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FFCP PHASE1:Mm9::chrX:6154377..6154412,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=208431|HGNC=|MCL_coexpression_id=94|UniProt=Q1W617|association_with_transcript=0bp_to_ENSMUST00000089520,uc009skz.1_5end|description=CAGE_peak_2_at_Shroom4_5end|id=chrX:6154377..6154412,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!3.37e-09!333;UBERON:0002048!8.48e-09!14;UBERON:0000117!8.48e-09!14;UBERON:0000171!8.48e-09!14;UBERON:0000170!8.48e-09!14;UBERON:0005597!8.48e-09!14;UBERON:0000118!8.48e-09!14;UBERON:0005153!1.76e-08!17;UBERON:0003103!5.72e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.90e-09,14;UBERON:0000117,2.90e-09,14;UBERON:0000171,2.90e-09,14;UBERON:0000170,2.90e-09,14;UBERON:0005597,2.90e-09,14;UBERON:0000118,2.90e-09,14;UBERON:0005153,9.77e-09,17;UBERON:0003103,4.72e-07,43|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,1.14613375975503,0,0.404632921719196,1.05798195854407,0,0,0,0,0,0,0,0,0.622137673850866,0.270011876663381,0.841299845405528,0.856952953211411,0.662605622854841,0.367472397644862,0.383381884072945,0,1.10115880999389,2.55374676170375,1.53606533256243,0.791317726381163,1.28082701043374,0,0.837548997004143,3.37657566019008,1.98637722109853,0.589257170947335,1.42371680799103,1.1183966749518,0.151452386666368,0,11.8844440367688,2.58127163094416,0,0,0,0.896053774194671,1.12355536105401,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,2.84831672011889,2.9688427812965,0.693941307064543,1.82679286987285,2.30615497256059,1.50722640552623,1.88141931417128,2.01066546127481,1.73036477414062,9.10975948595443,1.76922110389975,3.558870698843,3.97514733228708,2.90925151881133,0,1.75668478206928,1.8850203613211,0.255457055208591,0.11981512450592,0,0,2.99581278809645,3.66000482254901,1.13088916901578,2.08589184230732,3.3243009452943,3.1168206683934,2.10913641988085,2.34230536855727,3.6078021476927,1.0108910337347,1.05220927943237,0.520481771850815,0.229902104433473,1.44049703844279,1.35634336052144,1.36072998302656,1.2811372028485,1.03071897015702,3.10444044886819,0.646703978798527,0.945530400839096,1.75951124163949,1.53437012699302,1.39023624612799,1.39300866608867,2.67516777330327,1.19420560091096,0,0,0,1.03562886267751,1.40715635988658,0.720248245844059,4.26140524053378,4.32881309844288,4.16521204795921,6.74348439776183,4.29237442239391,5.25444040652263,5.75959474697182,14.1184019108022,15.4030738137126,14.0351987928319,10.7579556492615,12.8838162009957,3.15434922846191,0.92614151141356,0,0.528901133327089,1.2797295032114,1.85789337488351,0.77320476793256,1.81515172161008,2.00140239460383,1.14135375667535,0.949058123089023,1.31759163779209,2.26201687920243,1.1937388322469,2.72949721966768,3.59527763461689,1.51296634912286,0.597423819763102,1.51734320762465,2.51346727741403,2.25415471346161,3.46207257337034,2.32742984601151,2.80543279561274,4.3000845244495,6.6424566590821,6.27994911365499,3.20832626196681,0.592905254174298,1.16791574001266,0.982794975566015,1.12431056192427,1.01430060694251,0.482354319504834,0.50925170356284,1.43848068725405,0.648540907100142,0.823684239564244,1.43768206527355,1.48856379067401,0.312037673114561,0.505157755894224,0.717589654087649,0,14.2259956428286,0.568474235311454,4.88894929326078,4.07388205860452,5.16318546234705,9.04533790185805,10.4739201989846,8.78101415360095,9.45810864637146,14.6166695168191,11.6401981119966,20.1551877100358,15.1962784041988,12.5844680965915,0,0,3.44234991113325,2.20749397043786,3.53211297973142,4.10240903072711,0,5.80683132570058,0,0,0,0,0,0,0,0,0,1.28528526568723,2.83880170416537,0.35613120733451,1.14020871547503,6.59880491890142,2.65490276679926,0.728341908464944,1.209294227859,0.754420319023592,1.47650946440386,2.76691633149535,2.84271122485043,1.45413491791002,1.78248689192361,3.16036757935816,1.05418608574999,1.03135543248187,0.680879211507576,0.900305470156551,0.646793418913773,1.07168517515796,3.19212420556092,2.49716344642899,1.81003922662333,0.913394847343798,1.40803024838226,3.81297727554876,0.441056796109924,3.2977250588296,3.06782410722221,2.0506394475573,1.19372344003136,1.31312719796049,1.45740418314925,3.70850604021019,0.341741761595705,2.27025554759545,2.03713980106683,1.69531611304222,0.546776910884101,0.915112692826091,0.509935289981566,0.279902904647316,0.414599921413271,0,0.632671987162271,1.62655573701479,1.08005340821801,1.04544148007234,0.87345025498471,0.944050424693745,1.48776220305605,1.30877970992015,0.518459893167171,0,0,2.0932316446157,1.32366792365678,1.16670713006429,1.6790777052105,2.70329800785245,1.64300134104056,0.39061315453185,0.419437377702843,0.966336483304024,1.44015003128933,0,0.405450430580328,0.718976700153791,0.389762468933385,0.716106782669926,0.79472541912506,0.480781798079875,0.295379054349154,0.100966449948148,0.228620419965,0.705783295957884,0.38983152295901,0.288635524920988,0.350630706544707,4.98806843953465,0.443971906748129,0.538283139656854,0.503653849092235,3.09103350451505,1.87682475451182,2.74727436400898,1.92931541171159,0.501572104035363,2.25900737046827,0.460325236507177,0,1.20297227640581,0,0.755393897389701,0.675022500231806,0,0.453142408984205,0.51776031175182,0.726511433089237,0.399024873401031,0.512200817262403,1.94485373654635,0.419226325255965,1.65459157605013,2.66696073361938,4.73880631649457,1.60459604795908,3.03236654116557,2.78827229879264,3.77252682772152,3.46473577638565,2.43295579138503,2.29741875822453,3.33405583898152,2.78122382267653,3.08654752741928,2.47251540481984,2.35518272215036,4.11443102862498,2.30718548007139,0.715308569841963,2.18019624948493,3.48204707536723,3.55381353145041,2.19513567447327,1.05227884575137,1.35804113845862,2.24456908663095,3.08451047122853,1.97008964751127,3.27384834535751,2.63392630016142,1.54325288784913,0.999242311751784,4.21076895201735,2.79332370262788,3.25190164517034,3.52946270591225,4.86922454802885|short_description=p2@Shroom4}}
|EntrezGene=208431
|HGNC=
|MCL_coexpression_id=94
|UniProt=Q1W617
|association_with_transcript=0bp_to_ENSMUST00000089520,uc009skz.1_5end
|description=CAGE_peak_2_at_Shroom4_5end
|id=chrX:6154377..6154412,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!3.37e-09!333;UBERON:0002048!8.48e-09!14;UBERON:0000117!8.48e-09!14;UBERON:0000171!8.48e-09!14;UBERON:0000170!8.48e-09!14;UBERON:0005597!8.48e-09!14;UBERON:0000118!8.48e-09!14;UBERON:0005153!1.76e-08!17;UBERON:0003103!5.72e-07!43
|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.90e-09,14;UBERON:0000117,2.90e-09,14;UBERON:0000171,2.90e-09,14;UBERON:0000170,2.90e-09,14;UBERON:0005597,2.90e-09,14;UBERON:0000118,2.90e-09,14;UBERON:0005153,9.77e-09,17;UBERON:0003103,4.72e-07,43
|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,1.14613375975503,0,0.404632921719196,1.05798195854407,0,0,0,0,0,0,0,0,0.622137673850866,0.270011876663381,0.841299845405528,0.856952953211411,0.662605622854841,0.367472397644862,0.383381884072945,0,1.10115880999389,2.55374676170375,1.53606533256243,0.791317726381163,1.28082701043374,0,0.837548997004143,3.37657566019008,1.98637722109853,0.589257170947335,1.42371680799103,1.1183966749518,0.151452386666368,0,11.8844440367688,2.58127163094416,0,0,0,0.896053774194671,1.12355536105401,0,0,0,0.14084341977668,0,0,0,0,0,0,0.5709193985953,2.84831672011889,2.9688427812965,0.693941307064543,1.82679286987285,2.30615497256059,1.50722640552623,1.88141931417128,2.01066546127481,1.73036477414062,9.10975948595443,1.76922110389975,3.558870698843,3.97514733228708,2.90925151881133,0,1.75668478206928,1.8850203613211,0.255457055208591,0.11981512450592,0,0,2.99581278809645,3.66000482254901,1.13088916901578,2.08589184230732,3.3243009452943,3.1168206683934,2.10913641988085,2.34230536855727,3.6078021476927,1.0108910337347,1.05220927943237,0.520481771850815,0.229902104433473,1.44049703844279,1.35634336052144,1.36072998302656,1.2811372028485,1.03071897015702,3.10444044886819,0.646703978798527,0.945530400839096,1.75951124163949,1.53437012699302,1.39023624612799,1.39300866608867,2.67516777330327,1.19420560091096,0,0,0,1.03562886267751,1.40715635988658,0.720248245844059,4.26140524053378,4.32881309844288,4.16521204795921,6.74348439776183,4.29237442239391,5.25444040652263,5.75959474697182,14.1184019108022,15.4030738137126,14.0351987928319,10.7579556492615,12.8838162009957,3.15434922846191,0.92614151141356,0,0.528901133327089,1.2797295032114,1.85789337488351,0.77320476793256,1.81515172161008,2.00140239460383,1.14135375667535,0.949058123089023,1.31759163779209,2.26201687920243,1.1937388322469,2.72949721966768,3.59527763461689,1.51296634912286,0.597423819763102,1.51734320762465,2.51346727741403,2.25415471346161,3.46207257337034,2.32742984601151,2.80543279561274,4.3000845244495,6.6424566590821,6.27994911365499,3.20832626196681,0.592905254174298,1.16791574001266,0.982794975566015,1.12431056192427,1.01430060694251,0.482354319504834,0.50925170356284,1.43848068725405,0.648540907100142,0.823684239564244,1.43768206527355,1.48856379067401,0.312037673114561,0.505157755894224,0.717589654087649,0,14.2259956428286,0.568474235311454,4.88894929326078,4.07388205860452,5.16318546234705,9.04533790185805,10.4739201989846,8.78101415360095,9.45810864637146,14.6166695168191,11.6401981119966,20.1551877100358,15.1962784041988,12.5844680965915,0,0,3.44234991113325,2.20749397043786,3.53211297973142,4.10240903072711,0,5.80683132570058,0,0,0,0,0,0,0,0,0,1.28528526568723,2.83880170416537,0.35613120733451,1.14020871547503,6.59880491890142,2.65490276679926,0.728341908464944,1.209294227859,0.754420319023592,1.47650946440386,2.76691633149535,2.84271122485043,1.45413491791002,1.78248689192361,3.16036757935816,1.05418608574999,1.03135543248187,0.680879211507576,0.900305470156551,0.646793418913773,1.07168517515796,3.19212420556092,2.49716344642899,1.81003922662333,0.913394847343798,1.40803024838226,3.81297727554876,0.441056796109924,3.2977250588296,3.06782410722221,2.0506394475573,1.19372344003136,1.31312719796049,1.45740418314925,3.70850604021019,0.341741761595705,2.27025554759545,2.03713980106683,1.69531611304222,0.546776910884101,0.915112692826091,0.509935289981566,0.279902904647316,0.414599921413271,0,0.632671987162271,1.62655573701479,1.08005340821801,1.04544148007234,0.87345025498471,0.944050424693745,1.48776220305605,1.30877970992015,0.518459893167171,0,0,2.0932316446157,1.32366792365678,1.16670713006429,1.6790777052105,2.70329800785245,1.64300134104056,0.39061315453185,0.419437377702843,0.966336483304024,1.44015003128933,0,0.405450430580328,0.718976700153791,0.389762468933385,0.716106782669926,0.79472541912506,0.480781798079875,0.295379054349154,0.100966449948148,0.228620419965,0.705783295957884,0.38983152295901,0.288635524920988,0.350630706544707,4.98806843953465,0.443971906748129,0.538283139656854,0.503653849092235,3.09103350451505,1.87682475451182,2.74727436400898,1.92931541171159,0.501572104035363,2.25900737046827,0.460325236507177,0,1.20297227640581,0,0.755393897389701,0.675022500231806,0,0.453142408984205,0.51776031175182,0.726511433089237,0.399024873401031,0.512200817262403,1.94485373654635,0.419226325255965,1.65459157605013,2.66696073361938,4.73880631649457,1.60459604795908,3.03236654116557,2.78827229879264,3.77252682772152,3.46473577638565,2.43295579138503,2.29741875822453,3.33405583898152,2.78122382267653,3.08654752741928,2.47251540481984,2.35518272215036,4.11443102862498,2.30718548007139,0.715308569841963,2.18019624948493,3.48204707536723,3.55381353145041,2.19513567447327,1.05227884575137,1.35804113845862,2.24456908663095,3.08451047122853,1.97008964751127,3.27384834535751,2.63392630016142,1.54325288784913,0.999242311751784,4.21076895201735,2.79332370262788,3.25190164517034,3.52946270591225,4.86922454802885
|short_description=p2@Shroom4
}}

Revision as of 19:59, 14 September 2013

Short description:p2@Shroom4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Shroom4_5end
Coexpression cluster:MCL_coexpression_mm9:94
Association with transcript: 0bp_to_ENSMUST00000089520, uc009skz.1_5end
EntrezGene:Shroom4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Shroom4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G311.88
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H92.85
adrenal gland, adult.CNhs10508.49-24D72.97
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I32.01
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H19.11
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F53.56
bone (os femoris), neonate N16.CNhs11225.1525-43A63.98
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.00
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F23.12
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.34
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.61
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C61.36
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B52.68
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D44.26
heart, embryo E15.CNhs11017.431-16C84.33
heart, embryo E16.CNhs11021.457-17C64.17
heart, embryo E17.CNhs11025.479-18E56.74
heart, embryo E18.CNhs11030.1283-20G34.29
heart, neonate N00.CNhs11213.639-21E35.25
heart, neonate N03.CNhs11221.1349-25I25.76
heart, neonate N10.CNhs11118.749-24G114.12
heart, neonate N16.CNhs11209.782-15G115.40
heart, neonate N20.CNhs11127.821-26I614.04
heart, neonate N25.CNhs11196.1351-25D310.76
heart, neonate N30.CNhs11202.1390-42D212.88
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A52.73
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F82.51
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I23.46
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G72.81
kidney, neonate N10.CNhs11206.758-6D54.30
kidney, neonate N20.CNhs11113.832-19I16.64
kidney, neonate N25.CNhs11122.1353-25F36.28
kidney, neonate N30.CNhs11203.1385-42H13.21
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B114.23
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F84.89
lung, embryo E15.CNhs11020.432-17C54.07
lung, embryo E16.CNhs10998.458-17B65.16
lung, embryo E17.CNhs10605.480-44A69.05
lung, embryo E18.CNhs10583.1287-20I610.47
lung, neonate N00.CNhs11224.640-42C68.78
lung, neonate N06.CNhs11212.683-20E59.46
lung, neonate N07.CNhs11111.715-19A314.62
lung, neonate N10.CNhs11219.750-23E611.64
lung, neonate N20.CNhs11109.822-18A420.16
lung, neonate N25.CNhs11119.1359-25C715.20
lung, neonate N30.CNhs11133.1394-42H212.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C23.53
medulla oblongata, neonate N30.CNhs11200.1396-42A34.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.81
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I72.84
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G66.60
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B93.19
pituitary gland, embryo E16.CNhs11036.449-43F62.50
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G33.81
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C33.30
skin, neonate N00.CNhs11124.650-25G43.07
skin, neonate N03.CNhs11215.662-22H32.05
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C93.71
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C12.27
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D11.70
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G81.63
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A91.49
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F52.09
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G52.70
testis, neonate N00.CNhs11189.1300-22B71.64
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B44.99
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E43.09
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E52.75
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B34.21
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C63.25
whole body, neonate N06.CNhs10515.692-21D13.53
whole body, neonate N10.CNhs10518.761-6B44.87





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
lung2.90e-0914
respiratory tube2.90e-0914
respiration organ2.90e-0914
pair of lungs2.90e-0914
lung primordium2.90e-0914
lung bud2.90e-0914
epithelial bud9.77e-0917
compound organ4.72e-0743







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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