FFCP PHASE1:Mm9::chr9:44376192..44376237,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:44376192..44376237,-|id=chr9:44376192..44376237,-|ontology_enrichment_celltype=CL:0000988!1.64e-17!32;CL:0002032!1.64e-17!32;CL:0000037!1.64e-17!32;CL:0000566!1.64e-17!32;CL:0000837!1.64e-17!32;CL:0000838!9.35e-16!12;CL:0000084!2.56e-14!11;CL:0000827!2.56e-14!11;CL:0000542!2.81e-14!13;CL:0000051!2.81e-14!13;CL:0002031!7.66e-14!25;CL:0000738!3.31e-12!17;CL:0002087!3.31e-12!17;CL:0000791!4.45e-12!9;CL:0000789!4.45e-12!9;CL:0002420!4.45e-12!9;CL:0002419!4.45e-12!9;CL:0000790!4.45e-12!9;CL:0000624!9.23e-11!8;CL:0002320!3.72e-10!46;CL:0000134!3.72e-10!46;CL:0000219!1.72e-08!54;CL:0000893!4.63e-08!6;CL:0002489!4.63e-08!6;CL:0000898!4.63e-08!6;CL:0000809!4.63e-08!6;CL:0000810!4.63e-08!6;CL:0000895!4.63e-08!6;CL:0000808!4.63e-08!6;CL:0000894!4.63e-08!6;CL:0000806!4.63e-08!6;CL:0000807!4.63e-08!6;CL:0000805!4.63e-08!6;CL:0002425!4.63e-08!6;CL:0002436!4.63e-08!6;CL:0002427!4.63e-08!6;CL:0002428!4.63e-08!6;CL:0002429!4.63e-08!6;CL:0002433!4.63e-08!6;CL:0002431!4.63e-08!6;CL:0002432!4.63e-08!6|ontology_enrichment_celltype_v019_2=CL:0002031,8.35e-20,25;CL:0000988,3.45e-15,32;CL:0002032,3.45e-15,32;CL:0000037,3.45e-15,32;CL:0000837,3.45e-15,32;CL:0000553,2.83e-14,6;CL:0000556,2.83e-14,6;CL:0000838,4.61e-11,12;CL:0000738,7.37e-11,17;CL:0002087,7.37e-11,17;CL:0000542,3.35e-10,13;CL:0000051,3.35e-10,13;CL:0002320,3.72e-10,46;CL:0000134,3.72e-10,46;CL:0000839,5.71e-10,13;CL:0000791,9.63e-10,9;CL:0000789,9.63e-10,9;CL:0002420,9.63e-10,9;CL:0002419,9.63e-10,9;CL:0000790,9.63e-10,9;CL:0000050,1.38e-09,9;CL:0000219,1.91e-08,54;CL:0000763,4.49e-08,16;CL:0000084,5.34e-08,11;CL:0000827,5.34e-08,11;CL:0000034,2.73e-07,97;CL:0000815,6.50e-07,1;CL:0000792,6.50e-07,1;CL:0000049,8.97e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!3.72e-10!46;UBERON:0002193!2.58e-09!48;UBERON:0002390!4.04e-09!45;UBERON:0003061!4.04e-09!45|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.72e-10,46;UBERON:0002371,4.49e-08,16|phase1_expression=0,0,0,0,0,0,0,5.68142623142936,0.985521055061667,0.234064526321993,0.171217968225505,0.0797721589953364,2.39681021903688,2.18551006047494,0,1.41732687172878,0,2.83915948822414,1.7824876368746,2.12194825899015,0.0850432901510698,0.794327609607082,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,3.906676722619,0.523523743973798,27.6468799374577,1.36609096991689,1.94204141212461,0,0,0,0,0,0,0,0,0,2.18117387875057,0.725362142011344,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.55362730188303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599075622529601,0.599902730993408,0.508280908292259,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0.335012514883631,0.238043640886014,0,0.315270288212382,0,0,0.491589944147214,0,0.433947175744535,1.50791283939272,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0.512612642393558,0,0,0.188368457004691,0.136694227721025,0.228778173206523,1.18984900995699,0.979660166265606,1.10559979043539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0.39736270956253,0,0,0.100966449948148,0,0.201652370273681,0.0974578807397524,0,0.233753804363138,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.128050304809739,0,0,0.115884325944855,0,0,0.294397840268795,0.342869252385415,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr9:44376192..44376237,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:44376192..44376237,- | |||
|id=chr9:44376192..44376237,- | |||
|ontology_enrichment_celltype=CL:0000988!1.64e-17!32;CL:0002032!1.64e-17!32;CL:0000037!1.64e-17!32;CL:0000566!1.64e-17!32;CL:0000837!1.64e-17!32;CL:0000838!9.35e-16!12;CL:0000084!2.56e-14!11;CL:0000827!2.56e-14!11;CL:0000542!2.81e-14!13;CL:0000051!2.81e-14!13;CL:0002031!7.66e-14!25;CL:0000738!3.31e-12!17;CL:0002087!3.31e-12!17;CL:0000791!4.45e-12!9;CL:0000789!4.45e-12!9;CL:0002420!4.45e-12!9;CL:0002419!4.45e-12!9;CL:0000790!4.45e-12!9;CL:0000624!9.23e-11!8;CL:0002320!3.72e-10!46;CL:0000134!3.72e-10!46;CL:0000219!1.72e-08!54;CL:0000893!4.63e-08!6;CL:0002489!4.63e-08!6;CL:0000898!4.63e-08!6;CL:0000809!4.63e-08!6;CL:0000810!4.63e-08!6;CL:0000895!4.63e-08!6;CL:0000808!4.63e-08!6;CL:0000894!4.63e-08!6;CL:0000806!4.63e-08!6;CL:0000807!4.63e-08!6;CL:0000805!4.63e-08!6;CL:0002425!4.63e-08!6;CL:0002436!4.63e-08!6;CL:0002427!4.63e-08!6;CL:0002428!4.63e-08!6;CL:0002429!4.63e-08!6;CL:0002433!4.63e-08!6;CL:0002431!4.63e-08!6;CL:0002432!4.63e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,8.35e-20,25;CL:0000988,3.45e-15,32;CL:0002032,3.45e-15,32;CL:0000037,3.45e-15,32;CL:0000837,3.45e-15,32;CL:0000553,2.83e-14,6;CL:0000556,2.83e-14,6;CL:0000838,4.61e-11,12;CL:0000738,7.37e-11,17;CL:0002087,7.37e-11,17;CL:0000542,3.35e-10,13;CL:0000051,3.35e-10,13;CL:0002320,3.72e-10,46;CL:0000134,3.72e-10,46;CL:0000839,5.71e-10,13;CL:0000791,9.63e-10,9;CL:0000789,9.63e-10,9;CL:0002420,9.63e-10,9;CL:0002419,9.63e-10,9;CL:0000790,9.63e-10,9;CL:0000050,1.38e-09,9;CL:0000219,1.91e-08,54;CL:0000763,4.49e-08,16;CL:0000084,5.34e-08,11;CL:0000827,5.34e-08,11;CL:0000034,2.73e-07,97;CL:0000815,6.50e-07,1;CL:0000792,6.50e-07,1;CL:0000049,8.97e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.72e-10!46;UBERON:0002193!2.58e-09!48;UBERON:0002390!4.04e-09!45;UBERON:0003061!4.04e-09!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.72e-10,46;UBERON:0002371,4.49e-08,16 | |||
|phase1_expression=0,0,0,0,0,0,0,5.68142623142936,0.985521055061667,0.234064526321993,0.171217968225505,0.0797721589953364,2.39681021903688,2.18551006047494,0,1.41732687172878,0,2.83915948822414,1.7824876368746,2.12194825899015,0.0850432901510698,0.794327609607082,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,3.906676722619,0.523523743973798,27.6468799374577,1.36609096991689,1.94204141212461,0,0,0,0,0,0,0,0,0,2.18117387875057,0.725362142011344,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.55362730188303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599075622529601,0.599902730993408,0.508280908292259,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0.335012514883631,0.238043640886014,0,0.315270288212382,0,0,0.491589944147214,0,0.433947175744535,1.50791283939272,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0.512612642393558,0,0,0.188368457004691,0.136694227721025,0.228778173206523,1.18984900995699,0.979660166265606,1.10559979043539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0.39736270956253,0,0,0.100966449948148,0,0.201652370273681,0.0974578807397524,0,0.233753804363138,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.128050304809739,0,0,0.115884325944855,0,0,0.294397840268795,0.342869252385415,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:44376192..44376237,- | |||
}} |
Revision as of 17:56, 14 September 2013
Short description: | p@chr9:44376192..44376237, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:44376192..44376237, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 8.35e-20 | 25 |
hematopoietic cell | 3.45e-15 | 32 |
hematopoietic oligopotent progenitor cell | 3.45e-15 | 32 |
hematopoietic stem cell | 3.45e-15 | 32 |
hematopoietic multipotent progenitor cell | 3.45e-15 | 32 |
megakaryocyte progenitor cell | 2.83e-14 | 6 |
megakaryocyte | 2.83e-14 | 6 |
lymphoid lineage restricted progenitor cell | 4.61e-11 | 12 |
leukocyte | 7.37e-11 | 17 |
nongranular leukocyte | 7.37e-11 | 17 |
lymphocyte | 3.35e-10 | 13 |
common lymphoid progenitor | 3.35e-10 | 13 |
connective tissue cell | 3.72e-10 | 46 |
mesenchymal cell | 3.72e-10 | 46 |
myeloid lineage restricted progenitor cell | 5.71e-10 | 13 |
mature alpha-beta T cell | 9.63e-10 | 9 |
alpha-beta T cell | 9.63e-10 | 9 |
immature T cell | 9.63e-10 | 9 |
mature T cell | 9.63e-10 | 9 |
immature alpha-beta T cell | 9.63e-10 | 9 |
megakaryocyte-erythroid progenitor cell | 1.38e-09 | 9 |
motile cell | 1.91e-08 | 54 |
myeloid cell | 4.49e-08 | 16 |
T cell | 5.34e-08 | 11 |
pro-T cell | 5.34e-08 | 11 |
stem cell | 2.73e-07 | 97 |
regulatory T cell | 6.50e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 6.50e-07 | 1 |
common myeloid progenitor | 8.97e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.72e-10 | 46 |
bone marrow | 4.49e-08 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.