FFCP PHASE1:Mm9::chrX:93291421..93291455,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17698|HGNC=|MCL_coexpression_id=712|UniProt=|association_with_transcript=0bp_to_ENSMUST00000135027_5end|description=CAGE_peak_1_at_Msn_5end|id=chrX:93291421..93291455,+|ontology_enrichment_celltype=CL:0000219!1.51e-08!54;CL:0000988!3.52e-08!32;CL:0002032!3.52e-08!32;CL:0000037!3.52e-08!32;CL:0000566!3.52e-08!32;CL:0000837!3.52e-08!32;CL:0000838!5.85e-08!12;CL:0002320!1.82e-07!46;CL:0000134!1.82e-07!46;CL:0002031!1.84e-07!25;CL:0000084!2.30e-07!11;CL:0000827!2.30e-07!11;CL:0000542!5.84e-07!13;CL:0000051!5.84e-07!13;CL:0000738!5.86e-07!17;CL:0002087!5.86e-07!17;CL:0000791!6.70e-07!9;CL:0000789!6.70e-07!9;CL:0002420!6.70e-07!9;CL:0002419!6.70e-07!9;CL:0000790!6.70e-07!9|ontology_enrichment_celltype_v019_2=CL:0000219,1.49e-08,54;CL:0000988,3.52e-08,32;CL:0002032,3.52e-08,32;CL:0000037,3.52e-08,32;CL:0000837,3.52e-08,32;CL:0000838,5.85e-08,12;CL:0002320,1.80e-07,46;CL:0000134,1.80e-07,46;CL:0002031,1.84e-07,25;CL:0000084,2.30e-07,11;CL:0000827,2.30e-07,11;CL:0000542,5.84e-07,13;CL:0000051,5.84e-07,13;CL:0000738,5.86e-07,17;CL:0002087,5.86e-07,17;CL:0000791,6.70e-07,9;CL:0000789,6.70e-07,9;CL:0002420,6.70e-07,9;CL:0002419,6.70e-07,9;CL:0000790,6.70e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003081!1.55e-20!88;UBERON:0000926!5.49e-17!193;UBERON:0004120!5.49e-17!193;UBERON:0006603!5.49e-17!193;UBERON:0002390!1.62e-14!45;UBERON:0003061!1.62e-14!45;UBERON:0002193!2.50e-14!48;UBERON:0000065!3.89e-14!41;UBERON:0001004!9.48e-14!42;UBERON:0004177!7.38e-11!29;UBERON:0003104!1.90e-10!131;UBERON:0009142!1.90e-10!131;UBERON:0002405!6.35e-10!70;UBERON:0004872!6.88e-10!33;UBERON:0000072!1.14e-09!27;UBERON:0002370!8.00e-09!23;UBERON:0000974!8.00e-09!23;UBERON:0004807!8.00e-09!23;UBERON:0005058!8.00e-09!23;UBERON:0003351!8.00e-09!23;UBERON:0009113!8.00e-09!23;UBERON:0003295!8.00e-09!23;UBERON:0009722!8.00e-09!23;UBERON:0005562!8.00e-09!23;UBERON:0007690!8.00e-09!23;UBERON:0006562!1.01e-08!24;UBERON:0001557!1.01e-08!24;UBERON:0001042!1.01e-08!24;UBERON:0008814!1.01e-08!24;UBERON:0009145!1.01e-08!24;UBERON:0003408!2.03e-08!24;UBERON:0002204!2.93e-08!32;UBERON:0002384!1.82e-07!46;UBERON:0004535!2.08e-07!23;UBERON:0001009!2.08e-07!23;UBERON:0000077!3.00e-07!97;UBERON:0001041!5.27e-07!92|ontology_enrichment_uberon_v019_2=UBERON:0003081,7.53e-20,87;UBERON:0000926,1.24e-15,120;UBERON:0004120,1.24e-15,120;UBERON:0006603,1.24e-15,120;UBERON:0002390,1.62e-14,45;UBERON:0003061,1.62e-14,45;UBERON:0002193,2.50e-14,48;UBERON:0002405,2.50e-14,48;UBERON:0000065,3.89e-14,41;UBERON:0001004,9.48e-14,42;UBERON:0000077,6.17e-11,35;UBERON:0004177,7.38e-11,29;UBERON:0005057,7.38e-11,29;UBERON:0004872,6.87e-10,33;UBERON:0000072,1.14e-09,27;UBERON:0001041,4.16e-09,80;UBERON:0002370,8.00e-09,23;UBERON:0000974,8.00e-09,23;UBERON:0004807,8.00e-09,23;UBERON:0005058,8.00e-09,23;UBERON:0003351,8.00e-09,23;UBERON:0009113,8.00e-09,23;UBERON:0003295,8.00e-09,23;UBERON:0009722,8.00e-09,23;UBERON:0005562,8.00e-09,23;UBERON:0007690,8.00e-09,23;UBERON:0006562,1.01e-08,24;UBERON:0001557,1.01e-08,24;UBERON:0001042,1.01e-08,24;UBERON:0008814,1.01e-08,24;UBERON:0009145,1.01e-08,24;UBERON:0003408,2.03e-08,24;UBERON:0002204,2.93e-08,32;UBERON:0001048,1.64e-07,134;UBERON:0002384,1.80e-07,46;UBERON:0004535,2.08e-07,23;UBERON:0001009,2.08e-07,23|phase1_expression=12.8119077683835,1.39590163055744,0.454999239389536,0,0,0,1.16806320297763,322.937431927382,482.34216209161,514.005699803098,212.310280599626,155.396165722915,504.01494891747,460.180998333602,68.2875011722109,108.526743320947,57.364074006508,419.249217761098,392.284394546019,321.687356062907,65.0581169655684,108.624300613769,110.748710594909,34.238378477789,40.8348520299563,1.14846392823004,0.86152399231815,1.07735616342945,3.6104449696711,5.79669298447841,4.43461021310609,24.7661962649256,27.0628506537211,15.8481681015439,0,0.332469290716985,0,541.998461804296,367.227611926186,488.447653127554,481.761588697401,510.234977263959,495.220560091777,138.234706137184,137.974003389759,106.273569501614,22.6893489860931,62.1371695684273,85.4579250837095,101.297977417702,81.3321109643356,58.9385513896383,358.551429145383,481.640462295533,494.057884739422,154.87018049364,171.633530523315,147.482218391349,5.26022798234954,8.46385566835253,8.87363964908651,50.8266798103698,69.3649940966689,97.6391193250318,101.853235344398,90.9414547131008,39.247614477911,39.5744854481201,10.6800300677732,11.2054928815303,11.3575479129746,9.42648248532552,14.1355866209033,11.2691535277758,10.7346927540425,11.0306254393203,8.8092704799511,13.7902325132003,13.2101618600369,6.85808696197008,7.77644970620482,5.73004707612436,10.0505879640497,9.56696437053856,13.5990440521361,14.7314292736834,14.6642831223076,13.2343606535963,161.902601346347,215.454517864446,190.151104588301,73.9964534203992,0,1.61910957491345,8.4470934268197,6.2723764193627,49.4364358863767,188.66636709391,120.800492140334,112.715324268799,13.661811718338,83.4122103193066,40.7688383530633,21.3320010945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| ||
|EntrezGene=17698 | |||
|HGNC= | |||
|MCL_coexpression_id=712 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000135027_5end | |||
|description=CAGE_peak_1_at_Msn_5end | |||
|id=chrX:93291421..93291455,+ | |||
|ontology_enrichment_celltype=CL:0000219!1.51e-08!54;CL:0000988!3.52e-08!32;CL:0002032!3.52e-08!32;CL:0000037!3.52e-08!32;CL:0000566!3.52e-08!32;CL:0000837!3.52e-08!32;CL:0000838!5.85e-08!12;CL:0002320!1.82e-07!46;CL:0000134!1.82e-07!46;CL:0002031!1.84e-07!25;CL:0000084!2.30e-07!11;CL:0000827!2.30e-07!11;CL:0000542!5.84e-07!13;CL:0000051!5.84e-07!13;CL:0000738!5.86e-07!17;CL:0002087!5.86e-07!17;CL:0000791!6.70e-07!9;CL:0000789!6.70e-07!9;CL:0002420!6.70e-07!9;CL:0002419!6.70e-07!9;CL:0000790!6.70e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,1.49e-08,54;CL:0000988,3.52e-08,32;CL:0002032,3.52e-08,32;CL:0000037,3.52e-08,32;CL:0000837,3.52e-08,32;CL:0000838,5.85e-08,12;CL:0002320,1.80e-07,46;CL:0000134,1.80e-07,46;CL:0002031,1.84e-07,25;CL:0000084,2.30e-07,11;CL:0000827,2.30e-07,11;CL:0000542,5.84e-07,13;CL:0000051,5.84e-07,13;CL:0000738,5.86e-07,17;CL:0002087,5.86e-07,17;CL:0000791,6.70e-07,9;CL:0000789,6.70e-07,9;CL:0002420,6.70e-07,9;CL:0002419,6.70e-07,9;CL:0000790,6.70e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.55e-20!88;UBERON:0000926!5.49e-17!193;UBERON:0004120!5.49e-17!193;UBERON:0006603!5.49e-17!193;UBERON:0002390!1.62e-14!45;UBERON:0003061!1.62e-14!45;UBERON:0002193!2.50e-14!48;UBERON:0000065!3.89e-14!41;UBERON:0001004!9.48e-14!42;UBERON:0004177!7.38e-11!29;UBERON:0003104!1.90e-10!131;UBERON:0009142!1.90e-10!131;UBERON:0002405!6.35e-10!70;UBERON:0004872!6.88e-10!33;UBERON:0000072!1.14e-09!27;UBERON:0002370!8.00e-09!23;UBERON:0000974!8.00e-09!23;UBERON:0004807!8.00e-09!23;UBERON:0005058!8.00e-09!23;UBERON:0003351!8.00e-09!23;UBERON:0009113!8.00e-09!23;UBERON:0003295!8.00e-09!23;UBERON:0009722!8.00e-09!23;UBERON:0005562!8.00e-09!23;UBERON:0007690!8.00e-09!23;UBERON:0006562!1.01e-08!24;UBERON:0001557!1.01e-08!24;UBERON:0001042!1.01e-08!24;UBERON:0008814!1.01e-08!24;UBERON:0009145!1.01e-08!24;UBERON:0003408!2.03e-08!24;UBERON:0002204!2.93e-08!32;UBERON:0002384!1.82e-07!46;UBERON:0004535!2.08e-07!23;UBERON:0001009!2.08e-07!23;UBERON:0000077!3.00e-07!97;UBERON:0001041!5.27e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,7.53e-20,87;UBERON:0000926,1.24e-15,120;UBERON:0004120,1.24e-15,120;UBERON:0006603,1.24e-15,120;UBERON:0002390,1.62e-14,45;UBERON:0003061,1.62e-14,45;UBERON:0002193,2.50e-14,48;UBERON:0002405,2.50e-14,48;UBERON:0000065,3.89e-14,41;UBERON:0001004,9.48e-14,42;UBERON:0000077,6.17e-11,35;UBERON:0004177,7.38e-11,29;UBERON:0005057,7.38e-11,29;UBERON:0004872,6.87e-10,33;UBERON:0000072,1.14e-09,27;UBERON:0001041,4.16e-09,80;UBERON:0002370,8.00e-09,23;UBERON:0000974,8.00e-09,23;UBERON:0004807,8.00e-09,23;UBERON:0005058,8.00e-09,23;UBERON:0003351,8.00e-09,23;UBERON:0009113,8.00e-09,23;UBERON:0003295,8.00e-09,23;UBERON:0009722,8.00e-09,23;UBERON:0005562,8.00e-09,23;UBERON:0007690,8.00e-09,23;UBERON:0006562,1.01e-08,24;UBERON:0001557,1.01e-08,24;UBERON:0001042,1.01e-08,24;UBERON:0008814,1.01e-08,24;UBERON:0009145,1.01e-08,24;UBERON:0003408,2.03e-08,24;UBERON:0002204,2.93e-08,32;UBERON:0001048,1.64e-07,134;UBERON:0002384,1.80e-07,46;UBERON:0004535,2.08e-07,23;UBERON:0001009,2.08e-07,23 | |||
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| |||
|short_description=p1@Msn | |||
}} |
Revision as of 20:17, 14 September 2013
Short description: | p1@Msn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Msn_5end |
Coexpression cluster: | MCL_coexpression_mm9:712 |
Association with transcript: | 0bp_to_ENSMUST00000135027_5end |
EntrezGene: | Msn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 1.49e-08 | 54 |
hematopoietic cell | 3.52e-08 | 32 |
hematopoietic oligopotent progenitor cell | 3.52e-08 | 32 |
hematopoietic stem cell | 3.52e-08 | 32 |
hematopoietic multipotent progenitor cell | 3.52e-08 | 32 |
lymphoid lineage restricted progenitor cell | 5.85e-08 | 12 |
connective tissue cell | 1.80e-07 | 46 |
mesenchymal cell | 1.80e-07 | 46 |
hematopoietic lineage restricted progenitor cell | 1.84e-07 | 25 |
T cell | 2.30e-07 | 11 |
pro-T cell | 2.30e-07 | 11 |
lymphocyte | 5.84e-07 | 13 |
common lymphoid progenitor | 5.84e-07 | 13 |
leukocyte | 5.86e-07 | 17 |
nongranular leukocyte | 5.86e-07 | 17 |
mature alpha-beta T cell | 6.70e-07 | 9 |
alpha-beta T cell | 6.70e-07 | 9 |
immature T cell | 6.70e-07 | 9 |
mature T cell | 6.70e-07 | 9 |
immature alpha-beta T cell | 6.70e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.