FFCP PHASE1:Mm9::chr8:89996502..89996513,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12404|HGNC=|MCL_coexpression_id=30|UniProt=Q9R171|association_with_transcript=0bp_to_ENSMUST00000034076_5end|description=CAGE_peak_4_at_Cbln1_5end|id=chr8:89996502..89996513,-|ontology_enrichment_celltype=CL:0000117!9.96e-21!23;CL:0000337!9.96e-21!23;CL:0000540!1.24e-12!33;CL:0000047!1.24e-12!33;CL:0000031!1.24e-12!33;CL:0000404!1.24e-12!33;CL:0000393!2.27e-09!39;CL:0000211!2.27e-09!39;CL:0000221!3.98e-08!44;CL:0000133!3.98e-08!44;CL:0002319!9.41e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,2.93e-33,23;CL:0000337,2.93e-33,23;CL:0000540,1.14e-21,33;CL:0000047,1.14e-21,33;CL:0000031,1.14e-21,33;CL:0000404,1.14e-21,33;CL:0000393,1.40e-17,39;CL:0000211,1.40e-17,39;CL:0002319,1.72e-15,43;CL:0000221,4.98e-15,44;CL:0000133,4.98e-15,44;CL:0002321,1.04e-07,70;CL:0002614,1.16e-07,3;CL:0002613,3.33e-07,3;CL:0000120,5.98e-07,3;CL:0002610,6.91e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.26e-23!52;UBERON:0005068!3.26e-23!52;UBERON:0006241!3.26e-23!52;UBERON:0007135!3.26e-23!52;UBERON:0000955!1.05e-21!50;UBERON:0006238!1.05e-21!50;UBERON:0001017!3.09e-21!73;UBERON:0005743!3.09e-21!73;UBERON:0002616!8.87e-21!49;UBERON:0000033!9.21e-21!63;UBERON:0000073!3.45e-20!75;UBERON:0001016!3.45e-20!75;UBERON:0002346!6.02e-20!71;UBERON:0003075!6.02e-20!71;UBERON:0007284!6.02e-20!71;UBERON:0004121!3.42e-17!102;UBERON:0000924!3.42e-17!102;UBERON:0006601!3.42e-17!102;UBERON:0003080!3.75e-16!40;UBERON:0003056!1.15e-15!49;UBERON:0002780!1.74e-15!39;UBERON:0001890!1.74e-15!39;UBERON:0006240!1.74e-15!39;UBERON:0002020!5.31e-14!34;UBERON:0007811!3.04e-12!86;UBERON:0000153!2.95e-11!94;UBERON:0002791!2.98e-10!29;UBERON:0003528!2.98e-10!29;UBERON:0001893!2.98e-10!29;UBERON:0002420!2.74e-08!8;UBERON:0007245!2.74e-08!8;UBERON:0010009!2.74e-08!8;UBERON:0010011!2.74e-08!8;UBERON:0000454!2.74e-08!8;UBERON:0003076!8.38e-08!12;UBERON:0003057!8.38e-08!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.07e-25,54;UBERON:0001017,2.19e-25,73;UBERON:0001016,1.66e-24,75;UBERON:0001049,2.32e-22,52;UBERON:0005068,2.32e-22,52;UBERON:0006241,2.32e-22,52;UBERON:0007135,2.32e-22,52;UBERON:0004121,9.33e-18,95;UBERON:0000924,9.33e-18,95;UBERON:0006601,9.33e-18,95;UBERON:0000955,1.80e-17,47;UBERON:0006238,1.80e-17,47;UBERON:0002346,5.48e-17,64;UBERON:0003075,5.48e-17,64;UBERON:0007284,5.48e-17,64;UBERON:0002616,4.68e-16,46;UBERON:0002020,1.09e-14,34;UBERON:0010371,4.00e-14,73;UBERON:0003076,1.36e-13,12;UBERON:0003057,1.36e-13,12;UBERON:0002420,3.46e-13,8;UBERON:0007245,3.46e-13,8;UBERON:0010009,3.46e-13,8;UBERON:0010011,3.46e-13,8;UBERON:0000454,3.46e-13,8;UBERON:0002780,5.58e-12,39;UBERON:0001890,5.58e-12,39;UBERON:0006240,5.58e-12,39;UBERON:0003080,1.40e-11,40;UBERON:0010314,6.08e-10,92;UBERON:0003528,6.17e-10,29;UBERON:0002791,6.17e-10,29;UBERON:0001893,6.17e-10,29;UBERON:0003056,9.72e-09,49;UBERON:0002240,1.03e-08,6;UBERON:0005174,1.03e-08,6;UBERON:0001137,1.03e-08,6;UBERON:0002038,1.16e-07,3;UBERON:0009663,1.16e-07,3;UBERON:0009661,1.16e-07,3;UBERON:0000125,1.16e-07,3;UBERON:0002308,1.16e-07,3;UBERON:0000473,1.23e-07,14;UBERON:0000369,2.49e-07,5;UBERON:0002435,2.49e-07,5;UBERON:0000204,2.49e-07,5;UBERON:0010082,2.49e-07,5;UBERON:0001948,3.14e-07,5;UBERON:0002315,3.14e-07,5;UBERON:0003135,4.75e-07,15;UBERON:0004684,6.91e-07,3;UBERON:0002275,6.91e-07,3;UBERON:0000025,7.01e-07,114|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0,1.14058573539325,0.945041568321835,3.36519938162211,5.42736870367227,1.54607978666129,2.08234358665422,1.15014565221884,0.919218786610021,1.10115880999389,2.042997409363,2.91852413186863,3.42904348098504,3.56801810049398,1.04182674111352,4.18774498502071,2.8138130501584,2.13917546887534,0.883885756421003,2.13557521198654,1.67759501242771,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0,0.150722640552623,0.352766121407114,0,0,0,0,0,0,0,0,17.2740670236813,31.2075593152048,0,0,0,0,0.898743836428936,0.457500602818626,2.76439574648302,0.521472960576829,1.79000820131231,0.83115217823824,0.486723789203273,0,0,0,0,0,0.229902104433473,0,0.30140963567143,0.136072998302656,0.2562274405697,0.281105173679186,0,0.862271971731369,0.189106080167819,0,0,0,0,0,0.59710280045548,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0,0.420579897128254,2.16099685996497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,1.99259867206745,0,0,0,0,0,0,0,0,0,0,0,3.21321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,2.71653235943784,0.857348140126369,1.24138163549592,1.24858172321449,1.15184314421485,0.608929898229199,0,0,0,0,0,0.0603129249281559,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,4.03694674318743,3.64008679005615,4.27792614356905,5.29555276258697,4.05494701177868,6.21993364822496,1.8228613878153,0.419437377702843,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0.221985953374065,0,0,0,0,0,0.643105137237198,0,0.564751842617067,0.460325236507177,0,0.343706364687375,0,0,0,0,1.35942722695261,0,0.207574695168353,0,0.341467211508268,0,0.419226325255965,0.551530525350042,0.44449345560323,0.412070114477788,0,0,0,0.188626341386076,0.280924522409647,0.128050304809739,0.287177344778066,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0.70990322463735,0,0.290692833264657,0.0941093804153306,0.25384382367503,0.182927972872773,0.263069711437843,0.271608227691724,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0.749431733813838,0,0.214871054048298,0,0,0|short_description=p4@Cbln1}} | ||
|EntrezGene=12404 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|UniProt=Q9R171 | |||
|association_with_transcript=0bp_to_ENSMUST00000034076_5end | |||
|description=CAGE_peak_4_at_Cbln1_5end | |||
|id=chr8:89996502..89996513,- | |||
|ontology_enrichment_celltype=CL:0000117!9.96e-21!23;CL:0000337!9.96e-21!23;CL:0000540!1.24e-12!33;CL:0000047!1.24e-12!33;CL:0000031!1.24e-12!33;CL:0000404!1.24e-12!33;CL:0000393!2.27e-09!39;CL:0000211!2.27e-09!39;CL:0000221!3.98e-08!44;CL:0000133!3.98e-08!44;CL:0002319!9.41e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.93e-33,23;CL:0000337,2.93e-33,23;CL:0000540,1.14e-21,33;CL:0000047,1.14e-21,33;CL:0000031,1.14e-21,33;CL:0000404,1.14e-21,33;CL:0000393,1.40e-17,39;CL:0000211,1.40e-17,39;CL:0002319,1.72e-15,43;CL:0000221,4.98e-15,44;CL:0000133,4.98e-15,44;CL:0002321,1.04e-07,70;CL:0002614,1.16e-07,3;CL:0002613,3.33e-07,3;CL:0000120,5.98e-07,3;CL:0002610,6.91e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.26e-23!52;UBERON:0005068!3.26e-23!52;UBERON:0006241!3.26e-23!52;UBERON:0007135!3.26e-23!52;UBERON:0000955!1.05e-21!50;UBERON:0006238!1.05e-21!50;UBERON:0001017!3.09e-21!73;UBERON:0005743!3.09e-21!73;UBERON:0002616!8.87e-21!49;UBERON:0000033!9.21e-21!63;UBERON:0000073!3.45e-20!75;UBERON:0001016!3.45e-20!75;UBERON:0002346!6.02e-20!71;UBERON:0003075!6.02e-20!71;UBERON:0007284!6.02e-20!71;UBERON:0004121!3.42e-17!102;UBERON:0000924!3.42e-17!102;UBERON:0006601!3.42e-17!102;UBERON:0003080!3.75e-16!40;UBERON:0003056!1.15e-15!49;UBERON:0002780!1.74e-15!39;UBERON:0001890!1.74e-15!39;UBERON:0006240!1.74e-15!39;UBERON:0002020!5.31e-14!34;UBERON:0007811!3.04e-12!86;UBERON:0000153!2.95e-11!94;UBERON:0002791!2.98e-10!29;UBERON:0003528!2.98e-10!29;UBERON:0001893!2.98e-10!29;UBERON:0002420!2.74e-08!8;UBERON:0007245!2.74e-08!8;UBERON:0010009!2.74e-08!8;UBERON:0010011!2.74e-08!8;UBERON:0000454!2.74e-08!8;UBERON:0003076!8.38e-08!12;UBERON:0003057!8.38e-08!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.07e-25,54;UBERON:0001017,2.19e-25,73;UBERON:0001016,1.66e-24,75;UBERON:0001049,2.32e-22,52;UBERON:0005068,2.32e-22,52;UBERON:0006241,2.32e-22,52;UBERON:0007135,2.32e-22,52;UBERON:0004121,9.33e-18,95;UBERON:0000924,9.33e-18,95;UBERON:0006601,9.33e-18,95;UBERON:0000955,1.80e-17,47;UBERON:0006238,1.80e-17,47;UBERON:0002346,5.48e-17,64;UBERON:0003075,5.48e-17,64;UBERON:0007284,5.48e-17,64;UBERON:0002616,4.68e-16,46;UBERON:0002020,1.09e-14,34;UBERON:0010371,4.00e-14,73;UBERON:0003076,1.36e-13,12;UBERON:0003057,1.36e-13,12;UBERON:0002420,3.46e-13,8;UBERON:0007245,3.46e-13,8;UBERON:0010009,3.46e-13,8;UBERON:0010011,3.46e-13,8;UBERON:0000454,3.46e-13,8;UBERON:0002780,5.58e-12,39;UBERON:0001890,5.58e-12,39;UBERON:0006240,5.58e-12,39;UBERON:0003080,1.40e-11,40;UBERON:0010314,6.08e-10,92;UBERON:0003528,6.17e-10,29;UBERON:0002791,6.17e-10,29;UBERON:0001893,6.17e-10,29;UBERON:0003056,9.72e-09,49;UBERON:0002240,1.03e-08,6;UBERON:0005174,1.03e-08,6;UBERON:0001137,1.03e-08,6;UBERON:0002038,1.16e-07,3;UBERON:0009663,1.16e-07,3;UBERON:0009661,1.16e-07,3;UBERON:0000125,1.16e-07,3;UBERON:0002308,1.16e-07,3;UBERON:0000473,1.23e-07,14;UBERON:0000369,2.49e-07,5;UBERON:0002435,2.49e-07,5;UBERON:0000204,2.49e-07,5;UBERON:0010082,2.49e-07,5;UBERON:0001948,3.14e-07,5;UBERON:0002315,3.14e-07,5;UBERON:0003135,4.75e-07,15;UBERON:0004684,6.91e-07,3;UBERON:0002275,6.91e-07,3;UBERON:0000025,7.01e-07,114 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,1.5869729378161,1.90149421051854,0,0,0,0,0,0,0,1.14058573539325,0.945041568321835,3.36519938162211,5.42736870367227,1.54607978666129,2.08234358665422,1.15014565221884,0.919218786610021,1.10115880999389,2.042997409363,2.91852413186863,3.42904348098504,3.56801810049398,1.04182674111352,4.18774498502071,2.8138130501584,2.13917546887534,0.883885756421003,2.13557521198654,1.67759501242771,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0,0.150722640552623,0.352766121407114,0,0,0,0,0,0,0,0,17.2740670236813,31.2075593152048,0,0,0,0,0.898743836428936,0.457500602818626,2.76439574648302,0.521472960576829,1.79000820131231,0.83115217823824,0.486723789203273,0,0,0,0,0,0.229902104433473,0,0.30140963567143,0.136072998302656,0.2562274405697,0.281105173679186,0,0.862271971731369,0.189106080167819,0,0,0,0,0,0.59710280045548,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0,0.420579897128254,2.16099685996497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9266070798535,1.99259867206745,0,0,0,0,0,0,0,0,0,0,0,3.21321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,2.71653235943784,0.857348140126369,1.24138163549592,1.24858172321449,1.15184314421485,0.608929898229199,0,0,0,0,0,0.0603129249281559,0,0,0,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,4.03694674318743,3.64008679005615,4.27792614356905,5.29555276258697,4.05494701177868,6.21993364822496,1.8228613878153,0.419437377702843,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0.221985953374065,0,0,0,0,0,0.643105137237198,0,0.564751842617067,0.460325236507177,0,0.343706364687375,0,0,0,0,1.35942722695261,0,0.207574695168353,0,0.341467211508268,0,0.419226325255965,0.551530525350042,0.44449345560323,0.412070114477788,0,0,0,0.188626341386076,0.280924522409647,0.128050304809739,0.287177344778066,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0.342869252385415,0.70990322463735,0,0.290692833264657,0.0941093804153306,0.25384382367503,0.182927972872773,0.263069711437843,0.271608227691724,0,0.237270036248348,0.197008964751127,0,0.154936841185966,0,0.749431733813838,0,0.214871054048298,0,0,0 | |||
|short_description=p4@Cbln1 | |||
}} |
Revision as of 16:23, 14 September 2013
Short description: | p4@Cbln1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Cbln1_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 0bp_to_ENSMUST00000034076_5end |
EntrezGene: | Cbln1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.93e-33 | 23 |
neuroblast (sensu Vertebrata) | 2.93e-33 | 23 |
neuron | 1.14e-21 | 33 |
neuronal stem cell | 1.14e-21 | 33 |
neuroblast | 1.14e-21 | 33 |
electrically signaling cell | 1.14e-21 | 33 |
electrically responsive cell | 1.40e-17 | 39 |
electrically active cell | 1.40e-17 | 39 |
neural cell | 1.72e-15 | 43 |
ectodermal cell | 4.98e-15 | 44 |
neurectodermal cell | 4.98e-15 | 44 |
embryonic cell | 1.04e-07 | 70 |
neuron of the substantia nigra | 1.16e-07 | 3 |
striatum neuron | 3.33e-07 | 3 |
granule cell | 5.98e-07 | 3 |
raphe nuclei neuron | 6.91e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.