FFCP PHASE1:Hg19::chr1:198290450..198290462,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:198290450..198290462,+ | |||
|id=chr1:198290450..198290462,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.77e-10!75;CL:0002620!2.07e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0002580;1.10e-10;3!CL:0000511;2.05e-08;1!CL:0002625;2.05e-08;1!CL:0000216;2.05e-08;1!CL:0002616;2.05e-08;1!CL:0002620;1.59e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,1.41e-10,3;CL:0002616,1.18e-08,1;CL:0000511,1.27e-08,1;CL:0002625,1.27e-08,1;CL:0000216,1.27e-08,1;CL:0002620,1.99e-07,23 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.05e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;7.26e-09;1!DOID:2513;2.05e-08;1!DOID:4235;2.05e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,6.03e-09,1;DOID:4235,1.02e-08,1;DOID:2513,1.37e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;2.05e-08;1!UBERON:0001136;2.05e-08;1!UBERON:0000941;2.05e-08;1!UBERON:0001343;2.05e-08;1!UBERON:0001785;2.05e-08;1!UBERON:0002464;2.05e-08;1!UBERON:0004904;2.05e-08;1!UBERON:0001021;2.05e-08;1!UBERON:0005208;2.05e-08;1!UBERON:0004910;2.05e-08;1!UBERON:0004145;2.05e-08;1!UBERON:0005946;2.05e-08;1!UBERON:0004813;2.05e-08;1!UBERON:0005965;2.05e-08;1!UBERON:0002078;2.05e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.27e-08,1;UBERON:0001343,1.27e-08,1;UBERON:0004910,1.27e-08,1;UBERON:0005154,1.27e-08,1;UBERON:0005295,1.27e-08,1;UBERON:0004813,1.27e-08,1;UBERON:0005297,1.27e-08,1;UBERON:0005294,1.27e-08,1;UBERON:0010141,1.27e-08,1;UBERON:0005891,1.27e-08,1;UBERON:0004871,1.53e-08,8;UBERON:0002134,1.71e-08,1;UBERON:0005208,1.71e-08,1;UBERON:0005946,1.71e-08,1;UBERON:0005965,1.71e-08,1;UBERON:0002078,1.71e-08,1;UBERON:0000941,1.84e-08,1;UBERON:0001785,1.84e-08,1;UBERON:0002464,1.84e-08,1;UBERON:0004904,1.84e-08,1;UBERON:0001021,1.84e-08,1;UBERON:0003902,1.84e-08,1;UBERON:0005425,1.84e-08,1 | |||
|phase1_expression=0.908391896352783,0.642301571672949,0.422863212287913,2.00146596706261,0.446961094427288,1.74467704820074,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0.447830948479849,0,0,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0,0,0.329851300186716,0,0.426224750532694,0.290209238628584,0.56738522469114,0,0,0,0,0,0,0.632924774881769,0,0.212604299965044,0.209658645508376,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0.661044872784862,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390178042679635,0.164437904603676,0,0.289803085735052,0,0.267540828089713,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0.236777252044017,0,0,0.267440195783507,0,0,0,0,0,0,0.434539556882471,0,0,0,0,0,0,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0.56530794192401,0,0.825354125820202,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,2.98183171017191,0.506522046658319,0.397227542439656,0.573673241497627,0,0.560677600142307,0,0.24666754841716,0,0.269421344139376,0.326923806226917,0,0.576175924479999,0,0,0,0.149448680551801,0.23486899728753,0,0,0,0,0,0,0.494533858557114,0,0,0,0.125118519871964,0.277064115484183,0,0,0.300476117813194,0.113432183160021,0.89694817844431,0.640672166455702,1.48352330811693,0.300091096084402,0.824420233907511,0.515281080091258,0.558350568994769,0.168776332241266,0.584622030967192,1.00973509697646,0.644349290496095,0,1.06502877754984,1.41052937518696,0.339121184620975,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0.653638332277218,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0.570762456703795,0,0,0,0,0,0,0.16798212819886,0,0.179117045405697,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.399891964728228,0,0,2.10833939483032,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0.500170521059677,0,0,1.78428988797162,1.10391690523754,0.35142424497814,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,2.23297027036899,0.61384789315225,1.12264037773229,0.768834895534206,2.04682899626681,0.321707842287215,0,0.462629081407967,0.355123450626254,0,0,0.232420756919918,0,0.200506470303285,0,0,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,1.6068392984416,0,0,0,0,0,0.145016693914229,0.0852266274161009,0.178064071293475,0,0,0,0.10115778085555,2.32422774648643,0.31481234683064,0,0,0,0,0.55597265731176,0.143124886741991,0,0,0,0,0.42793898803392,0,0,0,0,0.353437207037059,0.202182481573316,0,0,0,0.243713489631284,1.05650146756755,0,0,0,0,0.66343897524122,0,0,0.655894752046633,0,0,0.281695602532241,0,0.196498082026242,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0.540031437238115,0,0,0,0.245040215981032,0,0,0,0.159426272728822,0,0,0,0,0.280797178113459,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0,1.53580351049616,0,0.140669416410513,0.111308705022906,0.329607748453519,0,0.19924798825107,0,0,0,0.123084805461069,1.55519793830904,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0.689486746482929,0,0,0,0,0,0.110579259931225,0,0,0.10893846351899,0,0,0.227884111694002,0,0,0,0.957003479195758,0.0915975934018623,0,0,0,0,0,0,0.167821586975843,0,0,0.210998064528027,0.326465616318295,0.141353071433941,0,0,0,0.611030144933625,0,0.123563938946503,0,0.067401132980677,0,0.234264445725339,0.182454789215666,0,0,0,0,0,0,0,0.103688191397247,0,0.330991955875499,0.313932918407225,0,0,0.554698692052555,0,0,0.0870592065804026,0.34945333648406,0,0,0,0.164230914106418,0,0.176512253383001,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,1.22313785466253,0.418411385249333,0.203996435272644,0,0.600420288709789,0.410716136675979,0,0,0,0.558564802544508,0.229160424011684,1.43574604915363,0.399358000997982,0,0,0,0.360299883542404,0,0.0787831823072236,0,0,0.196854963029498,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0.0524545881349981,0,0.179287339332845,0.191915197319445,0,0,0,0.542999601753713,2.5926644736038,0.326587360109409,0,0.082092520749339,0,0,0.146552233678082,0,0.258565912723101,0.13223260174269,0,0,0,0.157204305099666,0.414239055347196,0.496166021811951,0.197611631897944,0,0,0,0.2506898940227,0,0.327872630709804,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0.447764408660622,0.701139929541673,0.554805861502613,0.189403005275089,0.754703705257725,0,0,0.151230923763239,0.310874401165561,0.295710299979268,0,0,0,0,1.32920857278997,0,0.150257608997218,0.761610424337591,0.406870733204662,0,0.322231671127465,0.464033759878494,0.796191777397232,0.400027764663154,0,0.336749488765919,0,0,0.214441591374926,0,0,0,0.734210113519403,0.179088841081487,0.308801447160972,0.438568099157414,0.530067437837643,0.3858280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| |||
|short_description=p@chr1:198290450..198290462,+ | |||
}} |
Revision as of 23:08, 10 January 2014
Short description: | p@chr1:198290450..198290462, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr1:198290450..198290462, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 1.41e-10 | 3 |
perirenal adipocyte cell | 1.18e-08 | 1 |
androgen binding protein secreting cell | 1.27e-08 | 1 |
seminiferous tubule epithelial cell | 1.27e-08 | 1 |
Sertoli cell | 1.27e-08 | 1 |
skin fibroblast | 1.99e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.27e-08 | 1 |
seminiferous tubule of testis | 1.27e-08 | 1 |
epithelium of male gonad | 1.27e-08 | 1 |
epithelial cord | 1.27e-08 | 1 |
sex cord | 1.27e-08 | 1 |
seminiferous tubule epithelium | 1.27e-08 | 1 |
testis sex cord | 1.27e-08 | 1 |
genital ridge | 1.27e-08 | 1 |
primitive sex cord of indifferent gonad | 1.27e-08 | 1 |
coelomic epithelium | 1.27e-08 | 1 |
somatic layer of lateral plate mesoderm | 1.53e-08 | 8 |
tricuspid valve | 1.71e-08 | 1 |
right atrium valve | 1.71e-08 | 1 |
outflow tract of atrium | 1.71e-08 | 1 |
outflow part of right atrium | 1.71e-08 | 1 |
right cardiac atrium | 1.71e-08 | 1 |
cranial nerve II | 1.84e-08 | 1 |
cranial nerve | 1.84e-08 | 1 |
nerve trunk | 1.84e-08 | 1 |
nerve connecting eye with brain | 1.84e-08 | 1 |
nerve | 1.84e-08 | 1 |
retinal neural layer | 1.84e-08 | 1 |
presumptive neural retina | 1.84e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 6.03e-09 | 1 |
spindle cell sarcoma | 1.02e-08 | 1 |
basal cell carcinoma | 1.37e-08 | 1 |