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FFCP PHASE1:Mm9::chr6:97567530..97567591,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=232288|HGNC=|UniProt=Q920B0|association_with_transcript=0bp_to_ENSMUST00000113355_5end|description=CAGE_peak_1_at_Frmd4b_5end|id=chr6:97567530..97567591,-|ontology_enrichment_celltype=CL:0000540!6.49e-09!33;CL:0000047!6.49e-09!33;CL:0000031!6.49e-09!33;CL:0000404!6.49e-09!33;CL:0000117!2.06e-07!23;CL:0000337!2.06e-07!23;CL:0000393!6.33e-07!39;CL:0000211!6.33e-07!39|ontology_enrichment_celltype_v019_2=CL:0000540,3.79e-09,33;CL:0000047,3.79e-09,33;CL:0000031,3.79e-09,33;CL:0000404,3.79e-09,33;CL:0000117,1.34e-07,23;CL:0000337,1.34e-07,23;CL:0000393,2.25e-07,39;CL:0000211,2.25e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!3.41e-12!333;UBERON:0000922!6.52e-10!328;UBERON:0005157!9.82e-08!27;UBERON:0002048!7.22e-07!14;UBERON:0000117!7.22e-07!14;UBERON:0000171!7.22e-07!14;UBERON:0000170!7.22e-07!14;UBERON:0005597!7.22e-07!14;UBERON:0000118!7.22e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0000922,1.17e-07,320;UBERON:0002048,4.89e-07,14;UBERON:0000117,4.89e-07,14;UBERON:0000171,4.89e-07,14;UBERON:0000170,4.89e-07,14;UBERON:0005597,4.89e-07,14;UBERON:0000118,4.89e-07,14|phase1_expression=4.64431656603902,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,1.66554880907831,0.607425802169478,0,0,0.137114433605739,0,5.01755411891312,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,2.09979632438044,0,0.167782606057736,0,0,3.60163210450326,4.29800159908135,7.73508138416164,11.5320382689971,14.2827564403449,8.23980824558033,0.338844532069132,0,0,0,0,0.299600110518405,0.384218305321555,38.7799150033706,47.6570962310868,35.7552434297349,3.71346279724945,4.41737081903227,20.9459266657571,21.7569219211397,20.2228133054205,4.40463523997555,3.83062014255563,3.22573719838111,13.9799464994005,11.2529801630964,14.0646610050325,2.51264699101243,3.93933827022176,3.36156145108982,4.41942878210502,7.54569908235246,18.2671456908795,0.605809546665472,0.226714680320357,5.50742528533188,1.72084775396277,0,0,0,0,1.40444420131752,0,0,0,2.39433813620357,0,0,0,0.432982082022428,0.760079596425296,0,1.37020655662872,0.517875767294343,12.7660239595749,10.0621489524359,6.08930956624282,5.5347719341454,5.72746034099966,9.05433044944927,4.39833069653864,1.73036477414062,2.16899035379867,0,5.98537344805414,2.65009822152472,5.81850303762267,1.86391761218122,1.46390398505774,1.04723353406728,0.766371165625774,0,0,0,4.04434726393021,6.8625090422794,8.04187853522332,2.25971616249959,1.79000820131231,2.49345653471472,4.38051410282946,11.4060087512354,4.97627882440372,0.252722758433675,1.26265113531884,4.03373373184381,3.90833577536904,5.94205028357652,9.19299388797862,9.32100038373192,10.8896662242122,8.99536555773397,4.13925393182425,6.46703978798527,5.67318240503458,5.98233822157426,2.6303487891309,10.0097009721215,8.70630416305416,5.35033554660653,23.0879749509452,0,0,0.284163499395593,2.69263504296152,4.22146907965973,2.88099298337624,3.55117103377815,1.96764231747404,2.77680803197281,3.0229412817553,2.14618721119695,3.61972561338225,2.30383789878873,3.61168420974009,3.81023404865522,4.38599962275997,4.39100230582101,3.08674763148855,8.83217783969334,30.6655744890268,0,0.528901133327089,3.41261200856374,4.87697010906921,2.70621668776396,2.42020229548011,1.77902435075896,0.951128130562796,2.37264530772256,1.31759163779209,2.26201687920243,2.18852119245266,3.31438948102504,5.39291645192533,3.8904848977445,1.99141273254367,2.65535061334314,5.25543158004753,4.50830942692322,4.48032921259691,3.29719228184964,4.9095073923223,6.13394410105296,3.24742325555125,3.767969468193,2.83813477020141,0.296452627087149,0.667380422864376,0.982794975566015,0.224862112384854,0.405720242777006,0.72353147925725,0.25462585178142,0.863088412352432,0.324270453550071,0.549122826376163,4.31304619582064,1.11642284300551,0.312037673114561,0.252578877947112,0.358794827043824,0,17.3667998756608,4.35830247072115,6.51859905768104,6.11082308790677,5.39787571063555,8.87783164441623,7.14130922658041,13.2690880543303,19.8620281573801,21.4820748959312,22.6425771493632,29.9869865929801,25.7300622980184,23.1438493730419,0,0,1.96705709207614,2.20749397043786,4.17431533968259,5.04010252346474,0,4.54447668967871,5.99465616890888,7.41833614163613,9.69405289797595,2.86762557543062,4.01037613348309,4.52922449262132,6.07216052512342,8.47541987942804,14.2303600060748,8.03303291054518,6.52924391958036,6.05423052468668,13.3567306669932,21.6110861094021,0,4.12727081463468,2.11626489875326,2.26326095707078,1.77181135728464,2.15204603560749,3.35956781118687,3.99887102425256,1.78248689192361,2.52829406348653,0,5.15677716240934,0.340439605753788,6.12207719706455,3.36332577835162,3.64372959553707,3.01478397191865,3.21063871683727,3.78462747384878,1.8267896946876,10.7948985709307,8.26145076368899,1.54369878638473,15.4993077764991,7.42736362801165,8.44380948994182,7.5204576721976,10.3408766839389,3.20628920292836,4.45020724825223,1.87957968877638,1.857481811669,2.22233432843654,1.88368457004691,1.77702496037333,1.60144721244566,0,0,0,0.954670618015114,2.21435195506795,2.64315307264903,3.13215488383224,2.29997125615916,2.83871332870031,3.2367443132357,2.97552440611209,3.14107130380836,2.20345454596048,0.621339313086926,0,22.2779653605528,13.8985131983962,11.2781689239548,7.36210993823067,7.7719817725758,7.27614879603675,5.07797100891405,1.36317147753424,0.483168241652012,0.864090018773596,0.948033361884535,5.47358081283443,1.74608627180206,1.03936658382236,0.895133478337407,1.19208812868759,0.480781798079875,0.443068581523732,0.605798699688886,0.762068066549998,0.201652370273681,0.38983152295901,0.0962118416403295,1.28564592399726,2.0405734525369,0.665957860122194,0.179427713218951,1.34307693091263,3.28422309854724,6.94425159169373,20.696133542201,8.57473516316263,2.50786052017682,2.25900737046827,0.460325236507177,0.572895513439397,0.68741272937475,0,3.0215755895588,0,0.900642406448441,0.906284817968409,2.07104124700728,12.9734184480221,15.5619700626402,8.53668028770671,6.32077464377565,9.22297915563122,5.88299227040045,6.88964856185007,12.5681384915725,11.5530915453053,10.1078884705519,10.1391719956096,11.5062068245506,10.0196412992774,10.8202507564229,9.70659425349864,12.3836359733599,10.7772423128716,9.64546102318525,10.714233420886,13.9838974127677,7.20025430009372,7.98641127717019,12.1602456873134,11.482366913954,12.0460006931623,10.9998990259179,10.7927503994936,12.3642764375786,7.74083448921412,8.97827634652382,10.3212465768031,10.9339975436875,12.2769312950907,10.2258315182738,8.68079749415136,11.4912865851455,6.78401664491684,9.02458427002853,3.63447830930802,2.8676884485537,5.56482805489012|short_description=p1@Frmd4b}}
|EntrezGene=232288
|HGNC=
|UniProt=Q920B0
|association_with_transcript=0bp_to_ENSMUST00000113355_5end
|description=CAGE_peak_1_at_Frmd4b_5end
|id=chr6:97567530..97567591,-
|ontology_enrichment_celltype=CL:0000540!6.49e-09!33;CL:0000047!6.49e-09!33;CL:0000031!6.49e-09!33;CL:0000404!6.49e-09!33;CL:0000117!2.06e-07!23;CL:0000337!2.06e-07!23;CL:0000393!6.33e-07!39;CL:0000211!6.33e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000540,3.79e-09,33;CL:0000047,3.79e-09,33;CL:0000031,3.79e-09,33;CL:0000404,3.79e-09,33;CL:0000117,1.34e-07,23;CL:0000337,1.34e-07,23;CL:0000393,2.25e-07,39;CL:0000211,2.25e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!3.41e-12!333;UBERON:0000922!6.52e-10!328;UBERON:0005157!9.82e-08!27;UBERON:0002048!7.22e-07!14;UBERON:0000117!7.22e-07!14;UBERON:0000171!7.22e-07!14;UBERON:0000170!7.22e-07!14;UBERON:0005597!7.22e-07!14;UBERON:0000118!7.22e-07!14
|ontology_enrichment_uberon_v019_2=UBERON:0000922,1.17e-07,320;UBERON:0002048,4.89e-07,14;UBERON:0000117,4.89e-07,14;UBERON:0000171,4.89e-07,14;UBERON:0000170,4.89e-07,14;UBERON:0005597,4.89e-07,14;UBERON:0000118,4.89e-07,14
|phase1_expression=4.64431656603902,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,1.66554880907831,0.607425802169478,0,0,0.137114433605739,0,5.01755411891312,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0.194429899074283,2.09979632438044,0,0.167782606057736,0,0,3.60163210450326,4.29800159908135,7.73508138416164,11.5320382689971,14.2827564403449,8.23980824558033,0.338844532069132,0,0,0,0,0.299600110518405,0.384218305321555,38.7799150033706,47.6570962310868,35.7552434297349,3.71346279724945,4.41737081903227,20.9459266657571,21.7569219211397,20.2228133054205,4.40463523997555,3.83062014255563,3.22573719838111,13.9799464994005,11.2529801630964,14.0646610050325,2.51264699101243,3.93933827022176,3.36156145108982,4.41942878210502,7.54569908235246,18.2671456908795,0.605809546665472,0.226714680320357,5.50742528533188,1.72084775396277,0,0,0,0,1.40444420131752,0,0,0,2.39433813620357,0,0,0,0.432982082022428,0.760079596425296,0,1.37020655662872,0.517875767294343,12.7660239595749,10.0621489524359,6.08930956624282,5.5347719341454,5.72746034099966,9.05433044944927,4.39833069653864,1.73036477414062,2.16899035379867,0,5.98537344805414,2.65009822152472,5.81850303762267,1.86391761218122,1.46390398505774,1.04723353406728,0.766371165625774,0,0,0,4.04434726393021,6.8625090422794,8.04187853522332,2.25971616249959,1.79000820131231,2.49345653471472,4.38051410282946,11.4060087512354,4.97627882440372,0.252722758433675,1.26265113531884,4.03373373184381,3.90833577536904,5.94205028357652,9.19299388797862,9.32100038373192,10.8896662242122,8.99536555773397,4.13925393182425,6.46703978798527,5.67318240503458,5.98233822157426,2.6303487891309,10.0097009721215,8.70630416305416,5.35033554660653,23.0879749509452,0,0,0.284163499395593,2.69263504296152,4.22146907965973,2.88099298337624,3.55117103377815,1.96764231747404,2.77680803197281,3.0229412817553,2.14618721119695,3.61972561338225,2.30383789878873,3.61168420974009,3.81023404865522,4.38599962275997,4.39100230582101,3.08674763148855,8.83217783969334,30.6655744890268,0,0.528901133327089,3.41261200856374,4.87697010906921,2.70621668776396,2.42020229548011,1.77902435075896,0.951128130562796,2.37264530772256,1.31759163779209,2.26201687920243,2.18852119245266,3.31438948102504,5.39291645192533,3.8904848977445,1.99141273254367,2.65535061334314,5.25543158004753,4.50830942692322,4.48032921259691,3.29719228184964,4.9095073923223,6.13394410105296,3.24742325555125,3.767969468193,2.83813477020141,0.296452627087149,0.667380422864376,0.982794975566015,0.224862112384854,0.405720242777006,0.72353147925725,0.25462585178142,0.863088412352432,0.324270453550071,0.549122826376163,4.31304619582064,1.11642284300551,0.312037673114561,0.252578877947112,0.358794827043824,0,17.3667998756608,4.35830247072115,6.51859905768104,6.11082308790677,5.39787571063555,8.87783164441623,7.14130922658041,13.2690880543303,19.8620281573801,21.4820748959312,22.6425771493632,29.9869865929801,25.7300622980184,23.1438493730419,0,0,1.96705709207614,2.20749397043786,4.17431533968259,5.04010252346474,0,4.54447668967871,5.99465616890888,7.41833614163613,9.69405289797595,2.86762557543062,4.01037613348309,4.52922449262132,6.07216052512342,8.47541987942804,14.2303600060748,8.03303291054518,6.52924391958036,6.05423052468668,13.3567306669932,21.6110861094021,0,4.12727081463468,2.11626489875326,2.26326095707078,1.77181135728464,2.15204603560749,3.35956781118687,3.99887102425256,1.78248689192361,2.52829406348653,0,5.15677716240934,0.340439605753788,6.12207719706455,3.36332577835162,3.64372959553707,3.01478397191865,3.21063871683727,3.78462747384878,1.8267896946876,10.7948985709307,8.26145076368899,1.54369878638473,15.4993077764991,7.42736362801165,8.44380948994182,7.5204576721976,10.3408766839389,3.20628920292836,4.45020724825223,1.87957968877638,1.857481811669,2.22233432843654,1.88368457004691,1.77702496037333,1.60144721244566,0,0,0,0.954670618015114,2.21435195506795,2.64315307264903,3.13215488383224,2.29997125615916,2.83871332870031,3.2367443132357,2.97552440611209,3.14107130380836,2.20345454596048,0.621339313086926,0,22.2779653605528,13.8985131983962,11.2781689239548,7.36210993823067,7.7719817725758,7.27614879603675,5.07797100891405,1.36317147753424,0.483168241652012,0.864090018773596,0.948033361884535,5.47358081283443,1.74608627180206,1.03936658382236,0.895133478337407,1.19208812868759,0.480781798079875,0.443068581523732,0.605798699688886,0.762068066549998,0.201652370273681,0.38983152295901,0.0962118416403295,1.28564592399726,2.0405734525369,0.665957860122194,0.179427713218951,1.34307693091263,3.28422309854724,6.94425159169373,20.696133542201,8.57473516316263,2.50786052017682,2.25900737046827,0.460325236507177,0.572895513439397,0.68741272937475,0,3.0215755895588,0,0.900642406448441,0.906284817968409,2.07104124700728,12.9734184480221,15.5619700626402,8.53668028770671,6.32077464377565,9.22297915563122,5.88299227040045,6.88964856185007,12.5681384915725,11.5530915453053,10.1078884705519,10.1391719956096,11.5062068245506,10.0196412992774,10.8202507564229,9.70659425349864,12.3836359733599,10.7772423128716,9.64546102318525,10.714233420886,13.9838974127677,7.20025430009372,7.98641127717019,12.1602456873134,11.482366913954,12.0460006931623,10.9998990259179,10.7927503994936,12.3642764375786,7.74083448921412,8.97827634652382,10.3212465768031,10.9339975436875,12.2769312950907,10.2258315182738,8.68079749415136,11.4912865851455,6.78401664491684,9.02458427002853,3.63447830930802,2.8676884485537,5.56482805489012
|short_description=p1@Frmd4b
}}

Revision as of 11:04, 14 September 2013

Short description:p1@Frmd4b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Frmd4b_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000113355_5end
EntrezGene:Frmd4b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Frmd4b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.60
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.30
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.74
Mouse Granule cells, donor1.CNhs12131.11713-123C311.53
Mouse Granule cells, donor2.CNhs12357.11731-123E314.28
Mouse Granule cells, donor3.CNhs12108.11636-122C78.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D538.78
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F547.66
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D935.76
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D220.95
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F221.76
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D620.22
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.25
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.06
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E118.27
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.51
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D712.77
adrenal gland, embryo E14.CNhs11038.406-44C510.06
adrenal gland, embryo E16.CNhs11004.1254-43D66.09
adrenal gland, embryo E17.CNhs11043.1263-45I15.53
adrenal gland, embryo E18.CNhs11026.1262-18F55.73
adrenal gland, neonate N00.CNhs11191.1311-23C19.05
adrenal gland, neonate N25.CNhs11223.1377-27I34.40
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H12.17
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F55.99
bone (os femoris), neonate N16.CNhs11225.1525-43A62.65
bone (os femoris), neonate N20.CNhs11195.1350-25C35.82
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.04
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F18.04
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F22.49
diencephalon, neonate N30.CNhs11201.1388-42B24.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.98
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C64.03
eyeball, embryo E14.CNhs10521.399-16E23.91
eyeball, embryo E15.CNhs10593.426-16C95.94
eyeball, embryo E17.CNhs11023.1261-18D49.19
eyeball, neonate N00.CNhs11207.633-15C69.32
eyeball, neonate N01.CNhs11140.1532-43E710.89
eyeball, neonate N02.CNhs11205.1551-44G89.00
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E26.47
forelimb, embryo E12.CNhs10600.359-14H25.67
forelimb, embryo E13.CNhs10589.384-1E25.98
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E710.01
forelimb, embryo E17.CNhs10598.1517-43C48.71
forelimb, embryo E18.CNhs11008.1520-43B55.35
gonad, embryo E13.CNhs11044.1564-45I623.09
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E92.69
heart, embryo E12.CNhs11015.353-12F54.22
heart, embryo E13.CNhs11013.376-3I92.88
heart, embryo E14.CNhs10597.403-26D43.55
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C62.78
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E33.62
heart, neonate N03.CNhs11221.1349-25I22.30
heart, neonate N10.CNhs11118.749-24G13.61
heart, neonate N16.CNhs11209.782-15G13.81
heart, neonate N20.CNhs11127.821-26I64.39
heart, neonate N25.CNhs11196.1351-25D34.39
heart, neonate N30.CNhs11202.1390-42D23.09
hippocampus, adult.CNhs10478.13-16E88.83
hippocampus, neonate N00.CNhs11228.627-43G130.67
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I53.41
intestine, embryo E13.CNhs11010.381-16D54.88
intestine, embryo E15.CNhs10602.976-16D82.71
intestine, embryo E16.CNhs10585.463-22H42.42
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F22.19
intestine, neonate N10.CNhs11098.755-23A53.31
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E33.89
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I92.66
kidney, embryo E15.CNhs10997.434-16F85.26
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I24.48
kidney, embryo E18.CNhs11001.1288-20C73.30
kidney, neonate N00.CNhs11214.646-21G74.91
kidney, neonate N10.CNhs11206.758-6D56.13
kidney, neonate N20.CNhs11113.832-19I13.25
kidney, neonate N25.CNhs11122.1353-25F33.77
kidney, neonate N30.CNhs11203.1385-42H12.84
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B117.37
lung, embryo E12.CNhs10522.354-16G24.36
lung, embryo E14.CNhs10604.404-26F86.52
lung, embryo E15.CNhs11020.432-17C56.11
lung, embryo E16.CNhs10998.458-17B65.40
lung, embryo E17.CNhs10605.480-44A68.88
lung, embryo E18.CNhs10583.1287-20I67.14
lung, neonate N00.CNhs11224.640-42C613.27
lung, neonate N06.CNhs11212.683-20E519.86
lung, neonate N07.CNhs11111.715-19A321.48
lung, neonate N10.CNhs11219.750-23E622.64
lung, neonate N20.CNhs11109.822-18A429.99
lung, neonate N25.CNhs11119.1359-25C725.73
lung, neonate N30.CNhs11133.1394-42H223.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C24.17
medulla oblongata, neonate N30.CNhs11200.1396-42A35.04
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.54
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.99
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.42
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.69
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.87
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.53
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.07
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.48
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D614.23
olfactory brain, adult.CNhs10489.18-22I98.03
ovary, adult.CNhs10507.91-2I76.53
ovary, embryo E18.CNhs11040.505-44H76.05
ovary, neonate N00.CNhs11217.1299-22I413.36
oviduct, adult pregnant day01.CNhs10500.988-6G621.61
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F44.13
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E52.26
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E66.12
pituitary gland, embryo E13.CNhs11009.370-44C73.36
pituitary gland, embryo E14.CNhs11037.398-44A53.64
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F63.21
pituitary gland, embryo E17.CNhs11039.1265-44F53.78
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I710.79
placenta, adult pregnant day17.CNhs10464.577-18G38.26
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C315.50
skin, neonate N00.CNhs11124.650-25G47.43
skin, neonate N03.CNhs11215.662-22H38.44
skin, neonate N06.CNhs11097.693-20I57.52
skin, neonate N10.CNhs11108.762-6C410.34
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D11.88
spleen, neonate N20.CNhs11112.824-19H11.78
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.21
stomach, embryo E15.CNhs10603.1252-16G82.64
stomach, embryo E16.CNhs11022.459-17D43.13
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C62.84
stomach, neonate N03.CNhs11193.1340-24B83.24
stomach, neonate N07.CNhs11210.718-18A92.98
stomach, neonate N25.CNhs11104.1355-25E43.14
stomach, neonate N30.CNhs11134.1386-42I12.20
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F522.28
testis, embryo E15.CNhs11034.443-27C513.90
testis, embryo E16.CNhs11033.470-26G511.28
testis, embryo E17.CNhs11029.486-18I57.36
testis, embryo E18.CNhs11027.503-18G57.77
testis, neonate N00.CNhs11189.1300-22B77.28
testis, neonate N07.CNhs11222.726-26I45.08
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I45.47
thymus, embryo E15.CNhs11005.430-45I21.75
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E43.28
uterus, adult pregnant day19.CNhs10497.590-15F56.94
uterus, adult.CNhs10509.92-27E520.70
vagina, adult.CNhs10502.89-27D58.57
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I812.97
whole body, embryo E12.CNhs10587.857-27C915.56
whole body, embryo E13.CNhs10512.372-23H28.54
whole body, embryo E14.5.CNhs10578.420-27D26.32
whole body, embryo E14.CNhs10519.395-14B19.22
whole body, embryo E16.CNhs10514.453-14F25.88
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G512.57
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G511.55
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.11
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.14
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.02
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G510.82
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.71
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.78
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.65
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.98
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.99
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.16
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.48
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G512.05
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G511.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.79
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.74
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.98
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.93
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G512.28
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.23
whole body, embryo E17.5.CNhs10513.490-9F98.68
whole body, embryo E17.CNhs10517.475-3I511.49
whole body, embryo E18.CNhs10516.493-3B36.78
whole body, neonate N00.CNhs10525.657-19C29.02
whole body, neonate N01.CNhs10576.659-23C63.63
whole body, neonate N06.CNhs10515.692-21D12.87
whole body, neonate N10.CNhs10518.761-6B45.56





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron3.79e-0933
neuronal stem cell3.79e-0933
neuroblast3.79e-0933
electrically signaling cell3.79e-0933
CNS neuron (sensu Vertebrata)1.34e-0723
neuroblast (sensu Vertebrata)1.34e-0723
electrically responsive cell2.25e-0739
electrically active cell2.25e-0739

Uber anatomy
Ontology termp-valuen
embryo1.17e-07320
lung4.89e-0714
respiratory tube4.89e-0714
respiration organ4.89e-0714
pair of lungs4.89e-0714
lung primordium4.89e-0714
lung bud4.89e-0714







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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