FFCP PHASE1:Hg19::chr10:48601574..48601591,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:48601574..48601591,- | |||
|id=chr10:48601574..48601591,- | |||
|ontology_enrichment_celltype=CL:0000055!8.53e-32!180;CL:0000057!8.05e-19!75;CL:0000192!4.25e-15!42;CL:0000514!4.25e-15!42;CL:0000187!1.25e-13!54;CL:0000359!1.38e-13!32;CL:0002334!1.92e-13!12;CL:0000680!2.23e-12!57;CL:0000056!2.23e-12!57;CL:0000355!2.23e-12!57;CL:0000393!4.94e-12!60;CL:0000211!4.94e-12!60;CL:0000183!1.27e-11!59;CL:0000548!1.05e-09!679;CL:0000004!1.05e-09!679;CL:0000255!1.05e-09!679;CL:0000012!1.87e-09!682;CL:0000144!5.40e-09!625;CL:0000048!9.93e-09!430;CL:0000243!2.03e-08!15;CL:0000125!2.03e-08!15;CL:0000030!2.03e-08!15;CL:0000339!2.03e-08!15;CL:0002620!2.08e-08!23;CL:0002494!2.78e-08!16;CL:0000723!3.31e-08!436;CL:0000034!1.53e-07!444;CL:0002371!2.40e-07!591;CL:0000095!3.62e-07!17;CL:0000123!3.62e-07!17;CL:0000128!6.06e-07!7;CL:0000126!6.06e-07!7;CL:0000127!6.06e-07!7;CL:0002453!6.06e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002334;3.27e-16;12!CL:0000359;1.11e-08;32!CL:0002580;1.26e-07;3!CL:0002579;4.56e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,3.00e-16,12;CL:0000057,3.69e-12,76;CL:0000359,4.79e-09,32;CL:0000192,7.57e-08,43;CL:0000514,7.57e-08,43;CL:0002580,1.30e-07,3;CL:0002579,4.05e-07,3;CL:0000187,4.71e-07,55;CL:0002539,7.24e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.39e-09!14;DOID:3093!4.31e-07!11 | |||
|ontology_enrichment_disease_v019=DOID:2394;8.89e-13;14!DOID:3093;1.40e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.06e-12,14;DOID:3093,1.29e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0001637!3.44e-12!42;UBERON:0003509!3.44e-12!42;UBERON:0004572!3.44e-12!42;UBERON:0004872!2.00e-11!84;UBERON:0001134!6.40e-11!61;UBERON:0002036!6.40e-11!61;UBERON:0003082!6.40e-11!61;UBERON:0002385!2.87e-10!63;UBERON:0001015!2.87e-10!63;UBERON:0000383!2.87e-10!63;UBERON:0004573!1.96e-09!33;UBERON:0004571!1.96e-09!33;UBERON:0001981!1.63e-08!60;UBERON:0007500!1.63e-08!60;UBERON:0004537!1.63e-08!60;UBERON:0006965!1.63e-08!60;UBERON:0004290!2.53e-08!70;UBERON:0004535!2.57e-08!110;UBERON:0003914!3.98e-08!118;UBERON:0002049!4.70e-08!79;UBERON:0007798!4.70e-08!79;UBERON:0001009!8.64e-08!113;UBERON:0000486!5.54e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.65e-08;6!UBERON:0002358;3.65e-08;6!UBERON:0003684;3.65e-08;6!UBERON:0001178;3.65e-08;6!UBERON:0001135;4.58e-07;15!UBERON:0004573;9.67e-07;33!UBERON:0004571;9.67e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.28e-09,42;UBERON:0003509,1.28e-09,42;UBERON:0004572,1.28e-09,42;UBERON:0003688,5.11e-08,6;UBERON:0002358,5.11e-08,6;UBERON:0003684,5.11e-08,6;UBERON:0001178,5.11e-08,6;UBERON:0004573,1.42e-07,33;UBERON:0004571,1.42e-07,33;UBERON:0001135,3.47e-07,15;UBERON:0004237,7.24e-07,10;UBERON:0004695,7.24e-07,10;UBERON:0002111,7.24e-07,10;UBERON:0004178,7.24e-07,10;UBERON:0004872,8.42e-07,83 | |||
|phase1_expression=2.18014055124668,0.856402095563933,1.26858963686374,1.0007329835313,0,0.872338524100369,0,0,0,0.737201809504527,0,0,0,0,0,0,1.80808358407193,0.730310090387373,0,1.84681587115182,1.22400414746552,0.313454721478088,1.43117993565528,0.821246550437305,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,1.13362783106643,0,0,0.411167888021826,0.929119112685311,0,0,0,0,0,1.35426486594342,0,1.36453075028923,0.674170453335254,0,0.320929027076094,0,0,0,0,0,1.13477044938228,0,0.251248665256743,0,0.434377689410233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.511450247374121,0,0,0,0,0,0.378139268656271,1.33037638477538,3.51339142772504,0.0654895377488563,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97577561356255,2.78587125662075,7.15009576391382,0.573673241497627,0,0.560677600142307,17.0798393167528,5.67335361359468,1.24484414159907,0.538842688278752,0.817309515567294,0.605429710579726,0.576175924479999,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,1.92834711372036,0.89694817844431,0.213557388818567,0.211931901159562,1.20036438433761,0.92747276314595,1.54584324027377,0.744467425326359,2.36286865137773,2.92311015483596,3.78650661366172,1.56484827691909,0,3.19508633264953,1.5112814734146,0.508681776931463,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,0,0,3.17003474436719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0.43596006883328,1.1734125731352,20.94201795276,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0.791951872933429,1.80863626235752,0.871533458600294,1.59956785891291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,4.64957918974806,0.553107505625109,0,0,0,0,0,0,0,0,0,5.45837177201309,15.0392733822301,6.17452207752762,1.53766979106841,7.67560873600055,9.00781958404202,1.48418066444991,2.46735510084249,4.6166048581413,0.0821271560138091,9.34657972530518,0.232420756919918,0,0.200506470303285,0,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0.574265537996172,0,1.6068392984416,0.290012154876366,0,0,0,0,0,0,1.78064071293475,0,0,0,0,6.507837690162,11.6480568327337,1.3940745403212,0,4.7907542728532,1.73986598415015,0,0.429374660225974,0,0,0,0,0,1.59101623962968,0.78494864019923,0,1.64722217841633,1.17812402345686,3.03273722359974,0,7.16139375606268,0,0.487426979262569,0,0.682499557039929,0.848432591722276,1.13008116620243,3.85955740482287,2.65375590096488,0.876901770507525,0,0.655894752046633,0.811641507850816,0.92947049429925,4.22543403798362,0.573645408816206,0.88424136911809,2.1400263088875,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83031449570902,0,0,0,0,0,0,0,0,0,0,0,4.09074730008619,0,2.17727711363265,0.539210106883961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.78556634557405,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0.313932918407225,1.19472429772959,0,0,0,0.0979923974143777,0.174118413160805,0,0,0,0,0,0,0,0,10.8263120470933,0.596143835108969,0,0,2.48492342779755,0,0,0,0,0,0,0.124252535565433,0,1.22313785466253,0.941425616810999,0.305994652908965,1.73370353940911,0,0,0,0,0,0,0,0,0,0,0,0,8.28689732147528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6896053843105,0,0,0,0,0,0,5.18532894720761,0.326587360109409,0,0,5.79319274070434,1.47305718976163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.24855018919589,0,0,18.8212655758537,0,0,0.298509605773748,1.16856654923612,0,0,0,0,0,0,5.90661362214566,0.443565449968902,1.11507737014592,0,4.81315166316404,2.48823724704513,10.6336685823198,2.60872530905867,7.3626228408637,7.61610424337591,3.25496586563729,0.181848659202559,1.71856891267982,0,1.19428766609585,0,2.06037423109676,2.02049693259551,0,0,0,0,2.94717703165954,19.6794103175259,0,18.8043283135562,0,0,0.353378291891762,0.38582807654183,0,0,0,0.303859956177382,0,0,0,0,0,0,2.11312123358627,0,0,0,1.13503190713367,0.184105950251841,0,0,0,0,0,0,0,0,0,0,2.54403480522735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.0204378557429,0,0,3.42898616795984,0,0,1.31017534008077,1.47856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0,0.556157009460346,0,0,0,0,0.431855182437243,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92788632594669,0,0,0,0,2.82315897372553,0,0,0,0,0,0,0,0,0.743990036333503,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87227517805241,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:48601574..48601591,- | |||
}} |
Revision as of 02:44, 11 January 2014
Short description: | p@chr10:48601574..48601591, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:48601574..48601591, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 3.00e-16 | 12 |
fibroblast | 3.69e-12 | 76 |
vascular associated smooth muscle cell | 4.79e-09 | 32 |
smooth muscle cell | 7.57e-08 | 43 |
smooth muscle myoblast | 7.57e-08 | 43 |
preadipocyte of the breast | 1.30e-07 | 3 |
omentum preadipocyte | 4.05e-07 | 3 |
muscle cell | 4.71e-07 | 55 |
aortic smooth muscle cell | 7.24e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
artery | 1.28e-09 | 42 |
arterial blood vessel | 1.28e-09 | 42 |
arterial system | 1.28e-09 | 42 |
omentum | 5.11e-08 | 6 |
peritoneum | 5.11e-08 | 6 |
abdominal cavity | 5.11e-08 | 6 |
visceral peritoneum | 5.11e-08 | 6 |
systemic artery | 1.42e-07 | 33 |
systemic arterial system | 1.42e-07 | 33 |
smooth muscle tissue | 3.47e-07 | 15 |
blood vessel smooth muscle | 7.24e-07 | 10 |
arterial system smooth muscle | 7.24e-07 | 10 |
artery smooth muscle tissue | 7.24e-07 | 10 |
aorta smooth muscle tissue | 7.24e-07 | 10 |
splanchnic layer of lateral plate mesoderm | 8.42e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.06e-12 | 14 |
nervous system cancer | 1.29e-07 | 11 |