FFCP PHASE1:Mm9::chr8:113245362..113245386,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=244654|HGNC=|MCL_coexpression_id=1233|UniProt=Q6P9S0|association_with_transcript=0bp_to_ENSMUST00000052457,NM_198625,uc009nkx.1_5end|description=CAGE_peak_1_at_Mtss1l_5end|id=chr8:113245362..113245386,+|ontology_enrichment_celltype=CL:0000221!1.21e-16!44;CL:0000133!1.21e-16!44;CL:0002319!1.29e-16!43;CL:0000540!2.04e-13!33;CL:0000047!2.04e-13!33;CL:0000031!2.04e-13!33;CL:0000404!2.04e-13!33;CL:0000055!3.16e-12!50;CL:0000117!1.37e-10!23;CL:0000337!1.37e-10!23;CL:0000393!1.01e-09!39;CL:0000211!1.01e-09!39|ontology_enrichment_celltype_v019_2=CL:0000221,1.11e-16,44;CL:0000133,1.11e-16,44;CL:0002319,1.19e-16,43;CL:0000540,1.91e-13,33;CL:0000047,1.91e-13,33;CL:0000031,1.91e-13,33;CL:0000404,1.91e-13,33;CL:0000117,1.30e-10,23;CL:0000337,1.30e-10,23;CL:0000393,9.61e-10,39;CL:0000211,9.61e-10,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.12e-31!73;UBERON:0005743!2.12e-31!73;UBERON:0000073!7.49e-30!75;UBERON:0001016!7.49e-30!75;UBERON:0004121!3.58e-24!102;UBERON:0000924!3.58e-24!102;UBERON:0006601!3.58e-24!102;UBERON:0001049!7.56e-21!52;UBERON:0005068!7.56e-21!52;UBERON:0006241!7.56e-21!52;UBERON:0007135!7.56e-21!52;UBERON:0000955!7.38e-20!50;UBERON:0006238!7.38e-20!50;UBERON:0002616!2.74e-19!49;UBERON:0000033!3.00e-19!63;UBERON:0002346!6.80e-19!71;UBERON:0003075!6.80e-19!71;UBERON:0007284!6.80e-19!71;UBERON:0002020!3.69e-16!34;UBERON:0003056!3.25e-14!49;UBERON:0003080!3.92e-14!40;UBERON:0002780!1.60e-13!39;UBERON:0001890!1.60e-13!39;UBERON:0006240!1.60e-13!39;UBERON:0002791!1.70e-13!29;UBERON:0003528!1.70e-13!29;UBERON:0001893!1.70e-13!29;UBERON:0000153!1.62e-11!94;UBERON:0007811!4.01e-11!86;UBERON:0000956!7.92e-10!21;UBERON:0001869!7.92e-10!21;UBERON:0000203!7.92e-10!21;UBERON:0000025!3.99e-09!114;UBERON:0004111!5.59e-09!122;UBERON:0002619!7.90e-09!17;UBERON:0000468!1.11e-07!333;UBERON:0003076!1.24e-07!12;UBERON:0003057!1.24e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.79e-31,73;UBERON:0001016,6.39e-30,75;UBERON:0004121,5.70e-27,95;UBERON:0000924,5.70e-27,95;UBERON:0006601,5.70e-27,95;UBERON:0000073,3.53e-22,54;UBERON:0002346,3.97e-22,64;UBERON:0003075,3.97e-22,64;UBERON:0007284,3.97e-22,64;UBERON:0001049,6.79e-21,52;UBERON:0005068,6.79e-21,52;UBERON:0006241,6.79e-21,52;UBERON:0007135,6.79e-21,52;UBERON:0010371,3.34e-20,73;UBERON:0000955,5.39e-18,47;UBERON:0006238,5.39e-18,47;UBERON:0002616,1.95e-17,46;UBERON:0002020,3.40e-16,34;UBERON:0010314,2.72e-15,92;UBERON:0003056,3.03e-14,49;UBERON:0003080,3.65e-14,40;UBERON:0002780,1.50e-13,39;UBERON:0001890,1.50e-13,39;UBERON:0006240,1.50e-13,39;UBERON:0003528,1.59e-13,29;UBERON:0002791,1.59e-13,29;UBERON:0001893,1.59e-13,29;UBERON:0000956,7.56e-10,21;UBERON:0001869,7.56e-10,21;UBERON:0000203,7.56e-10,21;UBERON:0000025,4.13e-09,114;UBERON:0004111,5.77e-09,122;UBERON:0002619,7.59e-09,17;UBERON:0003076,1.20e-07,12;UBERON:0003057,1.20e-07,12;UBERON:0000922,8.91e-07,320|phase1_expression=24.5027736070335,0,0,0,0,0.33575854382378,0,0,0.140788722151667,0,0,0,0,0.0874204024189974,1.66554880907831,0.809901069559304,0,0.315462165358238,0,0,24.8326407241124,0.198581902401771,0.261199789138935,0.159992422793407,0,0,0.430761996159075,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,7.1761186246079,7.09638518536602,4.40512205188036,31.2956537739216,211.266376532653,174.430829091171,172.459320478889,76.1526133641972,172.503077237966,0,0.725362142011344,0,5.40244815675489,12.6074713573053,5.15672092277442,65.5505333185097,70.8847912224524,54.5095007015314,13.2149367506962,10.6715375533337,4.04954872776629,6.92206453796882,2.8419204597844,182.756067416227,400.739692450381,36.0839850833502,34.4265142745811,33.4416688548697,107.119119151426,70.4570645635647,38.0946385558507,37.6672701101669,40.4456266108409,106.812404569407,102.14987046815,103.684409947964,54.7328094080304,56.1734131718795,47.9240300912219,86.8259126894295,73.7219019141501,88.9285802061035,101.646861988415,92.9687075618142,58.3430265433191,3.63485727999283,11.260162455911,20.2905142091174,4.30211938490693,2.03991400112325,0.539703191637817,1.94932925234301,0,21.3475518600263,87.2603251599656,51.6974149159709,70.3145753275577,26.1968760784626,147.575449026466,438.265012295431,519.078693301932,0.865964164044856,1.01343946190039,0,7.4219521817389,2.33044095282455,9.05497048295431,12.6644288539279,13.0920155674221,8.99400439298628,10.2491395575783,13.8754674420132,8.29399502775858,4.44950941921873,16.6289260457898,10.6153266233985,41.2505467365893,32.0220201767571,16.4857586065976,5.59175283654366,150.196548866924,139.072613324134,5.10914110417183,0.239630249011841,0,0.381210681219194,113.391514029451,77.7751024791665,98.3873577043728,73.7015117615252,77.4817835710901,99.5304733440293,95.8845864730448,17.0071737630028,20.4027431800553,6.57079171927554,14.7309299120532,14.8337304977482,17.012755728077,22.687828355474,22.3043130396858,42.1826294738233,39.0746846868792,40.5728467343626,34.9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| ||
|EntrezGene=244654 | |||
|HGNC= | |||
|MCL_coexpression_id=1233 | |||
|UniProt=Q6P9S0 | |||
|association_with_transcript=0bp_to_ENSMUST00000052457,NM_198625,uc009nkx.1_5end | |||
|description=CAGE_peak_1_at_Mtss1l_5end | |||
|id=chr8:113245362..113245386,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.21e-16!44;CL:0000133!1.21e-16!44;CL:0002319!1.29e-16!43;CL:0000540!2.04e-13!33;CL:0000047!2.04e-13!33;CL:0000031!2.04e-13!33;CL:0000404!2.04e-13!33;CL:0000055!3.16e-12!50;CL:0000117!1.37e-10!23;CL:0000337!1.37e-10!23;CL:0000393!1.01e-09!39;CL:0000211!1.01e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.11e-16,44;CL:0000133,1.11e-16,44;CL:0002319,1.19e-16,43;CL:0000540,1.91e-13,33;CL:0000047,1.91e-13,33;CL:0000031,1.91e-13,33;CL:0000404,1.91e-13,33;CL:0000117,1.30e-10,23;CL:0000337,1.30e-10,23;CL:0000393,9.61e-10,39;CL:0000211,9.61e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.12e-31!73;UBERON:0005743!2.12e-31!73;UBERON:0000073!7.49e-30!75;UBERON:0001016!7.49e-30!75;UBERON:0004121!3.58e-24!102;UBERON:0000924!3.58e-24!102;UBERON:0006601!3.58e-24!102;UBERON:0001049!7.56e-21!52;UBERON:0005068!7.56e-21!52;UBERON:0006241!7.56e-21!52;UBERON:0007135!7.56e-21!52;UBERON:0000955!7.38e-20!50;UBERON:0006238!7.38e-20!50;UBERON:0002616!2.74e-19!49;UBERON:0000033!3.00e-19!63;UBERON:0002346!6.80e-19!71;UBERON:0003075!6.80e-19!71;UBERON:0007284!6.80e-19!71;UBERON:0002020!3.69e-16!34;UBERON:0003056!3.25e-14!49;UBERON:0003080!3.92e-14!40;UBERON:0002780!1.60e-13!39;UBERON:0001890!1.60e-13!39;UBERON:0006240!1.60e-13!39;UBERON:0002791!1.70e-13!29;UBERON:0003528!1.70e-13!29;UBERON:0001893!1.70e-13!29;UBERON:0000153!1.62e-11!94;UBERON:0007811!4.01e-11!86;UBERON:0000956!7.92e-10!21;UBERON:0001869!7.92e-10!21;UBERON:0000203!7.92e-10!21;UBERON:0000025!3.99e-09!114;UBERON:0004111!5.59e-09!122;UBERON:0002619!7.90e-09!17;UBERON:0000468!1.11e-07!333;UBERON:0003076!1.24e-07!12;UBERON:0003057!1.24e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.79e-31,73;UBERON:0001016,6.39e-30,75;UBERON:0004121,5.70e-27,95;UBERON:0000924,5.70e-27,95;UBERON:0006601,5.70e-27,95;UBERON:0000073,3.53e-22,54;UBERON:0002346,3.97e-22,64;UBERON:0003075,3.97e-22,64;UBERON:0007284,3.97e-22,64;UBERON:0001049,6.79e-21,52;UBERON:0005068,6.79e-21,52;UBERON:0006241,6.79e-21,52;UBERON:0007135,6.79e-21,52;UBERON:0010371,3.34e-20,73;UBERON:0000955,5.39e-18,47;UBERON:0006238,5.39e-18,47;UBERON:0002616,1.95e-17,46;UBERON:0002020,3.40e-16,34;UBERON:0010314,2.72e-15,92;UBERON:0003056,3.03e-14,49;UBERON:0003080,3.65e-14,40;UBERON:0002780,1.50e-13,39;UBERON:0001890,1.50e-13,39;UBERON:0006240,1.50e-13,39;UBERON:0003528,1.59e-13,29;UBERON:0002791,1.59e-13,29;UBERON:0001893,1.59e-13,29;UBERON:0000956,7.56e-10,21;UBERON:0001869,7.56e-10,21;UBERON:0000203,7.56e-10,21;UBERON:0000025,4.13e-09,114;UBERON:0004111,5.77e-09,122;UBERON:0002619,7.59e-09,17;UBERON:0003076,1.20e-07,12;UBERON:0003057,1.20e-07,12;UBERON:0000922,8.91e-07,320 | |||
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| |||
|short_description=p1@Mtss1l | |||
}} |
Revision as of 14:45, 14 September 2013
Short description: | p1@Mtss1l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mtss1l_5end |
Coexpression cluster: | MCL_coexpression_mm9:1233 |
Association with transcript: | 0bp_to_ENSMUST00000052457, NM_198625, uc009nkx.1_5end |
EntrezGene: | Mtss1l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.11e-16 | 44 |
neurectodermal cell | 1.11e-16 | 44 |
neural cell | 1.19e-16 | 43 |
neuron | 1.91e-13 | 33 |
neuronal stem cell | 1.91e-13 | 33 |
neuroblast | 1.91e-13 | 33 |
electrically signaling cell | 1.91e-13 | 33 |
CNS neuron (sensu Vertebrata) | 1.30e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.30e-10 | 23 |
electrically responsive cell | 9.61e-10 | 39 |
electrically active cell | 9.61e-10 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.