FFCP PHASE1:Hg19::chr10:15210666..15210707,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9397 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7858 | |||
|TSSclassifier=strong | |||
|UniProt=O60551,Q5VUC6 | |||
|association_with_transcript=0bp_to_ENST00000378165,NM_004808,uc001inz.1,uc001ioa.1,uc009xjo.1_5end | |||
|description=CAGE_peak_1_at_NMT2_5end | |||
|id=chr10:15210666..15210707,- | |||
|ontology_enrichment_celltype=CL:0000222!3.56e-17!119;CL:0000213!4.92e-16!57;CL:0000215!4.92e-16!57;CL:0002139!4.64e-13!24;CL:0000115!3.79e-12!35;CL:0002078!1.00e-11!44;CL:0000071!1.11e-09!18;CL:0002546!1.11e-09!18;CL:0000055!3.18e-07!180;CL:0000076!9.90e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.17e-13;24!CL:0000115;7.98e-11;36!CL:0000071;1.01e-09;18!CL:0000213;1.36e-09;58!CL:0000215;1.36e-09;58!CL:0002078;1.37e-08;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.90e-18,121;CL:0000213,1.26e-16,58;CL:0000215,1.26e-16,58;CL:0002139,4.61e-13,24;CL:0000115,9.45e-13,36;CL:0002078,2.72e-12,45;CL:0000071,1.11e-09,18;CL:0002546,1.11e-09,18;CL:0000057,5.64e-07,76 | |||
|ontology_enrichment_development_v019=CL:0002546;1.01e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!3.51e-20!286;UBERON:0004111!3.91e-18!241;UBERON:0000025!1.03e-16!194;UBERON:0002049!8.03e-16!79;UBERON:0007798!8.03e-16!79;UBERON:0000119!3.59e-15!312;UBERON:0000055!1.09e-14!69;UBERON:0000483!1.89e-14!309;UBERON:0001981!5.09e-12!60;UBERON:0007500!5.09e-12!60;UBERON:0004537!5.09e-12!60;UBERON:0006965!5.09e-12!60;UBERON:0000153!1.14e-11!129;UBERON:0007811!1.14e-11!129;UBERON:0000475!1.48e-11!365;UBERON:0003914!2.55e-11!118;UBERON:0000490!4.13e-11!138;UBERON:0004535!5.10e-11!110;UBERON:0000033!5.17e-11!123;UBERON:0000955!1.09e-10!69;UBERON:0006238!1.09e-10!69;UBERON:0001049!1.20e-10!57;UBERON:0005068!1.20e-10!57;UBERON:0006241!1.20e-10!57;UBERON:0007135!1.20e-10!57;UBERON:0001009!1.36e-10!113;UBERON:0003075!1.45e-10!86;UBERON:0007284!1.45e-10!86;UBERON:0002616!5.13e-10!59;UBERON:0001986!1.11e-09!18;UBERON:0004638!1.11e-09!18;UBERON:0004852!1.11e-09!18;UBERON:0001017!1.58e-09!82;UBERON:0004872!2.23e-09!84;UBERON:0005743!3.38e-09!86;UBERON:0006914!4.15e-09!25;UBERON:0003056!6.77e-09!61;UBERON:0002346!7.05e-09!90;UBERON:0003080!8.55e-09!42;UBERON:0000487!8.96e-09!22;UBERON:0000073!1.37e-08!94;UBERON:0001016!1.37e-08!94;UBERON:0002020!1.58e-08!34;UBERON:0003528!1.58e-08!34;UBERON:0002780!2.24e-08!41;UBERON:0001890!2.24e-08!41;UBERON:0006240!2.24e-08!41;UBERON:0000481!3.52e-08!347;UBERON:0001869!4.14e-08!32;UBERON:0001893!9.20e-08!34;UBERON:0002791!9.78e-08!33;UBERON:0001637!1.32e-07!42;UBERON:0003509!1.32e-07!42;UBERON:0004572!1.32e-07!42;UBERON:0002619!8.28e-07!22;UBERON:0000956!9.07e-07!25;UBERON:0000203!9.07e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.01e-09;18!UBERON:0001986;1.01e-09;18!UBERON:0004852;1.01e-09;18!UBERON:0006914;3.53e-09;25!UBERON:0000487;7.23e-09;22!UBERON:0000055;4.92e-08;65!UBERON:0002049;1.24e-07;75!UBERON:0007798;1.24e-07;75!UBERON:0003528;1.83e-07;34!UBERON:0002020;1.83e-07;34!UBERON:0007500;2.06e-07;56!UBERON:0001981;2.06e-07;56!UBERON:0004537;2.06e-07;56!UBERON:0001869;2.14e-07;32!UBERON:0002791;2.20e-07;32!UBERON:0000956;8.66e-07;25!UBERON:0000203;8.66e-07;25!UBERON:0001893;8.77e-07;34!UBERON:0002619;8.83e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,6.52e-18,240;UBERON:0000025,3.41e-16,192;UBERON:0002049,2.05e-15,78;UBERON:0007798,2.05e-15,78;UBERON:0000119,3.40e-15,309;UBERON:0000483,1.80e-14,306;UBERON:0000055,2.77e-14,68;UBERON:0010314,1.20e-12,132;UBERON:0007500,1.26e-11,59;UBERON:0001981,1.26e-11,59;UBERON:0004537,1.26e-11,59;UBERON:0006965,1.26e-11,59;UBERON:0003914,3.45e-11,117;UBERON:0003075,3.62e-11,82;UBERON:0007284,3.62e-11,82;UBERON:0004535,1.08e-10,109;UBERON:0000490,2.41e-10,148;UBERON:0000955,2.67e-10,68;UBERON:0006238,2.67e-10,68;UBERON:0001009,2.84e-10,112;UBERON:0001049,3.11e-10,56;UBERON:0005068,3.11e-10,56;UBERON:0006241,3.11e-10,56;UBERON:0007135,3.11e-10,56;UBERON:0000073,7.16e-10,53;UBERON:0002616,7.16e-10,53;UBERON:0004638,1.11e-09,18;UBERON:0001986,1.11e-09,18;UBERON:0004852,1.11e-09,18;UBERON:0002346,2.29e-09,86;UBERON:0001017,3.58e-09,81;UBERON:0006914,4.13e-09,25;UBERON:0004872,4.74e-09,83;UBERON:0000487,8.92e-09,22;UBERON:0003056,9.73e-09,61;UBERON:0003528,1.58e-08,34;UBERON:0002020,1.58e-08,34;UBERON:0001016,1.58e-08,89;UBERON:0002780,2.23e-08,41;UBERON:0001890,2.23e-08,41;UBERON:0003080,2.23e-08,41;UBERON:0006240,2.23e-08,41;UBERON:0001869,4.12e-08,32;UBERON:0002791,4.93e-08,32;UBERON:0001893,9.16e-08,34;UBERON:0001637,1.32e-07,42;UBERON:0003509,1.32e-07,42;UBERON:0004572,1.32e-07,42;UBERON:0002619,8.26e-07,22;UBERON:0000956,9.04e-07,25;UBERON:0000203,9.04e-07,25 | |||
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| |||
|short_description=p1@NMT2 | |||
}} |
Revision as of 01:52, 11 January 2014
Short description: | p1@NMT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NMT2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000378165, NM_004808, uc001inz.1, uc001ioa.1, uc009xjo.1_5end |
EntrezGene: | NMT2 |
HGNC: | 7858 |
UniProt: | O60551Q5VUC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.90e-18 | 121 |
lining cell | 1.26e-16 | 58 |
barrier cell | 1.26e-16 | 58 |
endothelial cell of vascular tree | 4.61e-13 | 24 |
endothelial cell | 9.45e-13 | 36 |
meso-epithelial cell | 2.72e-12 | 45 |
blood vessel endothelial cell | 1.11e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.11e-09 | 18 |
fibroblast | 5.64e-07 | 76 |