FFCP PHASE1:Hg19::chr10:17273781..17273794,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1573 | |||
|description=CAGE_peak_at_chr10:17273781..17273794,+ | |||
|id=chr10:17273781..17273794,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.21e-27!140;CL:0000766!3.67e-27!76;CL:0002057!3.65e-26!42;CL:0002009!4.77e-26!65;CL:0000557!5.13e-26!71;CL:0002194!3.19e-25!63;CL:0000576!3.19e-25!63;CL:0000040!3.19e-25!63;CL:0000559!3.19e-25!63;CL:0000860!2.23e-24!45;CL:0000839!2.85e-24!70;CL:0002087!9.63e-24!119;CL:0002320!8.51e-23!365;CL:0000134!1.00e-22!358;CL:0002031!1.23e-22!124;CL:0000048!1.88e-21!430;CL:0000219!5.81e-21!390;CL:0000034!2.85e-20!444;CL:0000723!8.24e-20!436;CL:0000037!1.55e-16!172;CL:0000566!1.55e-16!172;CL:0000988!1.12e-15!182;CL:0002032!1.47e-14!165;CL:0000837!1.47e-14!165;CL:0000763!4.98e-13!112;CL:0000049!4.98e-13!112;CL:0002371!8.51e-12!591;CL:0000144!1.79e-10!625;CL:0000003!1.07e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.16e-28;33!CL:0002057;1.16e-28;33!CL:0000473;8.38e-24;39!CL:0000234;8.38e-24;39!CL:0000576;2.48e-20;48!CL:0000766;4.43e-17;69!CL:0002087;3.90e-09;104!CL:0000738;8.60e-09;136!CL:0002393;2.97e-07;6!CL:0002397;2.97e-07;6!CL:0000219;7.97e-07;193!CL:0000763;8.36e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.34e-40,42;CL:0002057,2.34e-40,42;CL:0000473,3.06e-40,48;CL:0000234,3.06e-40,48;CL:0000766,2.23e-38,72;CL:0000557,5.70e-37,67;CL:0002009,8.86e-37,61;CL:0000738,5.34e-36,136;CL:0002194,1.73e-35,59;CL:0000576,1.73e-35,59;CL:0000040,1.73e-35,59;CL:0000559,1.73e-35,59;CL:0000839,8.18e-35,66;CL:0002087,3.98e-32,115;CL:0002031,4.52e-31,120;CL:0000134,1.90e-28,354;CL:0002320,5.96e-27,361;CL:0000037,6.80e-25,168;CL:0000219,7.60e-25,386;CL:0000988,1.81e-24,177;CL:0000048,6.38e-24,427;CL:0000034,1.84e-23,441;CL:0002032,2.84e-23,161;CL:0000837,2.84e-23,161;CL:0000723,7.05e-23,433;CL:0000763,2.96e-22,108;CL:0000049,2.96e-22,108;CL:0002393,1.78e-09,9;CL:0002397,1.78e-09,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.45e-28;42!CL:0000049;9.34e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.61e-27!102;UBERON:0003061!8.61e-27!102;UBERON:0002371!1.72e-26!80;UBERON:0001474!2.82e-26!86;UBERON:0004765!8.30e-26!101;UBERON:0001434!8.30e-26!101;UBERON:0002193!3.47e-25!112;UBERON:0002384!2.59e-23!375;UBERON:0002204!8.68e-18!167;UBERON:0002405!1.71e-15!115;UBERON:0003081!4.39e-12!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.64e-35,76;UBERON:0002390,3.88e-33,98;UBERON:0003061,3.88e-33,98;UBERON:0001474,1.18e-32,82;UBERON:0002193,5.57e-30,108;UBERON:0002405,2.76e-28,93;UBERON:0004765,1.03e-27,90;UBERON:0001434,1.10e-27,100;UBERON:0002384,3.22e-26,371;UBERON:0003081,1.68e-16,203;UBERON:0002204,1.54e-15,167;UBERON:0000926,2.53e-10,315;UBERON:0004120,2.53e-10,315;UBERON:0006603,2.53e-10,315 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0,0,0,0,0.522371256399677,0,0,0,0,0.866364470720326,0.331397375727916,0.672325146451775,1.20538905604795,1.46062018077475,1.46379839637152,0.123121058076788,0.204000691244253,0.626909442956176,1.43117993565528,2.46373965131192,2.63639543149086,0,0.0821005894499457,0,12.194292582316,20.7267874972495,13.1593704818665,0,0,0,0,0,6.45920966536664,71.4654077006122,59.7622453461022,81.3790765184444,0.223915474239924,0.647787332037959,0.257575567634187,5.08893835728477,1.88937971844405,2.42584061187816,13.248455103624,6.16751832032739,6.19412741790207,19.5630826779062,12.2957139133968,11.1146648047635,29.9928742240858,8.39130088658974,16.251178391321,11.1062980330137,3.27487380069415,6.74170453335254,41.6274093624427,12.5162320559677,20.4587880255693,5.27762080298746,4.3882004676759,3.83602275479425,25.828622237944,3.40431134814684,6.22822248995575,24.1198718646474,12.5155900420848,6.73285418585862,12.7133895553007,6.62899744777616,15.5066569846033,2.32380814943136,3.61427309940574,5.2414661377094,1.90958672949042,5.70672192797724,2.89306056054744,6.55529310604872,2.78483348078726,2.37463399894024,0,1.63841583378639,0.889509253863555,2.98711155796555,0.400395987036012,0,0.661044872784862,0,7.39976859842283,5.87237189370939,2.29363936875137,2.64342657158052,1.68152568894461,2.89722493252585,7.86839080455332,23.5806457649499,13.7753004329671,0.167186495390678,0.32592226663359,0.946895611469467,1.94826728407911,0.111410456885174,0.294605907474837,0.886135578334485,0.270803863765016,0.896639238079726,2.08094956095805,0.328875809207352,1.10540007114339,0.869409257205157,0.889719378972363,0,2.09071047609954,0.113309342697566,1.91610246800961,0.34362744548263,1.26509846009751,0.637130828648193,0,0,0.602300476311091,0.383959833463255,0,0.236777252044017,1.64225599384209,20.9671012953722,53.4880391567015,21.2891873707715,12.1903433156981,0.670700859703636,0.255725123687061,1.44575660953827,0,0.724232594804119,0,1.94653948121054,2.6469748805939,3.1042115644759,2.54720878510066,0.196468613246569,0,0,1.29818957461873,0.870648686496336,2.12732736830184,4.29283123749616,0.571994910780128,0.74291500265913,0.79504962946682,0,0.347140501607594,0.56530794192401,0.419499436209906,0.275118041940067,0,2.06733407335463,0.35576626268671,0,2.01414658554573,0,1.22031028774085,0.735326160691737,1.62028389576352,1.42879565254528,0.44905874525234,0.112611480483322,0,0,0.366403487860815,1.31780417436063,11.6334079244498,0,3.47880366186723,1.39293562831038,4.63432132846266,2.0078563452417,0.709336764396714,0,0,0.49333509683432,0,0.404132016209064,0.817309515567294,0.151357427644931,1.15235184896,0,0.624320153660641,0,0.597794722207204,1.05691048779388,2.10434827678571,1.12360645361799,1.22492502752936,4.05353247128834,0.826606249406124,0,0.989067717114227,0,0.718618141816238,2.18836948140286,1.62654075833553,0.277064115484183,1.75591048352335,1.83892677479412,0.751190294532984,1.02088964844019,3.22901344239952,0.213557388818567,0.635795703478686,2.40072876867522,0.618315175430633,1.54584324027377,0.18611685633159,10.2953562667172,0.292311015483596,3.02920529092937,1.01254888506529,0,3.19508633264953,1.30977727695932,1.18692414617341,0.193260853163297,0.272746120590835,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0.643240938192885,0,6.03678306441573,2.16563844500876,0.354920400119532,0,0.241011029883482,0.441175890929576,0.217879444092406,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0.882926198829301,0,0.343135620597051,0,0,0,0.0925884451585296,0,0,0,1.15930404975077,0.117408694235822,0.288732895522148,3.24089858803628,0.761016608938393,0,0,0.984868024349589,0.468008530278475,1.48631162288728,0,0,0.141775097242386,0.0895585227028483,0.290633938513962,0,0,0.704387472105808,7.87846839054934,9.80015683235338,11.9930311755061,0.444485260045183,0,0,0,0.925447434329912,0.901029173531752,0.285826432630578,0,0,0.2933531432838,2.45616259939778,0,0.845302752556,0.531876233169741,0,0.514414748524284,0,0.266422179016099,0.285955987316295,0.542621605391443,0.823240336780769,2.28015329005615,1.77695974371273,2.37585561880029,0.602878754119172,0,0.499864955910285,2.43247561282381,1.50677127429638,10.5416969741516,0.958499421966331,0,1.42636905040718,1.30303176000821,1.02738161275192,0.716243852959582,0.336255431980582,17.7327684181734,50.456852517127,31.1873578159789,0.508189248444927,0,0,0,1.91381625495949,0.749007023947182,0,0,0.613457458595699,0.500170521059677,0.271265023699736,4.36738809214695,4.28229573113188,2.20783381047509,1.17141414992713,0.300946099727719,0,0,0,0.184369168541703,2.43274120510632,0,0.343143423810856,2.89475236572042,22.4342768851361,5.01619521676188,0,0,0.30239029332968,0.248107807818777,2.30192959932094,0.561320188866147,0.256278298511402,0,0.64341568457443,0,0.616838775210622,0.710246901252508,1.06765302817952,0.519254429183621,1.51073491997947,0.120859449591622,0.802025881213139,0,1.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| |||
|short_description=p@chr10:17273781..17273794,+ | |||
}} |
Revision as of 01:58, 11 January 2014
Short description: | p@chr10:17273781..17273794, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:17273781..17273794, + |
Coexpression cluster: | C1573_CD14_CD8_Natural_Peripheral_CD4_Basophils_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.34e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.34e-40 | 42 |
defensive cell | 3.06e-40 | 48 |
phagocyte | 3.06e-40 | 48 |
myeloid leukocyte | 2.23e-38 | 72 |
granulocyte monocyte progenitor cell | 5.70e-37 | 67 |
macrophage dendritic cell progenitor | 8.86e-37 | 61 |
leukocyte | 5.34e-36 | 136 |
monopoietic cell | 1.73e-35 | 59 |
monocyte | 1.73e-35 | 59 |
monoblast | 1.73e-35 | 59 |
promonocyte | 1.73e-35 | 59 |
myeloid lineage restricted progenitor cell | 8.18e-35 | 66 |
nongranular leukocyte | 3.98e-32 | 115 |
hematopoietic lineage restricted progenitor cell | 4.52e-31 | 120 |
mesenchymal cell | 1.90e-28 | 354 |
connective tissue cell | 5.96e-27 | 361 |
hematopoietic stem cell | 6.80e-25 | 168 |
motile cell | 7.60e-25 | 386 |
hematopoietic cell | 1.81e-24 | 177 |
multi fate stem cell | 6.38e-24 | 427 |
stem cell | 1.84e-23 | 441 |
hematopoietic oligopotent progenitor cell | 2.84e-23 | 161 |
hematopoietic multipotent progenitor cell | 2.84e-23 | 161 |
somatic stem cell | 7.05e-23 | 433 |
myeloid cell | 2.96e-22 | 108 |
common myeloid progenitor | 2.96e-22 | 108 |
intermediate monocyte | 1.78e-09 | 9 |
CD14-positive, CD16-positive monocyte | 1.78e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.64e-35 | 76 |
hematopoietic system | 3.88e-33 | 98 |
blood island | 3.88e-33 | 98 |
bone element | 1.18e-32 | 82 |
hemolymphoid system | 5.57e-30 | 108 |
immune system | 2.76e-28 | 93 |
skeletal element | 1.03e-27 | 90 |
skeletal system | 1.10e-27 | 100 |
connective tissue | 3.22e-26 | 371 |
lateral plate mesoderm | 1.68e-16 | 203 |
musculoskeletal system | 1.54e-15 | 167 |
mesoderm | 2.53e-10 | 315 |
mesoderm-derived structure | 2.53e-10 | 315 |
presumptive mesoderm | 2.53e-10 | 315 |