FFCP PHASE1:Mm9::chr9:20780356..20780371,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=807|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:20780356..20780371,+|id=chr9:20780356..20780371,+|ontology_enrichment_celltype=CL:0000791!1.55e-18!9;CL:0000789!1.55e-18!9;CL:0002420!1.55e-18!9;CL:0002419!1.55e-18!9;CL:0000790!1.55e-18!9;CL:0000624!1.01e-16!8;CL:0000838!1.75e-16!12;CL:0000542!5.02e-15!13;CL:0000051!5.02e-15!13;CL:0000084!8.86e-15!11;CL:0000827!8.86e-15!11;CL:0000988!2.47e-13!32;CL:0002032!2.47e-13!32;CL:0000037!2.47e-13!32;CL:0000566!2.47e-13!32;CL:0000837!2.47e-13!32;CL:0000893!5.19e-13!6;CL:0002489!5.19e-13!6;CL:0000898!5.19e-13!6;CL:0000809!5.19e-13!6;CL:0000810!5.19e-13!6;CL:0000895!5.19e-13!6;CL:0000808!5.19e-13!6;CL:0000894!5.19e-13!6;CL:0000806!5.19e-13!6;CL:0000807!5.19e-13!6;CL:0000805!5.19e-13!6;CL:0002425!5.19e-13!6;CL:0002436!5.19e-13!6;CL:0002427!5.19e-13!6;CL:0002428!5.19e-13!6;CL:0002429!5.19e-13!6;CL:0002433!5.19e-13!6;CL:0002431!5.19e-13!6;CL:0002432!5.19e-13!6;CL:0000738!6.44e-11!17;CL:0002087!6.44e-11!17;CL:0000034!1.05e-10!97;CL:0000144!1.65e-09!121;CL:0000012!1.65e-09!121;CL:0002320!2.79e-09!46;CL:0000134!2.79e-09!46;CL:0000063!1.05e-07!66;CL:0000548!1.21e-07!115;CL:0000004!1.21e-07!115;CL:0000255!1.21e-07!115;CL:0002371!2.85e-07!118;CL:0000219!2.87e-07!54;CL:0000723!4.87e-07!91;CL:0000048!4.87e-07!91|ontology_enrichment_celltype_v019_2=CL:0000791,1.93e-27,9;CL:0000789,1.93e-27,9;CL:0002420,1.93e-27,9;CL:0002419,1.93e-27,9;CL:0000790,1.93e-27,9;CL:0000084,1.99e-22,11;CL:0000827,1.99e-22,11;CL:0000624,5.25e-22,8;CL:0000838,1.52e-20,12;CL:0000893,3.04e-19,6;CL:0002489,3.04e-19,6;CL:0000898,3.04e-19,6;CL:0000809,3.04e-19,6;CL:0000810,3.04e-19,6;CL:0000895,3.04e-19,6;CL:0000808,3.04e-19,6;CL:0000894,3.04e-19,6;CL:0000806,3.04e-19,6;CL:0000807,3.04e-19,6;CL:0000805,3.04e-19,6;CL:0002425,3.04e-19,6;CL:0002436,3.04e-19,6;CL:0002427,3.04e-19,6;CL:0002428,3.04e-19,6;CL:0002429,3.04e-19,6;CL:0002433,3.04e-19,6;CL:0002431,3.04e-19,6;CL:0002432,3.04e-19,6;CL:0000542,5.96e-19,13;CL:0000051,5.96e-19,13;CL:0000988,1.84e-16,32;CL:0002032,1.84e-16,32;CL:0000037,1.84e-16,32;CL:0000837,1.84e-16,32;CL:0000738,1.92e-14,17;CL:0002087,1.92e-14,17;CL:0002320,7.39e-14,46;CL:0000134,7.39e-14,46;CL:0000219,1.17e-11,54;CL:0000034,1.06e-10,97;CL:0002031,9.85e-10,25;CL:0000815,4.10e-08,1;CL:0000792,4.10e-08,1;CL:0000213,5.62e-08,1;CL:0002078,5.62e-08,1;CL:0000115,5.62e-08,1;CL:0002262,5.62e-08,1;CL:1000398,5.62e-08,1;CL:0000625,1.05e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!2.79e-09!46;UBERON:0003081!2.39e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.39e-14,46;UBERON:0002394,5.62e-08,1;UBERON:0001281,5.62e-08,1;UBERON:0000353,5.62e-08,1;UBERON:0003497,5.62e-08,1;UBERON:0003909,5.62e-08,1;UBERON:0003928,5.62e-08,1;UBERON:0003835,5.62e-08,1;UBERON:0003513,5.62e-08,1;UBERON:0001280,5.62e-08,1;UBERON:0004647,5.62e-08,1;UBERON:0002294,5.62e-08,1;UBERON:0001173,5.62e-08,1;UBERON:0004912,5.62e-08,1;UBERON:0005171,5.62e-08,1|phase1_expression=0,0,0.454999239389536,0,0,0.33575854382378,0,1.54947988129892,3.23814060948833,3.7450324211519,3.5955773327356,2.79202556483677,0.513602189793617,0.699363219351979,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0.183546752161682,0,0,0,0,0,0,0.671130424230945,0.725362142011344,1.00828139742739,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0,0,1.43778149407104,0.599902730993408,1.14363204365758,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.54408744268829,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0.668396022247182,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0.16488625294148,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0.228778173206523,1.86976272993241,1.11961161858926,1.65839968565309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0,0,0.179427713218951,0.503653849092235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p@chr9:20780356..20780371,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=807 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:20780356..20780371,+ | |||
|id=chr9:20780356..20780371,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.55e-18!9;CL:0000789!1.55e-18!9;CL:0002420!1.55e-18!9;CL:0002419!1.55e-18!9;CL:0000790!1.55e-18!9;CL:0000624!1.01e-16!8;CL:0000838!1.75e-16!12;CL:0000542!5.02e-15!13;CL:0000051!5.02e-15!13;CL:0000084!8.86e-15!11;CL:0000827!8.86e-15!11;CL:0000988!2.47e-13!32;CL:0002032!2.47e-13!32;CL:0000037!2.47e-13!32;CL:0000566!2.47e-13!32;CL:0000837!2.47e-13!32;CL:0000893!5.19e-13!6;CL:0002489!5.19e-13!6;CL:0000898!5.19e-13!6;CL:0000809!5.19e-13!6;CL:0000810!5.19e-13!6;CL:0000895!5.19e-13!6;CL:0000808!5.19e-13!6;CL:0000894!5.19e-13!6;CL:0000806!5.19e-13!6;CL:0000807!5.19e-13!6;CL:0000805!5.19e-13!6;CL:0002425!5.19e-13!6;CL:0002436!5.19e-13!6;CL:0002427!5.19e-13!6;CL:0002428!5.19e-13!6;CL:0002429!5.19e-13!6;CL:0002433!5.19e-13!6;CL:0002431!5.19e-13!6;CL:0002432!5.19e-13!6;CL:0000738!6.44e-11!17;CL:0002087!6.44e-11!17;CL:0000034!1.05e-10!97;CL:0000144!1.65e-09!121;CL:0000012!1.65e-09!121;CL:0002320!2.79e-09!46;CL:0000134!2.79e-09!46;CL:0000063!1.05e-07!66;CL:0000548!1.21e-07!115;CL:0000004!1.21e-07!115;CL:0000255!1.21e-07!115;CL:0002371!2.85e-07!118;CL:0000219!2.87e-07!54;CL:0000723!4.87e-07!91;CL:0000048!4.87e-07!91 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.93e-27,9;CL:0000789,1.93e-27,9;CL:0002420,1.93e-27,9;CL:0002419,1.93e-27,9;CL:0000790,1.93e-27,9;CL:0000084,1.99e-22,11;CL:0000827,1.99e-22,11;CL:0000624,5.25e-22,8;CL:0000838,1.52e-20,12;CL:0000893,3.04e-19,6;CL:0002489,3.04e-19,6;CL:0000898,3.04e-19,6;CL:0000809,3.04e-19,6;CL:0000810,3.04e-19,6;CL:0000895,3.04e-19,6;CL:0000808,3.04e-19,6;CL:0000894,3.04e-19,6;CL:0000806,3.04e-19,6;CL:0000807,3.04e-19,6;CL:0000805,3.04e-19,6;CL:0002425,3.04e-19,6;CL:0002436,3.04e-19,6;CL:0002427,3.04e-19,6;CL:0002428,3.04e-19,6;CL:0002429,3.04e-19,6;CL:0002433,3.04e-19,6;CL:0002431,3.04e-19,6;CL:0002432,3.04e-19,6;CL:0000542,5.96e-19,13;CL:0000051,5.96e-19,13;CL:0000988,1.84e-16,32;CL:0002032,1.84e-16,32;CL:0000037,1.84e-16,32;CL:0000837,1.84e-16,32;CL:0000738,1.92e-14,17;CL:0002087,1.92e-14,17;CL:0002320,7.39e-14,46;CL:0000134,7.39e-14,46;CL:0000219,1.17e-11,54;CL:0000034,1.06e-10,97;CL:0002031,9.85e-10,25;CL:0000815,4.10e-08,1;CL:0000792,4.10e-08,1;CL:0000213,5.62e-08,1;CL:0002078,5.62e-08,1;CL:0000115,5.62e-08,1;CL:0002262,5.62e-08,1;CL:1000398,5.62e-08,1;CL:0000625,1.05e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.79e-09!46;UBERON:0003081!2.39e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.39e-14,46;UBERON:0002394,5.62e-08,1;UBERON:0001281,5.62e-08,1;UBERON:0000353,5.62e-08,1;UBERON:0003497,5.62e-08,1;UBERON:0003909,5.62e-08,1;UBERON:0003928,5.62e-08,1;UBERON:0003835,5.62e-08,1;UBERON:0003513,5.62e-08,1;UBERON:0001280,5.62e-08,1;UBERON:0004647,5.62e-08,1;UBERON:0002294,5.62e-08,1;UBERON:0001173,5.62e-08,1;UBERON:0004912,5.62e-08,1;UBERON:0005171,5.62e-08,1 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0.33575854382378,0,1.54947988129892,3.23814060948833,3.7450324211519,3.5955773327356,2.79202556483677,0.513602189793617,0.699363219351979,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0.183546752161682,0,0,0,0,0,0,0.671130424230945,0.725362142011344,1.00828139742739,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44932244350839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150722640552623,0,0,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0,0,1.43778149407104,0.599902730993408,1.14363204365758,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.54408744268829,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0.668396022247182,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0.16488625294148,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0.228778173206523,1.86976272993241,1.11961161858926,1.65839968565309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0,0,0.179427713218951,0.503653849092235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:20780356..20780371,+ | |||
}} |
Revision as of 17:24, 14 September 2013
Short description: | p@chr9:20780356..20780371, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:20780356..20780371, + |
Coexpression cluster: | MCL_coexpression_mm9:807 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 7.39e-14 | 46 |
bile duct | 5.62e-08 | 1 |
hepatic sinusoid | 5.62e-08 | 1 |
parenchyma | 5.62e-08 | 1 |
abdomen blood vessel | 5.62e-08 | 1 |
sinusoid | 5.62e-08 | 1 |
digestive system duct | 5.62e-08 | 1 |
abdominal segment blood vessel | 5.62e-08 | 1 |
trunk blood vessel | 5.62e-08 | 1 |
liver parenchyma | 5.62e-08 | 1 |
liver lobule | 5.62e-08 | 1 |
biliary system | 5.62e-08 | 1 |
biliary tree | 5.62e-08 | 1 |
biliary bud | 5.62e-08 | 1 |
hepatic duct | 5.62e-08 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.