FFCP PHASE1:Mm9::chr9:91273412..91273420,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=22774|HGNC=|MCL_coexpression_id=141|UniProt=Q61467|association_with_transcript=-59bp_to_ENSMUST00000066384_5end|description=CAGE_peak_7_at_Zic4_5end|id=chr9:91273412..91273420,+|ontology_enrichment_celltype=CL:0000117!6.00e-11!23;CL:0000337!6.00e-11!23;CL:0002319!2.02e-09!43;CL:0000221!4.24e-09!44;CL:0000133!4.24e-09!44;CL:0000055!1.86e-07!50;CL:0002613!4.28e-07!3;CL:0000120!7.49e-07!3|ontology_enrichment_celltype_v019_2=CL:0002613,3.67e-34,3;CL:0000120,9.86e-33,3;CL:0000117,2.53e-23,23;CL:0000337,2.53e-23,23;CL:0000540,2.74e-16,33;CL:0000047,2.74e-16,33;CL:0000031,2.74e-16,33;CL:0000404,2.74e-16,33;CL:0002319,2.91e-16,43;CL:0000221,6.80e-16,44;CL:0000133,6.80e-16,44;CL:0000393,8.64e-14,39;CL:0000211,8.64e-14,39;CL:0002321,5.63e-10,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.77e-08!73;UBERON:0005743!3.77e-08!73;UBERON:0000073!9.00e-08!75;UBERON:0001016!9.00e-08!75|ontology_enrichment_uberon_v019_2=UBERON:0000369,7.72e-21,5;UBERON:0002435,7.72e-21,5;UBERON:0000204,7.72e-21,5;UBERON:0010082,7.72e-21,5;UBERON:0002420,2.64e-13,8;UBERON:0007245,2.64e-13,8;UBERON:0010009,2.64e-13,8;UBERON:0010011,2.64e-13,8;UBERON:0000454,2.64e-13,8;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0,0,0,1.01158230429799,1.05798195854407,1.90149421051854,0.338844532069132,0.889294796111139,0,0,0,0.599200221036809,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.127687338085188,0,6.59431438650969,6.31264740856627,2.6045668527838,0.279182999001381,0,0.61119299110724,0.294628585473668,0,1.4911955666024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.209446706813455,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0.130120442962704,0.229902104433473,0,0,0.136072998302656,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388076051348264,0.214337035031592,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.512200817262403,0.243106717068294,0.628839487883947,0,0.44449345560323,0.206035057238894,0.64183841918363,0,0,0,0.0936415074698824,0,0.114870937911227,0,0.347652977834566,0.38581844092741,0,0,0,0,0,0.436039249896986,0.376437521661322,0.169229215783353,0.182927972872773,0.263069711437843,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0,0.385813221962283,0.999242311751784,0.233931608445408,0,0,0,0|short_description=p7@Zic4}} | ||
|EntrezGene=22774 | |||
|HGNC= | |||
|MCL_coexpression_id=141 | |||
|UniProt=Q61467 | |||
|association_with_transcript=-59bp_to_ENSMUST00000066384_5end | |||
|description=CAGE_peak_7_at_Zic4_5end | |||
|id=chr9:91273412..91273420,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.00e-11!23;CL:0000337!6.00e-11!23;CL:0002319!2.02e-09!43;CL:0000221!4.24e-09!44;CL:0000133!4.24e-09!44;CL:0000055!1.86e-07!50;CL:0002613!4.28e-07!3;CL:0000120!7.49e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,3.67e-34,3;CL:0000120,9.86e-33,3;CL:0000117,2.53e-23,23;CL:0000337,2.53e-23,23;CL:0000540,2.74e-16,33;CL:0000047,2.74e-16,33;CL:0000031,2.74e-16,33;CL:0000404,2.74e-16,33;CL:0002319,2.91e-16,43;CL:0000221,6.80e-16,44;CL:0000133,6.80e-16,44;CL:0000393,8.64e-14,39;CL:0000211,8.64e-14,39;CL:0002321,5.63e-10,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.77e-08!73;UBERON:0005743!3.77e-08!73;UBERON:0000073!9.00e-08!75;UBERON:0001016!9.00e-08!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,7.72e-21,5;UBERON:0002435,7.72e-21,5;UBERON:0000204,7.72e-21,5;UBERON:0010082,7.72e-21,5;UBERON:0002420,2.64e-13,8;UBERON:0007245,2.64e-13,8;UBERON:0010009,2.64e-13,8;UBERON:0010011,2.64e-13,8;UBERON:0000454,2.64e-13,8;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0,0,0,1.01158230429799,1.05798195854407,1.90149421051854,0.338844532069132,0.889294796111139,0,0,0,0.599200221036809,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.127687338085188,0,6.59431438650969,6.31264740856627,2.6045668527838,0.279182999001381,0,0.61119299110724,0.294628585473668,0,1.4911955666024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.209446706813455,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0.130120442962704,0.229902104433473,0,0,0.136072998302656,0,0.0937017245597288,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388076051348264,0.214337035031592,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.512200817262403,0.243106717068294,0.628839487883947,0,0.44449345560323,0.206035057238894,0.64183841918363,0,0,0,0.0936415074698824,0,0.114870937911227,0,0.347652977834566,0.38581844092741,0,0,0,0,0,0.436039249896986,0.376437521661322,0.169229215783353,0.182927972872773,0.263069711437843,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0,0.385813221962283,0.999242311751784,0.233931608445408,0,0,0,0 | |||
|short_description=p7@Zic4 | |||
}} |
Revision as of 18:58, 14 September 2013
Short description: | p7@Zic4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Zic4_5end |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | -59bp_to_ENSMUST00000066384_5end |
EntrezGene: | Zic4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 3.67e-34 | 3 |
granule cell | 9.86e-33 | 3 |
CNS neuron (sensu Vertebrata) | 2.53e-23 | 23 |
neuroblast (sensu Vertebrata) | 2.53e-23 | 23 |
neuron | 2.74e-16 | 33 |
neuronal stem cell | 2.74e-16 | 33 |
neuroblast | 2.74e-16 | 33 |
electrically signaling cell | 2.74e-16 | 33 |
neural cell | 2.91e-16 | 43 |
ectodermal cell | 6.80e-16 | 44 |
neurectodermal cell | 6.80e-16 | 44 |
electrically responsive cell | 8.64e-14 | 39 |
electrically active cell | 8.64e-14 | 39 |
embryonic cell | 5.63e-10 | 70 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 7.72e-21 | 5 |
striatum | 7.72e-21 | 5 |
ventral part of telencephalon | 7.72e-21 | 5 |
future corpus striatum | 7.72e-21 | 5 |
basal ganglion | 2.64e-13 | 8 |
nuclear complex of neuraxis | 2.64e-13 | 8 |
aggregate regional part of brain | 2.64e-13 | 8 |
collection of basal ganglia | 2.64e-13 | 8 |
cerebral subcortex | 2.64e-13 | 8 |
central nervous system | 1.46e-09 | 73 |
nervous system | 2.65e-09 | 75 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.