Coexpression cluster:C2973: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{Coexpression_clusters
|full_id=C2973_Mesenchymal_Alveolar_Renal_Pericytes_Hepatic_Smooth_Astrocyte
|id=C2973
}}") |
No edit summary |
||
| (7 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{Coexpression_clusters | {{Coexpression_clusters|coexpression_dpi_cluster_scores_median=0.0379899157877783,0.0417865295513162,0.000255673065678863,0.0832507597025844,0.0683905552353612,0.0653751408189089,0.166300653355485,0.00573048482250571,0.189299770824132,0.321012191379844,0.768255198088515,0.268074156811321,0.335402999107162,0.0861027369037228,0.234209077663466,0.0739833871346728,0.0645028481742653,0.0608430231344632,0.0892370909895919,0.36615900839655,0.513588261971934,0.516865876694253,0.180858018039213,0.091663149205561,0.317824246367491,-0.311999788587935,-0.369483837764205,-0.395336778042875,-0.352757449033333,-0.372766645576291,-0.257396238570935,0.371779433930907,0.393709665986455,0.254408891023089,-0.167418998186768,-0.149536438342222,-0.155115071857948,-0.209402034185779,-0.212225306900116,-0.15147199954514,-0.0884642889312325,-0.113849387209353,-0.08377158508973,-0.448773583065919,-0.575310606953502,-0.456149967288599,-0.462130037157779,-0.499637179900555,-0.62792558625308,-0.430538939595427,-0.421998220905342,-0.62792558625308,-0.389026017507817,-0.419026942004178,-0.256070264811624,-0.299657315678333,-0.438768827571745,-0.300849306603491,-0.345019999679814,-0.62792558625308,-0.413257311865881,-0.471430328841118,-0.424242568102675,-0.473737617381682,-0.429153487716514,-0.432749837776358,-0.62792558625308,-0.446520294984087,-0.430660968617223,-0.542567622771692,-0.342190895583376,-0.491751357623669,-0.62792558625308,-0.318759374953169,-0.170916333703564,-0.235788609917166,-0.206966869983453,-0.143411069973432,-0.338563202600683,-0.269352925672642,-0.24668041170595,-0.339830473966082,-0.215722278152063,-0.117722007987474,-0.184034147148615,-0.199687500971918,-0.262492507278258,-0.194727710460627,-0.175881185778529,-0.0410951825704314,-0.593844869719823,-0.29057129139892,-0.283950137640765,-0.279308397264238,-0.416896576227609,-0.00876868026710664,-0.483843689805105,-0.217647352695369,-0.205530780861342,-0.113670234362913,-0.175551625884052,-0.167299262014421,-0.144279319584696,-0.164446224257857,-0.119842238183414,-0.136371636232125,-0.220270738280821,-0.189125925959067,-0.0780195392278318,-0.158011085923696,-0.0841179496008553,-0.152013801614532,-0.224148053456324,-0.269164412057623,-0.174702176050058,-0.214673992204705,-0.168822070425056,-0.144504635097171,-0.324280607944722,-0.12419818106475,-0.1432066038049,-0.127501719480691,-0.10664265323649,-0.180783221641867,-0.203550667829849,-0.144632510856568,-0.167061877784118,-0.325154585646868,-0.22336860973943,-0.391012704811561,0.112859510428337,0.219419239089313,0.115918640069004,0.0364090464473006,0.139937159626805,0.117179703102078,-0.0634320225343594,0.140442288160154,0.107923631756749,0.216346119697772,0.181348323330475,-0.0614797208346813,0.448230877883525,0.224833936900643,-0.380838986102982,-0.430010682429246,-0.179689128942021,-0.343023422050607,-0.296702867009729,-0.386649378016407,0.294739999577577,0.161754351614186,0.227374896046752,0.156532755274985,0.247107499969666,0.247271324420868,0.323499789512731,0.115918304307878,0.0507636998081151,-0.0586053431019202,0.284385447015703,0.117276712521613,0.377868663670996,0.101346826391075,0.33505166074481,0.0407146798063094,0.133356347619693,0.116153624883195,0.303248996713068,0.254750705704303,0.262968289149357,-0.926388926359615,-0.62792558625308,0.336196463238848,0.124825760853431,0.0174007558094952,-0.0209629181832086,0.0595678107178341,7.89299783365838e-05,0.192063996324115,0.241595942633949,0.205316832192313,-0.00452776365895913,0.118721287233743,0.00395495174823357,0.197447782330646,0.163455075004013,0.228436388149436,0.0851283348570484,0.198454943876501,0.0732055238736919,0.113818793088452,0.102094754697621,0.118794186069036,0.00214277811689734,0.0880834370091375,-0.00331296495501343,-0.0995224131686688,0.0564353363669399,0.248562956402262,0.45372610878419,0.113517402776368,0.0713737173763848,-0.0846552616199202,0.125963236614481,0.163382017277202,0.0886341037157895,0.0484133328829424,-0.0607998338964891,0.0735095515505682,-0.00757348758526222,0.0623754428994494,0.039418031899364,0.12316325822135,0.0462314017860281,-0.0403046711383427,0.00102229077770954,0.188550569285115,0.00693405250342227,0.00254380869721826,-0.132373262881587,-0.0188729562196182,0.118563511705214,0.0232259362720252,0.0558159229372326,0.0941859169428225,-0.0117694170340077,0.0386936834457745,0.0187399328820879,0.0515146845377592,0.00767666678744972,0.10800912794099,0.121670624880082,0.276988256502898,0.166212049626128,0.123636739391778,0.0493132445259878,-0.085792246536171,-0.161928285843214,-0.130198981858404,-0.261777737039709,-0.232348763845561,-0.288205284509536,-0.155554853505868,-0.10227738903648,-0.161987462980113,0.332055442094648,0.431903435531778,0.370804658873239,0.541320716757054,-0.155522342612891,-0.0680934263385469,-0.101178105390755,-0.261616719023557,-0.271514432239852,0.0663337622877095,0.112228156928082,0.306324332749717,0.0724540439482055,0.0846869615329813,0.00128854176342774,0.184497327222256,0.24251229143691,0.123139104986034,-0.0470740885533074,0.193607033833773,0.294015665785555,0.0868727029258939,-0.046093862864143,-0.123092579466578,-0.115838352514126,-0.286020609877641,-0.169835831904144,0.22532747771286,-0.071084522463904,-0.0383772417726904,-0.133240208931595,-0.0628464088113159,0.284533915878995,-0.62792558625308,-0.304507007612599,-0.268744840939164,-0.281858546036285,-0.227403276449957,-0.02069592639812,0.191595148086168,0.336108647679418,0.352242481364632,0.098541527855161,-0.0254932842359669,-0.105952183715819,0.145504443297108,0.230470223991187,-0.0765942786589582,-0.0193866555429645,0.822483249552631,0.155393052856165,0.0425919106707726,-0.00592554680301416,0.227956021158712,0.35029821738423,0.33718603726826,0.083298823628213,0.358037055755324,0.296827186109021,0.0787623116330554,0.0630949974293916,0.132981599353116,0.0198646150226844,0.223377670487634,0.0663570122990105,-0.282309227095925,-0.228981497705098,-0.171184433406073,0.0340497617469266,0.233992415290696,0.157256292701478,-0.0122752555399741,0.173176708891991,0.0167987919516916,-0.199583877531284,-0.330131426618812,-0.267376579551266,-0.281136082185013,0.030784389746666,0.0626421984908002,0.162946157784744,0.258601833187121,0.146606353769266,-0.62792558625308,-0.625725290653861,-0.804033490011464,-0.0237324876607776,0.250575983446071,0.192014677055577,0.0481710762347444,0.0591689880064838,-0.00945404431970132,0.0595416526564836,0.162043523506317,0.154430565740002,0.25923063420411,-0.0134017421453461,0.107069769344238,-0.0308842101927528,0.540566796183782,0.486352372377755,-0.277559673602997,-0.411194386124779,-0.337002841132892,0.226764372674611,0.548882173013206,0.364206169908159,0.0818275216967104,-0.00233521000390824,0.0940474437469623,-0.00666732583123686,0.0331248299063888,-0.0251217239709995,0.215955611235602,0.0297824578806349,0.102868163745117,-0.104728163192815,-0.0135001758590587,0.114972659744147,-0.142969725634584,0.0750734265382302,-0.0618240848194709,-0.0504728146317399,0.0275974254463545,0.0678082144558114,0.410551170631968,0.0880105354380065,0.740635373044927,0.457558349263967,0.0601482932058641,0.5738939286233,0.35771546561919,0.058310491831477,0.579092305697485,0.450389120326881,0.646998773767251,0.206454687714801,0.302147066072205,0.340762709500987,-0.223978609097678,-0.151261387533834,0.311269259715468,0.365792532604636,0.124411015223413,-0.298842887512755,0.169577527539505,0.00558124682232986,0.226996227897796,0.120482925677776,0.0156466440813998,0.179173590935504,0.156235376560752,0.186730286799111,0.111610409892066,0.0779138424611288,0.150518264158166,0.172797091547822,0.141972256062197,-0.0477211237900217,0.0826782772055448,0.0385726592342952,0.0578704153995064,0.293466163124549,-0.044351517101337,0.233808030558916,0.187957816606183,0.27904003003218,0.122047777761146,0.324815601278817,0.0461311407070059,0.236982365311988,0.182612528448616,0.147057178082151,0.455447807578069,0.0761846344077652,0.206743566824289,0.355900666702853,0.0512588927152086,0.191057227668012,0.179566856403226,0.234929675781086,0.237794900379226,0.236518852993971,0.45898836375599,0.0549474314623588,0.279746591206783,-0.0446474117434341,-0.0347191298521232,0.26308119500187,0.221187734299288,0.124063802437614,0.0938599453023972,0.272185064205039,0.0927044464728699,0.31212220171452,0.298198832759083,0.197231655826136,-0.0432103944331179,0.159014146827513,0.198585678450871,0.062480650735054,0.0921066871595435,0.0776026670444234,0.24019416132512,0.449372969524212,0.183961652570082,0.172413120288272,0.359350835662944,-0.182518772681219,0.27961330432534,0.375868641210356,0.346363740401465,-0.00301183974223118,-0.264462630953839,-0.181175915136773,-0.315682913879396,-0.420344893565553,-0.366952704739286,-0.347888072607404,-0.307365973128094,-0.216614053008237,0.136032462160442,0.0580687278112768,-0.326475129673834,0.202014584229853,-0.0226578853847826,-0.0289522836781215,-0.173430151008015,0.0148207198883452,-0.183419567937183,0.0142200035669654,-0.332607959325981,0.0395612977642276,-0.0978069194031574,-0.0864411325745662,-0.160112540609179,-0.146267822627056,-0.185999805507845,-0.129504121998804,-0.054124293426608,-0.4008077518079,-0.0891098767893803,-0.132483346231781,-0.0735352823687643,-0.232956153010627,-0.252623883272139,0.14465251018418,0,-0.151031409934961,0.144780439310193,-0.0963628331510087,-0.211020593925727,-0.00749413726717929,-0.467825314930743,-0.0434404105121657,0.00980651863923854,0.0587590112930763,-0.0099214193442656,-0.089735036606603,0.0445616427661071,0.00394293559750336,-0.0458081017471226,0.236479057409274,-0.0888793009953532,-0.0603921405233183,-0.0514390854069836,0.0130392209577944,-0.279455595212348,0.0591180330034067,-0.0296105926687663,-0.350292108656398,-0.00215014250687573,-0.275639859666081,-0.187783004621215,0.0532414665567187,0.330472156349583,0.133481192000609,0.36130956558046,-0.177215580757934,-0.121203272753789,-0.04513385833223,-0.160393156475772,-0.246545632730637,-0.10339119074973,0.03065260416518,0.122171410884067,0.047564619471784,-0.136551349347463,0.108264193307708,-0.041436437271098,0.0318719922098711,0.167647397777531,0.287986767790199,0.00231448502759546,-0.0637252891341904,-0.0999140874086144,-0.023190201422044,0.138416683988692,-0.0299459402654765,-0.311681651378698,-0.137958572645683,0.0144509736104652,-0.104172334853567,0.225261261665857,-0.0824101447335858,-0.0130057471017619,-0.269425472772884,-0.218245969771842,-0.290516025305615,-0.218996553304532,-0.0594983408413267,-0.106659494828862,-0.181052690065346,-0.220554436124904,-0.0497813342716467,0.168941011111015,-0.0745065151713797,-0.0484818734936991,-0.469696651819393,-0.386323287725962,-0.373920319162986,0.0385606803764484,0.0944094610722894,0.0840664099671853,-0.209719750827551,-0.253240953804971,0.015421002179788,-0.0466310049004637,0.0690629069373219,0.281590038349856,-0.303095943920328,0.00626090423078451,-0.173305671738545,-0.151679357762699,-0.169357888544602,-0.167990944349947,-0.0179716762668045,-0.15192526903721,-0.051181984588775,-0.0803436674119038,-0.123589260804213,-0.218710957882076,0.0151867369981142,-0.0397147835221621,-0.0940381359557338,-0.249764517655301,-0.333304879813531,-0.025143148915361,-0.104347033744465,0.0159529902049025,-0.0910608270817734,-0.101008708791866,0.104111542280882,-0.251135517903077,-0.199250654395184,0.0535519819528281,-0.0452505311650671,-0.0916744929151565,-0.00133969473742179,-0.0162492507292198,-0.362499003692976,-0.0508831067992335,0.0115405730928304,0.066539327504775,0.0102931340094772,-0.0403214872375697,-0.0450115392775483,-0.02563749350332,-0.0334711472496816,0.195903444319761,0.0687117588949995,0.0815992775859948,-0.0630884900129598,0.0817587612803703,-0.0173585293248115,0,0.0774629134118723,0.143645144479765,0.0100880192596542,0.095717166279951,0.266835404650322,0.0342504034854361,0.0983279219518314,0.0319605677366332,-0.0765836240047396,-0.165648467568481,-0.0982785148286954,0.0283833121963999,0.14408350030922,0.0300278922385862,0.0208478136420178,-0.539798753777792,-0.350532571497288,0.174045476412046,0.103263712672661,-0.121886242056283,0.0999307822172628,-0.188556508108863,-0.0394973092028807,-0.0435752885050489,-0.0429757197789788,-0.0515849661489689,0.223035707156731,0.00137999452910331,0.0765964915694812,-0.0287979567162897,-0.10485896957509,-0.182464221035585,-0.000828951328285643,-0.188649791714572,-0.1623610572547,-0.0990164822304445,-0.0710260731226933,0.0795773672696461,-0.115309337612834,0.30051650511673,-0.175554260857466,-0.148739877558512,-0.0856686815023374,-0.18060723103378,-0.287187679982614,-0.258761961984761,-0.163283485279664,0.0220776285096733,-0.0231617291940693,-0.140008175985762,-0.0593400611747903,-0.144451027371112,0.0642125639490916,0.0531035771269019,0.0390723232398669,-0.18724834508914,-0.00292790756730521,-0.0152547035618094,0.0954321887976,-0.181781216621177,-0.227130174458387,-0.154124860079512,-0.0730823490622009,0.150937107961483,0.135181452582628,0.0471935985306073,0.079065896483091,0.058041542204611,-0.00823108525180971,0.0478075385403198,-0.0941369462891135,-0.00893534627561343,0.0268325204013486,0.0178397290296621,0.0299448661113179,-0.0126998445504205,-0.187837035702823,-0.009596048929156,-0.0361218826668446,0.0642465868005162,0.00482258125079693,0.123512309373294,-0.158995542964827,-0.0912125927461013,0.086615330260494,0.0852161742478375,0.0157616444679247,0.0693873708118204,0.272044738815754,0.0281432300673654,-0.0146483238352029,0.260225905278158,-0.0601140073281018,-0.123432134960044,0.149780299674918,0.0374015833341866,-0.0113711854470282,0.0407271439002144,0.074153640129075,-0.222407244030771,0.0467361595481084,0.125905562911125,0.0226201688960999,-0.146868792934738,0.150215613873167,-0.192216288282287,0.00196510195076249,0.0142708630944968,-0.255249727931515,-0.0706199392059983,-0.172608372483262,0.00312211320786981,0.0389308848917878,0.0135955784395347,-0.233722543898397,-0.0814580473616857,0.0193514395297889,0.115051809427899,-0.422890739391876,-0.0175476817579502,-0.000792078794375373,0.0566353395407839,0.155103247569497,0.088036145715012,0.230909222214875,0.151542619167089,0.0347212195331621,0.0570999784678498,0.0659497347711406,0.116210647579616,-0.220340384311747,-0.00444029062923057,0.025549354087304,0.0953195934846612,0.150940182251004,-0.11048988784553,0.0554992558217748,0.306032462358049,0.25024358110835,0.24687260232086,0.162163901301029,0.0576392463831148,-0.230699633483289,0.064683173647104,-0.276321497420365,0.0105880622270453,0.113950005560152,0.470797504182445,-0.0498795404749848,-0.060511216248653,-0.0481711466685413,0.0695688781813686,-0.0998922540638372,-0.137177898164254,-0.178874549182656,0.130126442575698,-0.00537042047073455,0.0166856971373566,0.131214206772374,0.255813742983551,0.0110116465774472,-0.0257919691361226,0.0498084452871956,-0.103543913477361,-0.164387807032994,-0.12956552873497,-0.232433047092024,-0.177476697483244,-0.184811708176517,-0.233291002277455,0.0864793504341232,-0.00719077989431094,0.20254557312024,-0.116619488554677,-0.178747101865763,-0.0391949575438613,0.151165377678347,-0.106947979437678,0.16260568136689,-0.267035888179851,-0.458324122180987,0.000377248382690931,0.0458366300236264,0.00254951522737712,0.140566859459537,0.0932394419141984,-0.0833488343206255,9.56313996798297e-05,0.141592166805714,-0.150047547500795,-0.00497641058417875,-0.0874473581621235,-0.0922990845115856,-0.314796888197417,0.08793544913876,0.13382900285964,0.0684052927268699,-0.197870342766056,-0.121586934874882,0.364225745497859,0.535920956126506,0.336626041335143,-0.040303036291891,0.154185828130841,0.0755636986887394,0.032014784727745,0.00210167417574714,-0.0681905924422412,-0.0888323864988296,-0.1727486873252,-0.0793825400030785,-0.0822685639875445,-0.138016392499334,-0.0369487338334824,-0.152845643610376,-0.246159214810632,0.18462177045332,0.120026117570888,-0.141120317083658,-0.0440303373819962,-0.204921553946587,-0.200841546215611,-0.154611491468941,-0.178995946640396,0.0800584329778038,-0.0812343311221497,-0.0917747493848754,0.0224765938454442,0.291937282016583,0.297281361058831,0.0277041939721849,0.185881527293886,0.171035653696355,0.117786145115893,0.0361305322211507,-0.100210929601507,0.0565537565211256,-0.227258509179263,-0.225831179187523,-0.140986446679225,-0.099985664846474,0.0453862479870558,-0.0621201013689745,-0.0893848649324349,-0.00401265608097867,0.11532205669735,0.0909189483030806,-0.0984219880000665,-0.180741697387038,-0.0351318109746712,0.021127955199435,0.0908164635341775,0.139109388963504,0.156257057337825,-0.157631323941529,-0.181846077508606,0.00460021639889474,-0.0306862280427358,0.121288313717288,0.289660759376367,0.0255939985288105,-0.0386909399245481,-0.0483632243490433,0.197925302384297,0.0084403164908391,-0.00257395819486583,-0.0463891124962452|full_id=C2973_Mesenchymal_Alveolar_Renal_Pericytes_Hepatic_Smooth_Astrocyte|id=C2973|ontology_enrichment_celltype=CL:0002321!2.52e-29!250;CL:0000222!4.48e-24!121;CL:0000055!1.80e-17!106;CL:0000183!1.88e-16!59;CL:0000393!3.68e-15!61;CL:0000211!3.68e-15!61;CL:0000187!3.83e-14!55;CL:0000680!4.58e-14!58;CL:0000056!4.58e-14!58;CL:0000355!4.58e-14!58;CL:0002078!2.54e-11!45;CL:0000192!3.38e-11!43;CL:0000514!3.38e-11!43;CL:0000115!7.00e-11!36;CL:0000359!1.41e-09!32;CL:0000213!7.95e-09!58;CL:0000215!7.95e-09!58;CL:1000449!1.98e-08!15;CL:0000221!3.30e-08!72;CL:0002139!3.30e-08!24;CL:0000071!9.05e-08!18;CL:0002546!9.05e-08!18;CL:0002681!2.77e-07!12;CL:0002584!2.77e-07!12|ontology_enrichment_disease=|ontology_enrichment_uberon=UBERON:0000119!4.31e-30!309;UBERON:0000483!1.39e-29!306;UBERON:0000477!3.69e-22!373;UBERON:0007503!2.38e-21!78;UBERON:0000486!3.59e-19!83;UBERON:0000481!4.04e-19!342;UBERON:0002049!4.34e-19!78;UBERON:0007798!4.34e-19!78;UBERON:0003077!4.08e-18!72;UBERON:0007285!4.08e-18!72;UBERON:0007524!5.25e-18!73;UBERON:0002329!8.15e-18!71;UBERON:0003059!8.15e-18!71;UBERON:0007282!8.15e-18!71;UBERON:0004290!8.15e-18!71;UBERON:0009618!8.15e-18!71;UBERON:0003104!3.96e-17!160;UBERON:0009142!3.96e-17!160;UBERON:0000025!8.04e-17!192;UBERON:0003914!8.77e-17!117;UBERON:0000490!9.04e-17!148;UBERON:0001134!8.29e-16!62;UBERON:0002036!8.29e-16!62;UBERON:0003082!8.29e-16!62;UBERON:0004111!5.74e-15!240;UBERON:0000055!9.78e-15!68;UBERON:0000475!1.10e-14!264;UBERON:0002385!1.31e-14!64;UBERON:0001015!1.31e-14!64;UBERON:0000383!1.31e-14!64;UBERON:0005256!4.30e-14!122;UBERON:0007500!7.55e-14!59;UBERON:0001981!7.55e-14!59;UBERON:0004537!7.55e-14!59;UBERON:0006965!7.55e-14!59;UBERON:0004872!1.04e-13!83;UBERON:0002100!4.27e-12!199;UBERON:0000468!5.14e-12!656;UBERON:0004121!3.83e-11!171;UBERON:0000924!3.83e-11!171;UBERON:0006601!3.83e-11!171;UBERON:0001637!7.74e-11!42;UBERON:0003509!7.74e-11!42;UBERON:0004572!7.74e-11!42;UBERON:0001009!1.46e-10!112;UBERON:0004535!2.56e-10!109;UBERON:0000064!6.85e-10!218;UBERON:0000467!1.45e-09!624;UBERON:0010314!1.86e-09!132;UBERON:0000480!2.61e-09!625;UBERON:0005423!1.75e-08!581;UBERON:0004211!1.98e-08!15;UBERON:0009773!1.98e-08!15;UBERON:0001231!1.98e-08!15;UBERON:0001285!1.98e-08!15;UBERON:0007684!1.98e-08!15;UBERON:0004208!1.98e-08!15;UBERON:0000922!2.21e-08!592;UBERON:0006555!4.28e-08!16;UBERON:0004819!4.28e-08!16;UBERON:0000353!6.90e-08!15;UBERON:0004638!9.05e-08!18;UBERON:0001986!9.05e-08!18;UBERON:0004852!9.05e-08!18;UBERON:0004573!1.42e-07!33;UBERON:0004571!1.42e-07!33;UBERON:0010371!2.33e-07!104;UBERON:0001225!2.77e-07!12;UBERON:0008987!2.77e-07!12;UBERON:0003103!4.40e-07!68;UBERON:0002050!8.20e-07!564;UBERON:0006914!9.28e-07!25|tf_chipseq_enrich=ATF3#467;2:14.9754496840058:0.00576829454079388:0.0259413044630742!BCLAF1#9774;3:21.6526476101218:9.8473954032885e-05:0.0013879245998975!CCNT2#905;3:6.33620157696263:0.00393075003576489:0.0189007183694866!CHD2#1106;3:10.3440228341169:0.000903370110274688:0.00658158848601173!E2F1#1869;3:4.90738921487932:0.00846098534723939:0.0323293033578581!E2F6#1876;3:5.01715573169739:0.0079176980688633:0.0320175192091228!EGR1#1958;3:4.98817909481014:0.00805648813738344:0.0318837273429401!ELF1#1997;3:4.25809795880754:0.0129517987505461:0.0459717546801347!ESR1#2099;2:20.5124021974363:0.00309974157709518:0.0162999803922382!ETS1#2113;3:9.72876092220234:0.00108584009258484:0.00759368243132903!GABPB1#2553;3:7.06768383618217:0.00283221282541742:0.0153595116457457!IRF1#3659;3:7.6371637535639:0.00224469274729724:0.0127541192445991!MAX#4149;3:6.45255550900712:0.00372191383426551:0.0185622921033788!MYC#4609;3:5.2222818716094:0.00702084375574015:0.0293006953448849!NFKB1#4790;3:5.48806342419384:0.00604938181565543:0.026841336878462!PAX5#5079;3:6.66956553117783:0.00337029099967726:0.0172172677418946!SETDB1#9869;2:26.880017452007:0.00181446890796441:0.0108902544841615!SIX5#147912;3:17.086715355459:0.000200406054632501:0.00238929314380865!SP1#6667;3:5.6983813781409:0.00540396270171217:0.0245299226618618!SRF#6722;3:13.7971782621678:0.000380661502580019:0.00373751120315452!TFAP2A#7020;2:11.0124229153633:0.0105499065521556:0.0389873567956046!TFAP2C#7022;3:10.8092286098602:0.000791674657575313:0.00612638630427594!TRIM28#10155;3:18.5905250452625:0.000155596929725528:0.00196450528815333!USF1#7391;3:6.36149927720796:0.0038840405729056:0.0189394580910303!YY1#7528;3:4.91117074985386:0.00844145534180826:0.0327714353744373!ZBTB33#10009;3:31.6647250299812:3.14815888737575e-05:0.000632776301075127!ZNF143#7702;3:13.5008765522279:0.000406280496299717:0.00387502545689919|tfbs_overrepresentation=0.147255,0.0586687,0.716932,0.0477154,0.199763,0.287811,0.0430074,0.414564,0.03272,0.0257057,0.139423,0.225367,0.188771,0.125978,0.148679,0.0619003,0.140982,0.0982016,0.0528514,0.108057,0.188635,0.132577,0.081977,0.0948982,0.0415721,0.215492,0.209392,0.0907212,0.143747,0.0933697,0.204953,0.114046,0.0180314,0.208242,0.0665252,0.0844722,0.324808,0.0429682,0.120351,0.0667043,0.0964797,0.0246116,0.140039,0.184019,0.120917,0.0362416,0.0380166,0.18151,0.111283,0.121201,0.154071,0.0541794,0.0701653,0.0929951,0.198787,0.0384161,0.107455,0.212709,0.0783235,0.105572,0.0294301,0.149417,0.108602,0.0759481,0.054569,0.0504887,0.00989266,0.0600088,0.0860723,0.167053,0.378921,0.067678,0.089036,0.119383,0.00747605,0.0171177,0.0964936,0.0436945,0.0372495,0.00725252,0.0956287,0.226912,0.0425,0.114846,0.291327,0.251834,0.064341,0.209032,0.0693924,0.062747,0.0857568,0.0495878,0.0953825,0.0473737,0.0853887,0.115028,0.58489,0.153631,0.0927458,0.27413,0.0574857,0.276221,0.141874,0.0370665,0.219088,0.0409286,0.0669887,0.338096,0.144217,0.269326,0.182599,0.0339971,0.149552,0.0176855,0.101221,0.0337525,0.0203386,0.0566549,0.139021,0.0838393,0.16671,0.214708,0.140123,0.0857827,0.102368,0.176912,0.0906875,0.0147934,0.0843604,0.134932,0.0595773,0.0748346,0.0572164,0.0227861,0.125792,0.108101,0.0648644,0.0553359,0.0330399,0.00395526,0.022776,0.127606,0.203923,0.155998,0.596561,0.0693171,0.0988228,0.0842275,0.0389418,0.120833,0.200647,0.143677,0.180712,0.0265818,0.0427088,0.117549,0.0747594,0.228385,0.0516985,0.0337251,0.227719,0.0952829,0.116642,0.147788,0.273479,0.114283,0.0400322,0.127369,0.0403542,0.312091,0.179689,0.137725,0.46397,0.0541353,0.0799324,0.090079,0.140334,0.181817,0.178449,0.0356339,0.158844,0.122474,0.0274061,0.115574,0.0737247,0.118847,0.183031,0.0401756,0.0828697,0.173562,0.107145,0.187297,0.122935,0.228812,0.112671,0.0470731,0.0782523,0.0602859,0.0676496,0.109673,0.0893019,0.060398,0.0308319,0.0606036,0.136451,0.259411,0.27358,0.15185,0.206299,0.178359,0.0458667,0.104357,0.121154,0.1129,0.312578,0.169057,0.164202,0.100942,0.062995,0.10299,0.14193,0.37245,0.15606,0.161026,0.0738599,0.126611,0.138852,0.085973,0.060453,0.059896,0.569726,0.384785,0.0418404,0.0765029,0.0959204,0.0931946,0.0472272,0.263087,0.163502,0.214803,0.182472,0.0695582,0.0983991,0.0830921,0.116283,0.136838,0.0815104,0.111647,0.372804,0.117027,0.159052,0.185164,0.185743,0.0980288,0.0980899,0.159674,0.107242,0.201859,0.0695832,0.582402,0.0619218,0.1751,0.163376,0.128096,0.0345133,0.0810678,0.0811639,0.0920653,0.118078,0.0755168,0.278352,0.063292,0.254773,0.119261,0.0865903,0.0380459,0.130174,0.584917,0.713218,0.782949,0.635872,0.563047,0.517782,0.489965,0.335423,0.629514,0.261553,0.118991,0.373681,0.309233,0.49143,0.330703,0.395854,0.329568,0.53472,0.0164332,0.271958,0.292154,0.0964816,0.39729,0.581713,0.0643874,0.187251,0.362792,0.181715,0.423979,0.109988,0.330894,0.218329,0.427027,0.376924,0.463191,0.280025,0.0407001,0.168255,0.370782,0.415647,0.142924,0.253571,0.276829,0.301787,0.141124,0.316882,0.223503,0.155672,0.603208,0.283727,0.314747,0.577664,0.291709,0.448095,0.576651,0.416816,0.292835,0.476744,0.439556,0.0807167,0.056723,0.608919,0.18237,0.706298,0.821217,9.55652e-05,0.275351,0.236471,0.185661,0.346319,0.535598,0.270984,0.0179843,0.0340542,0.513852,0.522083,0.248634,0.281576,0.472384,0.163244,0.0670502,0.0730934,0.184794,0.596648,0.421596,0.0583074,0.412837,0.305671,0.188159,0.551561,0.120021,0.218623,0.312808,0.333034,0.0451077,0.0747529,0.229003,0.0222308,0.589326,0.154921,0.294698,0.34331,0.0282052,0.289204,0.327108,0.683186,0.278044,0.229008,0.428671,0.228096,0.336314,0.19763,0.15631,0.20495,0.421464,0.48267,0.104399,0.165111,0.582303,0.335105,0.144809,0.145539,0.385517,0.376191,0.447325,0.459928,0.252232,0.152681,0.0465712,0.137098,0.259235,0.134788,0.0985856,0.0460163,0.293698,0.284593,0.343734,0.306556,0.305777,0.2348,0.155572,0.522888,0.284629,0.262537,0.359455,0.226257,0.405955,0.41707,0.363685,0.464871,0.40841,0.206222,0.525396,0.651524,0.437176,0.269226,0.339277,0.552319,0.281425,0.141758,0.124432,0.168058,0.159617,0.238587,0.372281,0.232251,0.189515,0.0891382,0.0595618,0.524997,0.625309,0.347298,0.539392,0.34988,0.475069,0.404569,0.0847452,0.262389,0.316179,0.0697683,0.0556835,0.192544,0.0779981,0.0575676,0.144322,0.223391,0.203656,0.442884,0.441735,0.191777,0.111931,0.28934,0.0435386,0.303336,0.126478,0.134852,0.10689,0.273326,0.0627924,0.381386,0.0179103,0.303939,0.0434097,0.390395,0.0464827,0.169603,0.114583,0.104559,0.0899537,0.0866966,0.15983,0.107111,0.0438639,0.00389058,0.123593,0.129156,0.210369,0.193675,0.346372,0.0499762,0.0828956,0.0666953,0.182185,0.111277,0.219383,0.332809,0.19559,0.132201,0.188694,0.0481795,0.199971,0.406014,0.127758,0.175785,0.184486,0.169234,0.0876426,0.0952322,0.0112557,0.222432,0.107043,0.275244,0.00481323,0.173708,0.141119,0.211595,0.0300692,0.131551,0.0445237,0.052362,0.208866,0.153187,0.0797897,0.0974211,0.160149,0.123526,0.0906475,0.0558058,0.28262,0.517717,0.137332,0.0145999,0.0656973,0.211746,0.220538,0.0801488,0.0757897,0.161801,0.193215,0.0549034,0.0779715,0.0561838,0.0417636,0.0345419,0.0388736,0.254674,0.170307,0.201033,0.0488949,0.174921,0.0791124,0.0330727,0.348757,0.219556,0.0394698,0.0596469,0.419264,0.122476,0.108872,0.11002,0.26144,0.0286025,0.549354,0.144567,0.038848,0.0874516,0.0550279,0.144067,0.253693,0.217069,0.190048,0.131088,0.394069,0.0306378,0.286988,0.0761239,0.172491,0.0818785,0.182701,0.0637246,0.011488,0.141463,0.167267,0.140622,0.0889592,0.309588,0.28711,0.0473033,0.094881,0.118532,0.132886,0.0774373,0.109194,0.128564,0.131452,0.323837,0.120459,0.051838,0.0993999,0.0500365,0.061829,0.0755121,0.0936516,0.144075,0.0340203,0.0741807,0.00447267,0.047822,0.655293,0.21727,0.289306,0.119215,0.192475,0.177967,0.547859,0.057571,0.047591,0.392974,0.0608699,0.175319,0.300597,0.0713214,0.223874,0.291114,0.0355833,0.125606,0.175094,0.696435,0.145116,0.206454,0.218192,0.108277,0.0673484,0.108748,0.0494066,0.0958493,0.205732,0.0755808,0.045654,0.110216,0.070276,0.226171,0.153469,0.0376916,0.13262,0.0450031,0.0539144,0.114242,0.0929549,0.172425,0.104948,0.221645,0.057168,0.234298,0.0759837,0.00500888,0.152372,0.194941,0.0257725,0.101607,0.327067,0.172982,0.340936,0.151597,0.0626744,0.191335,0.148574,0.15663,0.155821,0.0718905,0.0919008,0.0602373,0.144304,0.15063,0.0973823,0.15503,0.170295,0.193653,0.137219,0.228144,0.0346616,0.288096,0.11903,0.0838874,0.331451,0.113145,0.112651,0.186638,0.174776,0.0948451,0.264079,0.249049,0.140533,0.0997756,0.257598,0.103667,0.113069,0.025556,0.16791,0.09066,0.585505,0.166967,0.188651,0.0813902,0.184948,0.156261,0.0065917,0.511859,0.0590944,0.247324,0.178389,0.218229,0.231073,0.0972686,0.619906,0.0360851,0.412187,0.131093,0.0434602,0.133616,3.65721e-10,0.36927,0.449036,0.407369,0.231447,0.18653,0.43956,0.37006,0.42622,0.448797,0.197484,0.396996,0.36145,0.0966095,0.381071,0.580441,0.276075,0.00272579,0.366326,0.390366,0.48809,0.50058,0.443185,0.522904,0.158867,0.0572701,0.227104,0.166658,0.617852,0.38649,0.284625,0.504757,0.55194,0.375373,0.28907,0.164197,0.462688,0.287881,0.0556235,0.478174,0.336276,0.468444,0.258219,0.446557,0.243383,0.777351,0.0889613,0.382874,0.683217,0.161598,0.405056,0.0868402,0.0323708,0.799185,0.37357,0.78509,0.138234,0.0201095,0.399222,0.771991,0.20342,0.200493,0.20558,0.300504,0.25656,0.425963,0.349197,0.383291,0.156104,0.141318,0.411941,0.0961477,0.314438,0.354789,0.163828,0.230581,0.120226,0.28424,0.0513026,0.314429,0.181415,0.282286,0.0674279,0.0727621,0.408413,0.516511,0.322213,0.28903,0.33942,0.243065,0.387276,0.169614,0.00640674,0.180745,0.222037,0.416621,0.416292,0.462712,0.734551,0.057399,0.204817,0.452428,0.138871,0.673493,0.166905,0.19783,0.0833851,0.316453,0.48065,0.175199,0.332919,0.373557,0.170369,0.408861,0.365487,0.178743,0.39088,0.0758087,0.236011,0.203486,0.000336234,0.375787,0.119167,0.351067,0.275347,0.0830022,0.305885,0.241132,0.371414,0.30666,0.303709,0.495883,0.386538,0.508064,0.250964,0.383276,0.125961,0.504711,0.220231,0.509064,0.196976,0.191517,0.463751,0.601877,0.307334,0.459728,0.283463,0.0517073,0.472935,0.399569,0.273281,0.368095,0.275089,0.384593,0.47795,0.359231,0.339729,0.197805,0.0690807,0.387069,0.332774,0.52832,0.299887,0.634365,0.205413,0.17639,0.0779009,0.276869,0.205298,0.0337138,0.18966,0.258854,0.188263,0.0719199,0.264884,0.162568,0.19104,0.163057,0.219428,0.208013,0.0900729,0.0953646,0.166124,0.252184,0.378361,0.255516,0.20753,0.447185,0.179412,0.193601,0.220904,0.222977,0.341681,0.310674,0.21801,0.198614,0.186804,0.123324,0.199468,0.0325925,0.0933115,0.12405,0.179889,0.226869,0.27872,0.0855609,0.131118,0.20837,0.247588,0.222339,0.0673329,0.20847,0.266544,0.113092,0.145701,0.229428,0.162145,0.228955,0.168748,0.0384949,0.0660995,0.0521984,0.0455518,0.268741,0.00160819,0.350452,0.154941,0.120196,0.0986735,0.108462,0.0595618,0.21593,0.158479,0.220319,0.195218,0.124213,0.259632,0.30793,0.180606,0.159884,0.257294,0.150733,0.217112,0.123917,0.0181384,0.185335,0.0723291,0.258496,0.261744,0.0223377,0.21382,0.207559,0.141867,0.193031,0.0339803,0.115972,0.0273485,0.246105,0.173026,0.200432,0.0102599,0.197112,0.240478,0.156465,0.13108,0.256963,0.222798,0.172134,0.176789,0.0969345,0.202137,0.310405,0.280943,0.218161,0.0822373,0.202065,0.106739,0.0536053,0.0537737,0.15113,0.078016,0.0407233,0.0537355,0.319922,0.261724,0.211332,0.187731,0.233626,0.189559,0.0812887,0.0981146,0.064145,0.121913,0.0638699,0.104603,0.0663259,0.0762523,0.128736,0.109171,0.04411,0.066952,0.089609,0.0367455,0.13497,0.204393,0.295769,0.286691,0.347036,0.141729,0.263159,0.255956,0.200105,0.227491,0.29837,0.253509,0.177664,0.28365,0.264413,0.131761,0.160658,0.206239,0.19924,0.28689,0.236464,0.325148,0.115817,0.0257187,0.223831,0.11528,0.194982,0.190993,0.281727,0.283218,0.249955,0.164638,0.224257,0.0935776,0.327622,0.225752,0.207791,0.0958756,0.0859274,0.316866,0.171683,0.0133429,0.271275,0.071111,0.270604,0.101021,0.222548,0.175934,0.157274,0.215705,0.252796,0.205954,0.361435|tfbs_overrepresentation_for_novel_motifs=0.699513,0.14394,0.690871,0.855819,0.641468,0.853988,0.937929,0.494933,1.23181,1.18351,0.820209,0.985163,1.11328,0.925331,0.639839,0.667627,1.17594,0.575162,0.452865,0.305559,0.69094,0.680949,0.845342,0.635379,0.743951,1.00973,0.409304,0.842925,0.645155,0.388328,1.86765,1.21459,0.534793,1.11965,0.599922,0.137917,2.47502,0.855276,0.567465,0.469078,0.598234,0.777097,0.259059,0.63803,0.461452,1.72524,0.939121,0.808003,0.69206,1.55608,1.02504,2.18821,0.893117,1.29475,1.45259,0.928548,0.650353,0.892517,0.388177,0.891404,1.25741,0.941709,1.23315,1.14672,0.961293,1.11026,1.54311,1.91674,1.2037,1.75271,0.762094,0.502203,0.333216,1.45054,1.10051,0.414196,0.396746,2.54768,1.20029,0.73687,0.459024,1.14559,0.960908,0.498519,1.39759,2.95969,0.303648,0.381882,1.053,2.0169,1.63834,1.36973,1.23218,0.543775,0.642354,0.560075,0.450952,1.27663,1.05794,0.946807,0.569121,1.22626,1.27082,1.1798,1.09802,1.90788,1.16312,0.921547,0.743661,0.622396,0.703975,1.26794,0.684398,0.830777,1.58942,0.594137,1.05469,0.794219,1.10778,0.547323,1.44203,1.0504,0.850918,0.973172,1.70203,1.12965,0.930979,2.76728,1.48578,0.561252,1.37044,0.798812,1.50051,0.969553,1.65144,0.372828,0.788803,0.843556,1.60823,2.47382,2.06967,1.57016,0.932872,1.27296,1.09989,0.883164,1.08214,2.31409,0.773313,1.33389,1.54007,0.250511,1.37083,0.481626,0.941179,1.78371,1.03563,0.624795,0.744018,0.710709,1.56892,1.35169,1.19946,0.714443,1.11698,0.960047,0.524529,0.936473,1.42224|tfbs_overrepresentation_jaspar=MA0003.1;2.61626,MA0004.1;1.93041,MA0006.1;0.639288,MA0007.1;0.804807,MA0009.1;1.3275,MA0014.1;0.758317,MA0017.1;0.686276,MA0019.1;0.990656,MA0024.1;1.21731,MA0025.1;1.46617,MA0027.1;2.95767,MA0028.1;1.58389,MA0029.1;1.23771,MA0030.1;1.22561,MA0031.1;1.15713,MA0038.1;0.94098,MA0040.1;1.24388,MA0041.1;0.847069,MA0042.1;0.810843,MA0043.1;1.32783,MA0046.1;1.31611,MA0048.1;0.341392,MA0050.1;0.81185,MA0051.1;0.936307,MA0052.1;1.24796,MA0055.1;0.190716,MA0056.1;0,MA0057.1;0.333427,MA0058.1;2.8588,MA0059.1;4.12962,MA0060.1;0.492218,MA0061.1;0.456531,MA0063.1;0,MA0066.1;2.1667,MA0067.1;1.65513,MA0068.1;0.405474,MA0069.1;1.31207,MA0070.1;1.30033,MA0071.1;0.897953,MA0072.1;1.29561,MA0073.1;0.0185922,MA0074.1;0.935474,MA0076.1;1.74184,MA0077.1;1.28751,MA0078.1;1.04495,MA0081.1;0.714712,MA0083.1;1.33535,MA0084.1;1.84562,MA0087.1;1.29304,MA0088.1;6.72819,MA0089.1;0,MA0090.1;0.751469,MA0091.1;0.829044,MA0092.1;0.785956,MA0093.1;1.55117,MA0095.1;0,MA0098.1;0,MA0100.1;0.956299,MA0101.1;0.646932,MA0103.1;0.628063,MA0105.1;0.31555,MA0106.1;0.986396,MA0107.1;0.556367,MA0108.2;1.15387,MA0109.1;0,MA0111.1;0.767139,MA0113.1;1.00436,MA0114.1;0.549955,MA0115.1;1.57693,MA0116.1;0.560723,MA0117.1;1.36676,MA0119.1;0.695578,MA0122.1;1.39371,MA0124.1;1.53432,MA0125.1;1.44766,MA0130.1;0,MA0131.1;1.06461,MA0132.1;0,MA0133.1;0,MA0135.1;1.35921,MA0136.1;0.948776,MA0139.1;0.440097,MA0140.1;0.894983,MA0141.1;0.712476,MA0142.1;1.12317,MA0143.1;1.00455,MA0144.1;0.531867,MA0145.1;0.273764,MA0146.1;1.70974,MA0147.1;1.38767,MA0148.1;0.854239,MA0149.1;0.884158,MA0062.2;0.449458,MA0035.2;0.894194,MA0039.2;1.62945,MA0138.2;1.04628,MA0002.2;0.476938,MA0137.2;0.666381,MA0104.2;2.13189,MA0047.2;0.973066,MA0112.2;0.731309,MA0065.2;0.277623,MA0150.1;0.744617,MA0151.1;0,MA0152.1;0.902317,MA0153.1;1.43021,MA0154.1;0.312019,MA0155.1;0.256269,MA0156.1;0.669101,MA0157.1;1.09377,MA0158.1;0,MA0159.1;0.565904,MA0160.1;0.871361,MA0161.1;0,MA0162.1;1.43223,MA0163.1;1.2663,MA0164.1;1.01792,MA0080.2;0.643061,MA0018.2;0.987913,MA0099.2;0.902716,MA0079.2;0.481578,MA0102.2;1.88331,MA0258.1;0.519674,MA0259.1;1.40979,MA0442.1;0}} | ||
|full_id=C2973_Mesenchymal_Alveolar_Renal_Pericytes_Hepatic_Smooth_Astrocyte | |||
|id=C2973 | |||
}} | |||
Latest revision as of 12:16, 17 September 2013
Full id: C2973_Mesenchymal_Alveolar_Renal_Pericytes_Hepatic_Smooth_Astrocyte
Phase1 CAGE Peaks
| Hg19::chr10:104192322..104192379,- | p1@CUEDC2 |
| Hg19::chr2:242447962..242447981,- | p3@STK25 |
| Hg19::chr2:242447983..242448034,- | p1@STK25 |
Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data
No results for this coexpression
Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data
No GOStat results
Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>
| Ontology term | p-value | n |
|---|---|---|
| embryonic cell | 2.52e-29 | 250 |
| mesodermal cell | 4.48e-24 | 121 |
| non-terminally differentiated cell | 1.80e-17 | 106 |
| contractile cell | 1.88e-16 | 59 |
| electrically responsive cell | 3.68e-15 | 61 |
| electrically active cell | 3.68e-15 | 61 |
| muscle cell | 3.83e-14 | 55 |
| muscle precursor cell | 4.58e-14 | 58 |
| myoblast | 4.58e-14 | 58 |
| multi-potent skeletal muscle stem cell | 4.58e-14 | 58 |
| meso-epithelial cell | 2.54e-11 | 45 |
| smooth muscle cell | 3.38e-11 | 43 |
| smooth muscle myoblast | 3.38e-11 | 43 |
| endothelial cell | 7.00e-11 | 36 |
| vascular associated smooth muscle cell | 1.41e-09 | 32 |
| lining cell | 7.95e-09 | 58 |
| barrier cell | 7.95e-09 | 58 |
| epithelial cell of nephron | 1.98e-08 | 15 |
| ectodermal cell | 3.30e-08 | 72 |
| endothelial cell of vascular tree | 3.30e-08 | 24 |
| blood vessel endothelial cell | 9.05e-08 | 18 |
| embryonic blood vessel endothelial progenitor cell | 9.05e-08 | 18 |
| kidney cortical cell | 2.77e-07 | 12 |
| renal cortical epithelial cell | 2.77e-07 | 12 |
Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data
Novel motifs
JASPAR motifs
| Motifs | -log10(p-value) |
|---|---|
| MA0003.1 | 2.61626 |
| MA0004.1 | 1.93041 |
| MA0006.1 | 0.639288 |
| MA0007.1 | 0.804807 |
| MA0009.1 | 1.3275 |
| MA0014.1 | 0.758317 |
| MA0017.1 | 0.686276 |
| MA0019.1 | 0.990656 |
| MA0024.1 | 1.21731 |
| MA0025.1 | 1.46617 |
| MA0027.1 | 2.95767 |
| MA0028.1 | 1.58389 |
| MA0029.1 | 1.23771 |
| MA0030.1 | 1.22561 |
| MA0031.1 | 1.15713 |
| MA0038.1 | 0.94098 |
| MA0040.1 | 1.24388 |
| MA0041.1 | 0.847069 |
| MA0042.1 | 0.810843 |
| MA0043.1 | 1.32783 |
| MA0046.1 | 1.31611 |
| MA0048.1 | 0.341392 |
| MA0050.1 | 0.81185 |
| MA0051.1 | 0.936307 |
| MA0052.1 | 1.24796 |
| MA0055.1 | 0.190716 |
| MA0056.1 | 0 |
| MA0057.1 | 0.333427 |
| MA0058.1 | 2.8588 |
| MA0059.1 | 4.12962 |
| MA0060.1 | 0.492218 |
| MA0061.1 | 0.456531 |
| MA0063.1 | 0 |
| MA0066.1 | 2.1667 |
| MA0067.1 | 1.65513 |
| MA0068.1 | 0.405474 |
| MA0069.1 | 1.31207 |
| MA0070.1 | 1.30033 |
| MA0071.1 | 0.897953 |
| MA0072.1 | 1.29561 |
| MA0073.1 | 0.0185922 |
| MA0074.1 | 0.935474 |
| MA0076.1 | 1.74184 |
| MA0077.1 | 1.28751 |
| MA0078.1 | 1.04495 |
| MA0081.1 | 0.714712 |
| MA0083.1 | 1.33535 |
| MA0084.1 | 1.84562 |
| MA0087.1 | 1.29304 |
| MA0088.1 | 6.72819 |
| MA0089.1 | 0 |
| MA0090.1 | 0.751469 |
| MA0091.1 | 0.829044 |
| MA0092.1 | 0.785956 |
| MA0093.1 | 1.55117 |
| MA0095.1 | 0 |
| MA0098.1 | 0 |
| MA0100.1 | 0.956299 |
| MA0101.1 | 0.646932 |
| MA0103.1 | 0.628063 |
| MA0105.1 | 0.31555 |
| MA0106.1 | 0.986396 |
| MA0107.1 | 0.556367 |
| MA0108.2 | 1.15387 |
| MA0109.1 | 0 |
| MA0111.1 | 0.767139 |
| MA0113.1 | 1.00436 |
| MA0114.1 | 0.549955 |
| MA0115.1 | 1.57693 |
| MA0116.1 | 0.560723 |
| MA0117.1 | 1.36676 |
| MA0119.1 | 0.695578 |
| MA0122.1 | 1.39371 |
| MA0124.1 | 1.53432 |
| MA0125.1 | 1.44766 |
| MA0130.1 | 0 |
| MA0131.1 | 1.06461 |
| MA0132.1 | 0 |
| MA0133.1 | 0 |
| MA0135.1 | 1.35921 |
| MA0136.1 | 0.948776 |
| MA0139.1 | 0.440097 |
| MA0140.1 | 0.894983 |
| MA0141.1 | 0.712476 |
| MA0142.1 | 1.12317 |
| MA0143.1 | 1.00455 |
| MA0144.1 | 0.531867 |
| MA0145.1 | 0.273764 |
| MA0146.1 | 1.70974 |
| MA0147.1 | 1.38767 |
| MA0148.1 | 0.854239 |
| MA0149.1 | 0.884158 |
| MA0062.2 | 0.449458 |
| MA0035.2 | 0.894194 |
| MA0039.2 | 1.62945 |
| MA0138.2 | 1.04628 |
| MA0002.2 | 0.476938 |
| MA0137.2 | 0.666381 |
| MA0104.2 | 2.13189 |
| MA0047.2 | 0.973066 |
| MA0112.2 | 0.731309 |
| MA0065.2 | 0.277623 |
| MA0150.1 | 0.744617 |
| MA0151.1 | 0 |
| MA0152.1 | 0.902317 |
| MA0153.1 | 1.43021 |
| MA0154.1 | 0.312019 |
| MA0155.1 | 0.256269 |
| MA0156.1 | 0.669101 |
| MA0157.1 | 1.09377 |
| MA0158.1 | 0 |
| MA0159.1 | 0.565904 |
| MA0160.1 | 0.871361 |
| MA0161.1 | 0 |
| MA0162.1 | 1.43223 |
| MA0163.1 | 1.2663 |
| MA0164.1 | 1.01792 |
| MA0080.2 | 0.643061 |
| MA0018.2 | 0.987913 |
| MA0099.2 | 0.902716 |
| MA0079.2 | 0.481578 |
| MA0102.2 | 1.88331 |
| MA0258.1 | 0.519674 |
| MA0259.1 | 1.40979 |
| MA0442.1 | 0 |
ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data
(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)
| TF | #promoters | Enrichment | p-value | q-value |
|---|---|---|---|---|
| ATF3#467 | 2 | 14.9754496840058 | 0.00576829454079388 | 0.0259413044630742 |
| BCLAF1#9774 | 3 | 21.6526476101218 | 9.8473954032885e-05 | 0.0013879245998975 |
| CCNT2#905 | 3 | 6.33620157696263 | 0.00393075003576489 | 0.0189007183694866 |
| CHD2#1106 | 3 | 10.3440228341169 | 0.000903370110274688 | 0.00658158848601173 |
| E2F1#1869 | 3 | 4.90738921487932 | 0.00846098534723939 | 0.0323293033578581 |
| E2F6#1876 | 3 | 5.01715573169739 | 0.0079176980688633 | 0.0320175192091228 |
| EGR1#1958 | 3 | 4.98817909481014 | 0.00805648813738344 | 0.0318837273429401 |
| ELF1#1997 | 3 | 4.25809795880754 | 0.0129517987505461 | 0.0459717546801347 |
| ESR1#2099 | 2 | 20.5124021974363 | 0.00309974157709518 | 0.0162999803922382 |
| ETS1#2113 | 3 | 9.72876092220234 | 0.00108584009258484 | 0.00759368243132903 |
| GABPB1#2553 | 3 | 7.06768383618217 | 0.00283221282541742 | 0.0153595116457457 |
| IRF1#3659 | 3 | 7.6371637535639 | 0.00224469274729724 | 0.0127541192445991 |
| MAX#4149 | 3 | 6.45255550900712 | 0.00372191383426551 | 0.0185622921033788 |
| MYC#4609 | 3 | 5.2222818716094 | 0.00702084375574015 | 0.0293006953448849 |
| NFKB1#4790 | 3 | 5.48806342419384 | 0.00604938181565543 | 0.026841336878462 |
| PAX5#5079 | 3 | 6.66956553117783 | 0.00337029099967726 | 0.0172172677418946 |
| SETDB1#9869 | 2 | 26.880017452007 | 0.00181446890796441 | 0.0108902544841615 |
| SIX5#147912 | 3 | 17.086715355459 | 0.000200406054632501 | 0.00238929314380865 |
| SP1#6667 | 3 | 5.6983813781409 | 0.00540396270171217 | 0.0245299226618618 |
| SRF#6722 | 3 | 13.7971782621678 | 0.000380661502580019 | 0.00373751120315452 |
| TFAP2A#7020 | 2 | 11.0124229153633 | 0.0105499065521556 | 0.0389873567956046 |
| TFAP2C#7022 | 3 | 10.8092286098602 | 0.000791674657575313 | 0.00612638630427594 |
| TRIM28#10155 | 3 | 18.5905250452625 | 0.000155596929725528 | 0.00196450528815333 |
| USF1#7391 | 3 | 6.36149927720796 | 0.0038840405729056 | 0.0189394580910303 |
| YY1#7528 | 3 | 4.91117074985386 | 0.00844145534180826 | 0.0327714353744373 |
| ZBTB33#10009 | 3 | 31.6647250299812 | 3.14815888737575e-05 | 0.000632776301075127 |
| ZNF143#7702 | 3 | 13.5008765522279 | 0.000406280496299717 | 0.00387502545689919 |
Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data
This analysis result is provided for C0 - C305 clusters.
