FFCP PHASE1:Mm9::chr7:25917459..25917474,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=18987|HGNC=|MCL_coexpression_id=2670|UniProt=Q00196|association_with_transcript=4bp_to_NM_001163554,NM_001163555,NM_001163556,NM_011138,uc009frm.1,uc009frn.2,uc009fro.2,uc009frp.2,uc009frq.2,uc009frr.2,uc012ffp.1_5end|description=CAGE_peak_2_at_Pou2f2_5end|id=chr7:25917459..25917474,-|ontology_enrichment_celltype=CL:0000988!7.98e-14!32;CL:0002032!7.98e-14!32;CL:0000037!7.98e-14!32;CL:0000566!7.98e-14!32;CL:0000837!7.98e-14!32;CL:0002031!5.15e-12!25;CL:0002320!1.73e-09!46;CL:0000134!1.73e-09!46;CL:0000738!3.32e-09!17;CL:0002087!3.32e-09!17;CL:0000049!1.18e-08!19;CL:0000838!3.26e-07!12;CL:0000791!3.32e-07!9;CL:0000789!3.32e-07!9;CL:0002420!3.32e-07!9;CL:0002419!3.32e-07!9;CL:0000790!3.32e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,6.26e-26,32;CL:0002032,6.26e-26,32;CL:0000037,6.26e-26,32;CL:0000837,6.26e-26,32;CL:0002031,4.73e-24,25;CL:0002320,2.70e-23,46;CL:0000134,2.70e-23,46;CL:0000219,4.24e-19,54;CL:0000049,2.15e-17,19;CL:0000738,7.34e-17,17;CL:0002087,7.34e-17,17;CL:0000839,6.75e-15,13;CL:0000763,8.53e-12,16;CL:0000034,8.92e-12,97;CL:0000553,2.95e-11,6;CL:0000556,2.95e-11,6;CL:0000791,1.77e-10,9;CL:0000789,1.77e-10,9;CL:0002420,1.77e-10,9;CL:0002419,1.77e-10,9;CL:0000790,1.77e-10,9;CL:0000838,2.16e-10,12;CL:0002194,2.98e-10,4;CL:0000766,2.98e-10,4;CL:0000234,2.98e-10,4;CL:0000576,2.98e-10,4;CL:0000235,2.98e-10,4;CL:0000864,2.98e-10,4;CL:0002009,2.98e-10,4;CL:0000040,2.98e-10,4;CL:0000559,2.98e-10,4;CL:0000542,1.64e-09,13;CL:0000051,1.64e-09,13;CL:0000723,2.59e-09,91;CL:0000048,2.59e-09,91;CL:0000624,1.19e-08,8;CL:0002092,1.26e-08,3;CL:0002540,1.26e-08,3;CL:0000084,1.93e-08,11;CL:0000827,1.93e-08,11;CL:0000893,6.92e-08,6;CL:0002489,6.92e-08,6;CL:0000898,6.92e-08,6;CL:0000809,6.92e-08,6;CL:0000810,6.92e-08,6;CL:0000895,6.92e-08,6;CL:0000808,6.92e-08,6;CL:0000894,6.92e-08,6;CL:0000806,6.92e-08,6;CL:0000807,6.92e-08,6;CL:0000805,6.92e-08,6;CL:0002425,6.92e-08,6;CL:0002436,6.92e-08,6;CL:0002427,6.92e-08,6;CL:0002428,6.92e-08,6;CL:0002429,6.92e-08,6;CL:0002433,6.92e-08,6;CL:0002431,6.92e-08,6;CL:0002432,6.92e-08,6;CL:0000050,2.22e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!6.24e-18!70;UBERON:0002193!4.99e-15!48;UBERON:0002390!3.97e-13!45;UBERON:0003061!3.97e-13!45;UBERON:0002371!1.47e-11!16;UBERON:0002384!1.73e-09!46;UBERON:0001474!2.79e-09!22;UBERON:0004765!2.79e-09!22;UBERON:0001434!2.79e-09!22;UBERON:0000926!7.78e-08!193;UBERON:0004120!7.78e-08!193;UBERON:0006603!7.78e-08!193;UBERON:0005057!2.08e-07!51;UBERON:0003081!3.65e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.70e-23,46;UBERON:0002371,2.13e-21,16;UBERON:0002193,4.01e-20,48;UBERON:0002405,4.01e-20,48;UBERON:0002390,2.35e-19,45;UBERON:0003061,2.35e-19,45;UBERON:0001474,1.75e-17,22;UBERON:0004765,1.75e-17,22;UBERON:0001434,1.75e-17,22;UBERON:0002204,3.83e-11,32;UBERON:0003081,7.92e-09,87;UBERON:0002106,5.39e-07,6;UBERON:0004457,5.39e-07,6;UBERON:0000042,5.39e-07,6;UBERON:0004854,5.39e-07,6;UBERON:0009034,5.39e-07,6;UBERON:0002095,5.39e-07,6;UBERON:0004782,5.39e-07,6;UBERON:0003281,5.39e-07,6;UBERON:0009664,5.39e-07,6;UBERON:0002296,5.39e-07,6;UBERON:0005602,5.39e-07,6;UBERON:0001179,5.39e-07,6;UBERON:0006293,5.39e-07,6|phase1_expression=0,0,0,0,0,0,0,2.1950964985068,4.08287294239834,4.21316147379588,5.47897498321616,5.74359544766422,0.171200729931206,0.174840804837995,1.33243904726265,1.41732687172878,0.699561878128147,6.15151222448563,6.58149281307546,7.63901373236454,0.0850432901510698,0.198581902401771,0,0.47997726838022,0.68822784320151,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85899993932794,0.725362142011344,1.34437519656986,0,0,0,0,0,0,0,0,3.5995988691256,2.96659908770092,2.1314403448383,1.19840044207362,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0.307213066512487,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,11.9111426477699,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.117588707135705,0.251333182659351,0,0.722996784599558,0.884610551949874,0,1.54589062922275,0,0,0,0,0,2.99537811264801,2.99951365496704,1.01656181658452,0,0,0,0.173824320192276,0,0.20778804455956,0,0.203678727700633,0.746441823660558,0.252722758433675,0.420883711772948,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0.51469581422943,0.852490498186778,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0,0.162137619091711,0,0.658650345873152,0,0,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0.329397909448022,0,0,0,0,0,0,0,0,0,0,0,0,0.189709611372772,0.147610147979602,0.941992367048249,0,0.296452627087149,0.166845105716094,0.393117990226406,0.449724224769707,0.202860121388503,0.241177159752417,0.25462585178142,0.575392274901621,0.324270453550071,0.274561413188081,1.43768206527355,0.372140947668503,1.87222603868736,0.252578877947112,0.179397413521912,0,1.10851914099963,0,0,0,0,0.167506257441816,0.238043640886014,0,0.472905432318573,0.44292937929755,0.318909537314974,0.491589944147214,1.72684981865896,0.144649058581512,1.50791283939272,7.61467957346193,0.983528546038072,0.275936746304732,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.824850614862677,0,0.242780636154981,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0.16488625294148,0,0.120625849856312,0,0,0.291480836629851,0,2.9048049735635,0,0.740778109478847,1.13021074202815,2.87057878214153,2.97411625168479,3.56954702987096,1.95932033253121,2.3493995546752,0,0,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0.26175594198403,0.518459893167171,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0,0,0.0762068066549998,0.201652370273681,0.38983152295901,0.384847366561318,0.350630706544707,0,0,0,0,0,0.187682475451182,0.549454872801795,0,0,0,0,0,0,0,0,0.675022500231806,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.17230640686684,0,0,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0|short_description=p2@Pou2f2}} | ||
|EntrezGene=18987 | |||
|HGNC= | |||
|MCL_coexpression_id=2670 | |||
|UniProt=Q00196 | |||
|association_with_transcript=4bp_to_NM_001163554,NM_001163555,NM_001163556,NM_011138,uc009frm.1,uc009frn.2,uc009fro.2,uc009frp.2,uc009frq.2,uc009frr.2,uc012ffp.1_5end | |||
|description=CAGE_peak_2_at_Pou2f2_5end | |||
|id=chr7:25917459..25917474,- | |||
|ontology_enrichment_celltype=CL:0000988!7.98e-14!32;CL:0002032!7.98e-14!32;CL:0000037!7.98e-14!32;CL:0000566!7.98e-14!32;CL:0000837!7.98e-14!32;CL:0002031!5.15e-12!25;CL:0002320!1.73e-09!46;CL:0000134!1.73e-09!46;CL:0000738!3.32e-09!17;CL:0002087!3.32e-09!17;CL:0000049!1.18e-08!19;CL:0000838!3.26e-07!12;CL:0000791!3.32e-07!9;CL:0000789!3.32e-07!9;CL:0002420!3.32e-07!9;CL:0002419!3.32e-07!9;CL:0000790!3.32e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,6.26e-26,32;CL:0002032,6.26e-26,32;CL:0000037,6.26e-26,32;CL:0000837,6.26e-26,32;CL:0002031,4.73e-24,25;CL:0002320,2.70e-23,46;CL:0000134,2.70e-23,46;CL:0000219,4.24e-19,54;CL:0000049,2.15e-17,19;CL:0000738,7.34e-17,17;CL:0002087,7.34e-17,17;CL:0000839,6.75e-15,13;CL:0000763,8.53e-12,16;CL:0000034,8.92e-12,97;CL:0000553,2.95e-11,6;CL:0000556,2.95e-11,6;CL:0000791,1.77e-10,9;CL:0000789,1.77e-10,9;CL:0002420,1.77e-10,9;CL:0002419,1.77e-10,9;CL:0000790,1.77e-10,9;CL:0000838,2.16e-10,12;CL:0002194,2.98e-10,4;CL:0000766,2.98e-10,4;CL:0000234,2.98e-10,4;CL:0000576,2.98e-10,4;CL:0000235,2.98e-10,4;CL:0000864,2.98e-10,4;CL:0002009,2.98e-10,4;CL:0000040,2.98e-10,4;CL:0000559,2.98e-10,4;CL:0000542,1.64e-09,13;CL:0000051,1.64e-09,13;CL:0000723,2.59e-09,91;CL:0000048,2.59e-09,91;CL:0000624,1.19e-08,8;CL:0002092,1.26e-08,3;CL:0002540,1.26e-08,3;CL:0000084,1.93e-08,11;CL:0000827,1.93e-08,11;CL:0000893,6.92e-08,6;CL:0002489,6.92e-08,6;CL:0000898,6.92e-08,6;CL:0000809,6.92e-08,6;CL:0000810,6.92e-08,6;CL:0000895,6.92e-08,6;CL:0000808,6.92e-08,6;CL:0000894,6.92e-08,6;CL:0000806,6.92e-08,6;CL:0000807,6.92e-08,6;CL:0000805,6.92e-08,6;CL:0002425,6.92e-08,6;CL:0002436,6.92e-08,6;CL:0002427,6.92e-08,6;CL:0002428,6.92e-08,6;CL:0002429,6.92e-08,6;CL:0002433,6.92e-08,6;CL:0002431,6.92e-08,6;CL:0002432,6.92e-08,6;CL:0000050,2.22e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!6.24e-18!70;UBERON:0002193!4.99e-15!48;UBERON:0002390!3.97e-13!45;UBERON:0003061!3.97e-13!45;UBERON:0002371!1.47e-11!16;UBERON:0002384!1.73e-09!46;UBERON:0001474!2.79e-09!22;UBERON:0004765!2.79e-09!22;UBERON:0001434!2.79e-09!22;UBERON:0000926!7.78e-08!193;UBERON:0004120!7.78e-08!193;UBERON:0006603!7.78e-08!193;UBERON:0005057!2.08e-07!51;UBERON:0003081!3.65e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.70e-23,46;UBERON:0002371,2.13e-21,16;UBERON:0002193,4.01e-20,48;UBERON:0002405,4.01e-20,48;UBERON:0002390,2.35e-19,45;UBERON:0003061,2.35e-19,45;UBERON:0001474,1.75e-17,22;UBERON:0004765,1.75e-17,22;UBERON:0001434,1.75e-17,22;UBERON:0002204,3.83e-11,32;UBERON:0003081,7.92e-09,87;UBERON:0002106,5.39e-07,6;UBERON:0004457,5.39e-07,6;UBERON:0000042,5.39e-07,6;UBERON:0004854,5.39e-07,6;UBERON:0009034,5.39e-07,6;UBERON:0002095,5.39e-07,6;UBERON:0004782,5.39e-07,6;UBERON:0003281,5.39e-07,6;UBERON:0009664,5.39e-07,6;UBERON:0002296,5.39e-07,6;UBERON:0005602,5.39e-07,6;UBERON:0001179,5.39e-07,6;UBERON:0006293,5.39e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,2.1950964985068,4.08287294239834,4.21316147379588,5.47897498321616,5.74359544766422,0.171200729931206,0.174840804837995,1.33243904726265,1.41732687172878,0.699561878128147,6.15151222448563,6.58149281307546,7.63901373236454,0.0850432901510698,0.198581902401771,0,0.47997726838022,0.68822784320151,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85899993932794,0.725362142011344,1.34437519656986,0,0,0,0,0,0,0,0,3.5995988691256,2.96659908770092,2.1314403448383,1.19840044207362,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0.307213066512487,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,11.9111426477699,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.117588707135705,0.251333182659351,0,0.722996784599558,0.884610551949874,0,1.54589062922275,0,0,0,0,0,2.99537811264801,2.99951365496704,1.01656181658452,0,0,0,0.173824320192276,0,0.20778804455956,0,0.203678727700633,0.746441823660558,0.252722758433675,0.420883711772948,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0.51469581422943,0.852490498186778,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0,0.162137619091711,0,0.658650345873152,0,0,0,0,0,0,0,0.128867461322093,0,0.22237804384487,0,0,0.329397909448022,0,0,0,0,0,0,0,0,0,0,0,0,0.189709611372772,0.147610147979602,0.941992367048249,0,0.296452627087149,0.166845105716094,0.393117990226406,0.449724224769707,0.202860121388503,0.241177159752417,0.25462585178142,0.575392274901621,0.324270453550071,0.274561413188081,1.43768206527355,0.372140947668503,1.87222603868736,0.252578877947112,0.179397413521912,0,1.10851914099963,0,0,0,0,0.167506257441816,0.238043640886014,0,0.472905432318573,0.44292937929755,0.318909537314974,0.491589944147214,1.72684981865896,0.144649058581512,1.50791283939272,7.61467957346193,0.983528546038072,0.275936746304732,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.824850614862677,0,0.242780636154981,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0.16488625294148,0,0.120625849856312,0,0,0.291480836629851,0,2.9048049735635,0,0.740778109478847,1.13021074202815,2.87057878214153,2.97411625168479,3.56954702987096,1.95932033253121,2.3493995546752,0,0,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0.26175594198403,0.518459893167171,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0,0,0.0762068066549998,0.201652370273681,0.38983152295901,0.384847366561318,0.350630706544707,0,0,0,0,0,0.187682475451182,0.549454872801795,0,0,0,0,0,0,0,0,0.675022500231806,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.17230640686684,0,0,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p2@Pou2f2 | |||
}} |
Revision as of 12:52, 14 September 2013
Short description: | p2@Pou2f2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pou2f2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2670 |
Association with transcript: | 4bp_to_NM_001163554, NM_001163555, NM_001163556, NM_011138, uc009frm.1, uc009frn.2, uc009fro.2, uc009frp.2, uc009frq.2, uc009frr.2, uc012ffp.1_5end |
EntrezGene: | Pou2f2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.70e-23 | 46 |
bone marrow | 2.13e-21 | 16 |
hemolymphoid system | 4.01e-20 | 48 |
immune system | 4.01e-20 | 48 |
hematopoietic system | 2.35e-19 | 45 |
blood island | 2.35e-19 | 45 |
bone element | 1.75e-17 | 22 |
skeletal element | 1.75e-17 | 22 |
skeletal system | 1.75e-17 | 22 |
musculoskeletal system | 3.83e-11 | 32 |
lateral plate mesoderm | 7.92e-09 | 87 |
spleen | 5.39e-07 | 6 |
cavity lining | 5.39e-07 | 6 |
serous membrane | 5.39e-07 | 6 |
gastrointestinal system mesentery | 5.39e-07 | 6 |
stomach region | 5.39e-07 | 6 |
mesentery | 5.39e-07 | 6 |
gastrointestinal system serosa | 5.39e-07 | 6 |
mesentery of stomach | 5.39e-07 | 6 |
gut mesentery | 5.39e-07 | 6 |
dorsal mesentery | 5.39e-07 | 6 |
dorsal mesogastrium | 5.39e-07 | 6 |
peritoneal cavity | 5.39e-07 | 6 |
spleen primordium | 5.39e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.