FFCP PHASE1:Hg19::chr10:102821731..102821752,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81621 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25460 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-8bp_to_ENST00000477979_5end | |||
|description=CAGE_peak_1_at_KAZALD1_5end | |||
|id=chr10:102821731..102821752,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.41e-27!180;CL:0000057!3.35e-14!75;CL:0000680!6.91e-13!57;CL:0000056!6.91e-13!57;CL:0000355!6.91e-13!57;CL:0000187!1.49e-11!54;CL:0000183!6.78e-11!59;CL:0000393!1.90e-09!60;CL:0000211!1.90e-09!60;CL:0000192!2.62e-08!42;CL:0000514!2.62e-08!42;CL:0000499!3.20e-08!27;CL:0002334!1.07e-07!12;CL:0000153!9.02e-07!9;CL:0000447!9.02e-07!9;CL:0000327!9.99e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.40e-09;12!CL:0000153;1.62e-08;9!CL:0000447;1.62e-08;9!CL:0000499;3.72e-08;28!CL:0000188;9.75e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.68e-13,76;CL:0000680,6.66e-12,58;CL:0000056,6.66e-12,58;CL:0000355,6.66e-12,58;CL:0000187,2.29e-10,55;CL:0002334,1.54e-09,12;CL:0000153,2.43e-08,9;CL:0000447,2.43e-08,9;CL:0000393,3.01e-08,61;CL:0000211,3.01e-08,61;CL:0000499,4.71e-08,28;CL:0000192,6.98e-07,43;CL:0000514,6.98e-07,43 | |||
|ontology_enrichment_development_v019=CL:0000355;3.89e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!2.34e-14!63;UBERON:0001015!2.34e-14!63;UBERON:0000383!2.34e-14!63;UBERON:0001134!5.65e-14!61;UBERON:0002036!5.65e-14!61;UBERON:0003082!5.65e-14!61;UBERON:0000914!1.71e-12!83;UBERON:0002329!1.71e-12!83;UBERON:0003077!1.71e-12!83;UBERON:0003059!1.71e-12!83;UBERON:0007282!1.71e-12!83;UBERON:0009618!1.71e-12!83;UBERON:0007285!1.71e-12!83;UBERON:0004290!2.86e-12!70;UBERON:0003104!2.71e-11!238;UBERON:0009142!2.71e-11!238;UBERON:0000486!1.40e-10!82;UBERON:0000481!4.43e-10!347;UBERON:0002100!3.23e-09!216;UBERON:0004457!1.12e-07!12;UBERON:0000042!1.12e-07!12;UBERON:0005256!1.28e-07!143;UBERON:0000475!2.18e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.10e-09;9!UBERON:0000042;2.10e-09;9!UBERON:0001134;2.16e-08;16!UBERON:0002036;2.16e-08;16!UBERON:0004905;2.37e-08;8!UBERON:0000982;2.37e-08;8!UBERON:0004770;2.37e-08;8!UBERON:0002204;5.79e-08;70!UBERON:0002385;7.70e-08;31!UBERON:0001015;7.70e-08;31!UBERON:0000383;7.70e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.01e-12,62;UBERON:0002036,3.01e-12,62;UBERON:0003082,3.01e-12,62;UBERON:0002385,3.60e-12,64;UBERON:0001015,3.60e-12,64;UBERON:0000383,3.60e-12,64;UBERON:0007524,1.87e-10,73;UBERON:0002329,3.39e-10,71;UBERON:0003059,3.39e-10,71;UBERON:0007282,3.39e-10,71;UBERON:0004290,3.39e-10,71;UBERON:0009618,3.39e-10,71;UBERON:0003077,7.18e-10,72;UBERON:0007285,7.18e-10,72;UBERON:0004457,7.86e-10,12;UBERON:0000042,7.86e-10,12;UBERON:0000486,9.15e-10,83;UBERON:0003104,7.44e-09,160;UBERON:0009142,7.44e-09,160;UBERON:0004905,2.47e-08,8;UBERON:0000982,2.47e-08,8;UBERON:0004770,2.47e-08,8;UBERON:0007503,3.96e-08,78;UBERON:0005256,2.64e-07,122 | |||
|phase1_expression=14.1709135831034,8.77812147953031,13.5316227932132,20.0146596706261,9.38618298297304,25.2978171989107,0,0,2.87304191019822,0.245733936501509,0,0.218441372130172,0,10.1488409427238,15.2442792834841,0.672325146451775,0,0.730310090387373,0,0.61560529038394,1.22400414746552,3.44800193625897,0,0.136874425072884,0.502170558379211,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.53435074212236,35.0595977813029,13.0347856765331,37.3704018918925,3.1811437882044,16.058950719987,0.472674085820339,1.33037638477538,1.05401742831751,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,8.94549513051573,3.79891534993739,0.926864265692532,24.3811127636492,8.86670955495893,6.72813120170769,2.1349799145941,0.49333509683432,4.04574346019696,0.404132016209064,0.980771418680752,4.38936540170301,0,1.17160715916898,1.24864030732128,0,2.83952493048422,0.352303495931295,0.323745888736263,0,0.61246251376468,1.59684612505298,1.75653827998801,1.18800285728205,3.70900393917835,0,0.718618141816238,0.673344455816265,0.625592599359821,0,1.31693286264251,5.21029252858333,3.90618953157152,0.680593098960126,4.30535125653269,4.27114777637135,2.33125091275518,6.60200411385685,2.16410311400722,3.86460810068444,2.23340227597908,8.77636927654584,10.6206335625707,4.29137416214995,2.30124746605748,26.671599375104,2.84007674013291,1.41052937518696,2.88253006927829,0,0,0,0,0,0.232387885739037,0.829288440122964,0,0,0,0.643240938192885,0,2.3218396401599,5.0531563716871,2.60274960087657,2.52877035117153,2.6511213287183,1.98529150918309,1.74303555273925,1.89816495288877,3.50561401216427,2.35465758150415,3.8474715694639,0,0,1.6462960453256,4.41026134156626,0,0,0,0,1.22988438543114,0.514703430895577,0,0,0,0,0.651616610620649,1.03993478527958,0,0.115930404975077,0.70445216541493,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336393253036082,0.87192013766656,0.22001485746285,0.258543431515556,21.4593867511129,0,0.797814349754612,1.04007436911366,3.08648849114571,7.09245660116391,3.46348832720929,0.285955987316295,1.08524321078289,0,0.325736184293735,0,0,0,0,0,0,0,0,0.718874566474748,3.44585807502342,4.27910715122155,8.68687840005475,9.8628634824184,3.40215830155802,0.224170287987055,0,0,0,0.254094624222463,0,0,0,0,0,0,0,15.4591279566116,20.0068208423871,4.34024037919577,3.11956292296211,2.67643483195743,4.88877486605197,9.95702027438062,18.6586581831186,31.8370505678379,32.0766521006765,7.97070718242524,3.68738337083406,3.38846096425523,1.76221041716467,2.05886054286514,0,0,0,0.303127571446259,0,0.30239029332968,21.5853792802336,18.8758227144317,29.4693099154727,21.2710987764464,16.3746319701345,7.56013429374955,51.9463232557468,1.3878872442239,1.42049380250502,5.4203922969114,2.07701771673448,7.08883308605751,1.93375119346596,0,0,3.78887678943202,4.37018803216121,6.81846957789005,0,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0.261435451024901,0,2.29610251989794,0,0.309123034943167,2.01452822600355,1.32015199872941,0,0,0,10.9237911670098,6.62409053592971,5.06562126596228,1.37836572484531,4.18938954986267,6.52575122614028,2.64202544989913,17.1831828798203,0,0,0,0,0.464845549297286,5.03699754929024,1.3940745403212,2.46426864140871,7.98459045475533,2.60979897622522,1.29726953372744,0.572499546967965,0,0.949138274156178,0.190630193923825,6.65334257409468,10.2705357128141,3.5002357271853,1.56989728039846,1.07923474549989,2.47083326762449,1.29593642580255,3.23491970517306,6.34041284692033,0,1.46290121726877,7.55511817856982,1.05650146756755,3.27599787379166,3.39373036688911,23.731704490251,8.27048015319186,15.2590964305481,6.13831239355268,12.1542862196004,13.1178950409327,0.202910376962704,4.64735247149625,4.50712964051586,0.430234056612155,0.0982490410131212,0.7133421029625,0.354761064070598,116.109199413715,68.1640428426997,2.27683904259429,2.0996083214699,0,0.670302275535787,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,9.50734233034511,5.77487913158015,0.490080431962063,0,0.144269212976445,0.569134746787313,0,0,0.191505370132367,0.635020748171649,0,0,4.79292825969704,0,5.01268954180134,3.38583555603207,0,0,0,0,0,0,0.166849141711909,2.73543333562856,0,1.23087398947712,0.811367035427949,0.33307196799782,0,1.49712432326576,0.879049075631364,3.51945513073589,0,0.568272293612826,0,1.48482340416319,0,0,0,0,5.10892010102955,0,5.57894367102995,1.65770349318689,0,0,0,0.311039587661807,0,0,0,1.28236427328014,0,0,0,0,0,0,1.13697999995054,0,3.41380344856499,1.01701460117107,0.472775363535873,0,0.874813840149763,0,0,0,0,0,0,1.09692698576986,3.05027697853172,0.278847488557207,5.07871706125061,0,0,0.0897576444097721,0.108647371922008,0.31900115973192,1.4655614944298,0.533034776018635,2.04386596391473,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| |||
|short_description=p1@KAZALD1 | |||
}} |
Revision as of 04:36, 11 January 2014
Short description: | p1@KAZALD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KAZALD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_ENST00000477979_5end |
EntrezGene: | KAZALD1 |
HGNC: | 25460 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.68e-13 | 76 |
muscle precursor cell | 6.66e-12 | 58 |
myoblast | 6.66e-12 | 58 |
multi-potent skeletal muscle stem cell | 6.66e-12 | 58 |
muscle cell | 2.29e-10 | 55 |
preadipocyte | 1.54e-09 | 12 |
GAG secreting cell | 2.43e-08 | 9 |
carbohydrate secreting cell | 2.43e-08 | 9 |
electrically responsive cell | 3.01e-08 | 61 |
electrically active cell | 3.01e-08 | 61 |
stromal cell | 4.71e-08 | 28 |
smooth muscle cell | 6.98e-07 | 43 |
smooth muscle myoblast | 6.98e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 3.01e-12 | 62 |
striated muscle tissue | 3.01e-12 | 62 |
myotome | 3.01e-12 | 62 |
muscle tissue | 3.60e-12 | 64 |
musculature | 3.60e-12 | 64 |
musculature of body | 3.60e-12 | 64 |
dense mesenchyme tissue | 1.87e-10 | 73 |
somite | 3.39e-10 | 71 |
presomitic mesoderm | 3.39e-10 | 71 |
presumptive segmental plate | 3.39e-10 | 71 |
dermomyotome | 3.39e-10 | 71 |
trunk paraxial mesoderm | 3.39e-10 | 71 |
paraxial mesoderm | 7.18e-10 | 72 |
presumptive paraxial mesoderm | 7.18e-10 | 72 |
cavity lining | 7.86e-10 | 12 |
serous membrane | 7.86e-10 | 12 |
multilaminar epithelium | 9.15e-10 | 83 |
mesenchyme | 7.44e-09 | 160 |
entire embryonic mesenchyme | 7.44e-09 | 160 |
articulation | 2.47e-08 | 8 |
skeletal joint | 2.47e-08 | 8 |
articular system | 2.47e-08 | 8 |
epithelial vesicle | 3.96e-08 | 78 |
trunk mesenchyme | 2.64e-07 | 122 |