-145
future corpus striatum3.78e-145
gray matter2.14e-1334
neural tube9.30e-1152
neural rod9.30e-1152
future spinal cord9.30e-1152
neural keel9.30e-1152
basal ganglion4.63e-098
nuclear complex of neuraxis4.63e-098
aggregate regional part of brain4.63e-098
collection of basal ganglia4.63e-098
cerebral subcortex4.63e-098
caecum6.23e-091
midgut6.23e-091
cavitated compound organ1.12e-0821
neurectoderm1.37e-0864
neural plate1.37e-0864
presumptive neural plate1.37e-0864
regional part of nervous system3.39e-0854
ecto-epithelium2.01e-0773
central nervous system2.01e-0773
nervous system3.34e-0775







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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