FFCP PHASE1:Mm9::chr8:96676635..96676651,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17751|HGNC=|MCL_coexpression_id=176|UniProt=P28184,Q3USP9|association_with_transcript=128bp_to_ENSMUST00000034211,NM_013603,uc009mvu.2_5end|description=CAGE_peak_1_at_Mt3_5end|id=chr8:96676635..96676651,+|ontology_enrichment_celltype=CL:0000221!1.60e-15!44;CL:0000133!1.60e-15!44;CL:0002319!4.42e-15!43;CL:0000117!3.18e-11!23;CL:0000337!3.18e-11!23;CL:0000055!2.43e-10!50;CL:0000540!2.30e-09!33;CL:0000047!2.30e-09!33;CL:0000031!2.30e-09!33;CL:0000404!2.30e-09!33;CL:0000333!2.27e-07!10;CL:0000095!2.27e-07!10;CL:0000243!2.27e-07!10;CL:0000123!2.27e-07!10;CL:0000125!2.27e-07!10;CL:0000030!2.27e-07!10;CL:0000339!2.27e-07!10;CL:0002453!9.40e-07!8|ontology_enrichment_celltype_v019_2=CL:0000221,1.08e-15,44;CL:0000133,1.08e-15,44;CL:0002319,3.03e-15,43;CL:0000117,2.43e-11,23;CL:0000337,2.43e-11,23;CL:0000540,1.85e-09,33;CL:0000047,1.85e-09,33;CL:0000031,1.85e-09,33;CL:0000404,1.85e-09,33;CL:0000333,1.93e-07,10;CL:0000095,1.93e-07,10;CL:0000243,1.93e-07,10;CL:0000123,1.93e-07,10;CL:0000125,1.93e-07,10;CL:0000030,1.93e-07,10;CL:0000339,1.93e-07,10;CL:0002453,8.12e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!6.76e-32!75;UBERON:0001016!6.76e-32!75;UBERON:0001017!6.28e-31!73;UBERON:0005743!6.28e-31!73;UBERON:0001049!6.26e-26!52;UBERON:0005068!6.26e-26!52;UBERON:0006241!6.26e-26!52;UBERON:0007135!6.26e-26!52;UBERON:0000955!3.70e-25!50;UBERON:0006238!3.70e-25!50;UBERON:0004121!1.52e-24!102;UBERON:0000924!1.52e-24!102;UBERON:0006601!1.52e-24!102;UBERON:0002616!1.63e-24!49;UBERON:0000033!5.03e-23!63;UBERON:0002346!8.36e-22!71;UBERON:0003075!8.36e-22!71;UBERON:0007284!8.36e-22!71;UBERON:0003080!1.07e-18!40;UBERON:0002020!2.65e-18!34;UBERON:0002780!4.26e-18!39;UBERON:0001890!4.26e-18!39;UBERON:0006240!4.26e-18!39;UBERON:0003056!6.24e-17!49;UBERON:0002791!7.53e-16!29;UBERON:0003528!7.53e-16!29;UBERON:0001893!7.53e-16!29;UBERON:0000956!3.38e-12!21;UBERON:0001869!3.38e-12!21;UBERON:0000203!3.38e-12!21;UBERON:0002619!1.34e-10!17;UBERON:0007811!6.60e-10!86;UBERON:0003076!8.67e-08!12;UBERON:0003057!8.67e-08!12;UBERON:0000153!1.14e-07!94;UBERON:0004111!2.44e-07!122;UBERON:0002021!5.49e-07!10;UBERON:0000411!5.49e-07!10;UBERON:0001950!5.49e-07!10;UBERON:0000479!6.61e-07!349|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.88e-32,75;UBERON:0001017,2.75e-31,73;UBERON:0000073,1.51e-27,54;UBERON:0001049,3.16e-26,52;UBERON:0005068,3.16e-26,52;UBERON:0006241,3.16e-26,52;UBERON:0007135,3.16e-26,52;UBERON:0004121,8.30e-26,95;UBERON:0000924,8.30e-26,95;UBERON:0006601,8.30e-26,95;UBERON:0002346,9.22e-24,64;UBERON:0003075,9.22e-24,64;UBERON:0007284,9.22e-24,64;UBERON:0010314,1.22e-23,92;UBERON:0000955,1.90e-23,47;UBERON:0006238,1.90e-23,47;UBERON:0002616,8.26e-23,46;UBERON:0010371,1.05e-19,73;UBERON:0003080,6.64e-19,40;UBERON:0002020,1.66e-18,34;UBERON:0002780,2.68e-18,39;UBERON:0001890,2.68e-18,39;UBERON:0006240,2.68e-18,39;UBERON:0003056,4.06e-17,49;UBERON:0003528,5.05e-16,29;UBERON:0002791,5.05e-16,29;UBERON:0001893,5.05e-16,29;UBERON:0000956,2.51e-12,21;UBERON:0001869,2.51e-12,21;UBERON:0000203,2.51e-12,21;UBERON:0002619,1.04e-10,17;UBERON:0003076,7.28e-08,12;UBERON:0003057,7.28e-08,12;UBERON:0004111,2.47e-07,122;UBERON:0002021,4.71e-07,10;UBERON:0000411,4.71e-07,10;UBERON:0001950,4.71e-07,10|phase1_expression=17.9366708757369,0,0.454999239389536,0,0,1.34303417529512,1.63528848416868,0,0,0,0,0,0,0,0.666219523631325,0,0,0,0.137114433605739,0,255.555086903965,0,0,1.27993938234725,0.91763712426868,1.14846392823004,0,0.430942465371778,3.99049180858385,1.51218077855958,1.33038306393183,8.25539875497521,11.6862309641068,15.8481681015439,0.288851619751275,0.332469290716985,0.612508068787107,0,0,0,0,0,0,0,0,0,553.933071798412,10544.1326128712,5643.07897590038,9602.50385548071,2911.29761054266,5080.2156246581,0,0.725362142011344,0,2.31533492432352,1.71920063963254,7.73508138416164,85.9844958653291,116.907006419119,86.2010708768404,167.050354310082,232.105941785007,0.899899717281399,32.6325899647102,0.7104801149461,4898.46180697592,15094.4003428626,79.4262430282939,151.206650931494,99.2733817578523,384.200574023116,394.471214139582,114.896369663627,133.225204715349,196.712820334544,1384.15662416232,393.021626626208,933.159689531679,60.4039197804288,88.8345019379398,56.7795573906868,595.218153870944,857.65021768828,1301.38267631509,354.438188324822,251.143644929618,159.557925626457,79.6639553865096,116.077916324023,0.289864488701678,0,0,3.77792234146472,0,0,86.2328739608956,0,0,0,145.209565789758,0,0,0,4.11332977921307,4.05375784760158,2.52762222507392,49.6699876777911,0.517875767294343,7.86743337043571,2.77576522825817,7.61163695780353,7.84092690670599,5.27529241934179,13.0523464920632,4.77533047052767,1.48316980640624,1.15679485535929,53.0766331169925,65.8391079285955,60.7314175766082,76.1254147422299,18.6391761218122,478.403822316868,1073.41437241896,4.34276993854605,0.11981512450592,0,0.127070227073065,746.256965514827,863.303637518748,217.256374803143,696.514051010452,583.286958170484,1004.03183131179,697.961913717493,25.8671984179803,89.1997979274367,38.6665820403522,30.0931853917658,2.34216797332867,4.13823787980251,5.94205028357652,8.89158425230719,10.3415478710018,11.4021211053516,14.4300655821982,49.412343811152,0,0.189106080167819,0.879755620819744,2.19195732427575,0.556094498451196,5.57203466435466,9.4659782747654,21.4957008163973,0,0,0,16.5700618028402,22.045449638223,34.0317296161318,45.2182444967752,53.9133994987886,69.5744679122076,68.1324458118695,79.4089268142873,60.9515087156625,31.7600510333017,21.1776028662033,7.53939928776458,7.45619935869195,7.46470391989572,13.0180226197561,1077.94627633972,246.250737423628,0.991256348951394,4.7601101999438,4.69234151177515,3.94802342162745,3.22168653305233,2.62188582010345,2.44615848229357,3.42406127002606,4.2707615539006,3.45867804920423,5.52937459360593,5.96869416123452,5.45899443933536,7.19055526923377,9.94235029423593,7.56736838366595,2.0863469104839,1.14248512609729,1.1270773567308,2.44381593414377,0.969762435838129,1.8936671370386,1.01178459398812,1.62371162777562,1.8839847340965,5.05928372079382,0,1.16791574001266,0.393117990226406,0.224862112384854,0,0,0.50925170356284,0,0.486405680325106,0.274561413188081,0,0.372140947668503,0.624075346229121,0,0.179397413521912,0.482443521363367,3.32555742299888,6.253216588426,1.79261474086228,3.56464680127895,1.87752198630802,3.85264392116176,5.2369600994923,2.53673742215138,2.20689201748667,1.32878813789265,1.75400245523236,1.14704320301017,1.38147985492716,0.578596234326046,0,0.54390568381871,0,0.827810238914197,990.276039044701,782.505219689548,0,37.6181681534516,7.57219726599016,8.98009111882268,11.4174400798383,6.21318874676635,13.1451217708613,11.889214293131,5.66734982344852,9.9366991689846,7.90575555893047,752.855844376294,56.9179741685157,8.72521457969551,2.11753047159649,24.5805483229078,3.98235415019888,1.94224508923985,4.23252979750651,7.73280826999182,16.5369060013233,7.07100840271033,1.55056975900933,10.1789444253702,8.91243445961803,6.0046984007805,4.21674434299995,3.09406629744561,75.2371528715871,37.9928908406065,54.8480819238879,30.0071849044229,20.5714671025037,27.4687979107189,44.921882624379,101.995757953391,35.4354279176203,6.35496212591461,71.0101441736977,5.27636009412736,2.74489525383039,1.20625849856312,1.43246812803764,1.64140899745061,9.03590593552537,952.344351125978,0,1.857481811669,0.370389054739423,0,0.136694227721025,0,0,0.279902904647316,0.138199973804424,13.3653886522116,5.852215881251,2.84647253977588,2.26811215725783,1.88179466413022,3.27543845619266,2.42755823492677,4.79390043206948,7.59092231753686,7.2584385043404,1.86401793926078,14.6560164057889,71.7679421011098,64.363352787811,36.751274597025,64.7090715623433,56.7692581649015,49.9941836630912,40.2331549167806,104.020469670305,15.4613837328644,15.8416503441826,4.4241556887945,1.41907650703115,1.64337531463724,2.20865399062252,2.32734704367726,2.98022032171897,1.68273629327956,2.21534290761866,1.41353029927407,0.990688486514998,0.806609481094724,1.8516997340553,1.53938946624527,2.22066114144981,23.8066902795972,0,0,0.167884616364078,10.0458588896739,16.3283753642528,6.41030684935428,1.71494703263253,217.682293151348,643.252348740839,745.266557905119,647.944825699958,540.993818017929,937.877969566009,943.486977839736,914.655487814097,723.215852378098,779.404943452832,833.59410192043,5.91587881229807,15.9609949360412,29.8783810069735,25.7693120092392,50.0975458680878,59.9329837547046,42.4491250101085,37.2923453602398,26.9572136057125,43.9693148469008,35.994060584414,36.5935102288988,35.7710558534951,31.2442743735762,31.3597660497648,37.6272016113628,28.855197160269,33.1803859197573,27.6097553538215,36.9469289537337,41.8300487910207,38.5122499365762,34.3348113524142,26.5983942437161,30.3973298741518,30.1228004094368,34.573386872954,37.0928293127358,33.2720078922361,46.0136662759345,31.7941848572787,28.664804371289,38.4677180579508,30.3676208724493,36.845162697398,103.42157926631,41.4058946948373,53.7177635120746,78.8107928123635,67.9421570888108,91.1240593988256|short_description=p1@Mt3}} | ||
|EntrezGene=17751 | |||
|HGNC= | |||
|MCL_coexpression_id=176 | |||
|UniProt=P28184,Q3USP9 | |||
|association_with_transcript=128bp_to_ENSMUST00000034211,NM_013603,uc009mvu.2_5end | |||
|description=CAGE_peak_1_at_Mt3_5end | |||
|id=chr8:96676635..96676651,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.60e-15!44;CL:0000133!1.60e-15!44;CL:0002319!4.42e-15!43;CL:0000117!3.18e-11!23;CL:0000337!3.18e-11!23;CL:0000055!2.43e-10!50;CL:0000540!2.30e-09!33;CL:0000047!2.30e-09!33;CL:0000031!2.30e-09!33;CL:0000404!2.30e-09!33;CL:0000333!2.27e-07!10;CL:0000095!2.27e-07!10;CL:0000243!2.27e-07!10;CL:0000123!2.27e-07!10;CL:0000125!2.27e-07!10;CL:0000030!2.27e-07!10;CL:0000339!2.27e-07!10;CL:0002453!9.40e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.08e-15,44;CL:0000133,1.08e-15,44;CL:0002319,3.03e-15,43;CL:0000117,2.43e-11,23;CL:0000337,2.43e-11,23;CL:0000540,1.85e-09,33;CL:0000047,1.85e-09,33;CL:0000031,1.85e-09,33;CL:0000404,1.85e-09,33;CL:0000333,1.93e-07,10;CL:0000095,1.93e-07,10;CL:0000243,1.93e-07,10;CL:0000123,1.93e-07,10;CL:0000125,1.93e-07,10;CL:0000030,1.93e-07,10;CL:0000339,1.93e-07,10;CL:0002453,8.12e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.76e-32!75;UBERON:0001016!6.76e-32!75;UBERON:0001017!6.28e-31!73;UBERON:0005743!6.28e-31!73;UBERON:0001049!6.26e-26!52;UBERON:0005068!6.26e-26!52;UBERON:0006241!6.26e-26!52;UBERON:0007135!6.26e-26!52;UBERON:0000955!3.70e-25!50;UBERON:0006238!3.70e-25!50;UBERON:0004121!1.52e-24!102;UBERON:0000924!1.52e-24!102;UBERON:0006601!1.52e-24!102;UBERON:0002616!1.63e-24!49;UBERON:0000033!5.03e-23!63;UBERON:0002346!8.36e-22!71;UBERON:0003075!8.36e-22!71;UBERON:0007284!8.36e-22!71;UBERON:0003080!1.07e-18!40;UBERON:0002020!2.65e-18!34;UBERON:0002780!4.26e-18!39;UBERON:0001890!4.26e-18!39;UBERON:0006240!4.26e-18!39;UBERON:0003056!6.24e-17!49;UBERON:0002791!7.53e-16!29;UBERON:0003528!7.53e-16!29;UBERON:0001893!7.53e-16!29;UBERON:0000956!3.38e-12!21;UBERON:0001869!3.38e-12!21;UBERON:0000203!3.38e-12!21;UBERON:0002619!1.34e-10!17;UBERON:0007811!6.60e-10!86;UBERON:0003076!8.67e-08!12;UBERON:0003057!8.67e-08!12;UBERON:0000153!1.14e-07!94;UBERON:0004111!2.44e-07!122;UBERON:0002021!5.49e-07!10;UBERON:0000411!5.49e-07!10;UBERON:0001950!5.49e-07!10;UBERON:0000479!6.61e-07!349 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.88e-32,75;UBERON:0001017,2.75e-31,73;UBERON:0000073,1.51e-27,54;UBERON:0001049,3.16e-26,52;UBERON:0005068,3.16e-26,52;UBERON:0006241,3.16e-26,52;UBERON:0007135,3.16e-26,52;UBERON:0004121,8.30e-26,95;UBERON:0000924,8.30e-26,95;UBERON:0006601,8.30e-26,95;UBERON:0002346,9.22e-24,64;UBERON:0003075,9.22e-24,64;UBERON:0007284,9.22e-24,64;UBERON:0010314,1.22e-23,92;UBERON:0000955,1.90e-23,47;UBERON:0006238,1.90e-23,47;UBERON:0002616,8.26e-23,46;UBERON:0010371,1.05e-19,73;UBERON:0003080,6.64e-19,40;UBERON:0002020,1.66e-18,34;UBERON:0002780,2.68e-18,39;UBERON:0001890,2.68e-18,39;UBERON:0006240,2.68e-18,39;UBERON:0003056,4.06e-17,49;UBERON:0003528,5.05e-16,29;UBERON:0002791,5.05e-16,29;UBERON:0001893,5.05e-16,29;UBERON:0000956,2.51e-12,21;UBERON:0001869,2.51e-12,21;UBERON:0000203,2.51e-12,21;UBERON:0002619,1.04e-10,17;UBERON:0003076,7.28e-08,12;UBERON:0003057,7.28e-08,12;UBERON:0004111,2.47e-07,122;UBERON:0002021,4.71e-07,10;UBERON:0000411,4.71e-07,10;UBERON:0001950,4.71e-07,10 | |||
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| |||
|short_description=p1@Mt3 | |||
}} |
Revision as of 16:30, 14 September 2013
Short description: | p1@Mt3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mt3_5end |
Coexpression cluster: | MCL_coexpression_mm9:176 |
Association with transcript: | 128bp_to_ENSMUST00000034211, NM_013603, uc009mvu.2_5end |
EntrezGene: | Mt3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.08e-15 | 44 |
neurectodermal cell | 1.08e-15 | 44 |
neural cell | 3.03e-15 | 43 |
CNS neuron (sensu Vertebrata) | 2.43e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.43e-11 | 23 |
neuron | 1.85e-09 | 33 |
neuronal stem cell | 1.85e-09 | 33 |
neuroblast | 1.85e-09 | 33 |
electrically signaling cell | 1.85e-09 | 33 |
migratory neural crest cell | 1.93e-07 | 10 |
neuron associated cell | 1.93e-07 | 10 |
glial cell (sensu Vertebrata) | 1.93e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 1.93e-07 | 10 |
glial cell | 1.93e-07 | 10 |
glioblast | 1.93e-07 | 10 |
glioblast (sensu Vertebrata) | 1.93e-07 | 10 |
oligodendrocyte precursor cell | 8.12e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.