FFCP PHASE1:Hg19::chr11:1905512..1905526,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=4046 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6707 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-91bp_to_ENST00000484895_5end | |||
|coexpression_cluster_id=C329 | |||
|description=CAGE_peak_8_at_LSP1_5end | |||
|id=chr11:1905512..1905526,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.08e-67!140;CL:0000037!6.82e-58!172;CL:0000566!6.82e-58!172;CL:0002087!1.53e-57!119;CL:0000988!3.16e-57!182;CL:0002032!1.64e-55!165;CL:0000837!1.64e-55!165;CL:0002031!9.10e-53!124;CL:0002057!1.55e-44!42;CL:0000860!2.57e-40!45;CL:0000766!1.09e-38!76;CL:0002009!8.01e-38!65;CL:0002194!4.31e-36!63;CL:0000576!4.31e-36!63;CL:0000040!4.31e-36!63;CL:0000559!4.31e-36!63;CL:0000763!4.00e-34!112;CL:0000049!4.00e-34!112;CL:0000557!7.43e-33!71;CL:0000839!1.10e-31!70;CL:0002320!1.98e-22!365;CL:0000134!6.20e-21!358;CL:0000542!1.61e-18!53;CL:0000051!1.61e-18!53;CL:0000838!5.12e-18!52;CL:0000219!1.74e-16!390;CL:0000048!1.92e-13!430;CL:0000723!1.04e-12!436;CL:0000034!3.63e-12!444;CL:0000451!3.99e-10!10;CL:0000084!1.18e-09!25;CL:0000827!1.18e-09!25;CL:0002393!2.19e-09!9;CL:0002397!2.19e-09!9;CL:0000791!3.16e-09!18;CL:0000789!3.16e-09!18;CL:0002420!3.16e-09!18;CL:0002419!3.16e-09!18;CL:0000790!3.16e-09!18;CL:0000990!7.34e-09!8;CL:0000094!3.03e-08!8;CL:0000945!5.07e-08!24;CL:0000826!5.07e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.37e-60;33!CL:0002057;1.37e-60;33!CL:0000473;7.61e-50;39!CL:0000234;7.61e-50;39!CL:0000576;1.58e-40;48!CL:0000766;1.70e-28;69!CL:0000738;1.54e-18;136!CL:0002087;1.27e-15;104!CL:0000763;1.38e-13;100!CL:0000453;6.29e-11;5!CL:0000451;1.49e-10;10!CL:0000990;2.19e-10;8!CL:0000988;7.84e-10;177!CL:0002393;1.60e-08;6!CL:0002397;1.60e-08;6!CL:0000775;1.38e-07;3!CL:0000219;2.02e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.95e-75,42;CL:0002057,2.95e-75,42;CL:0000473,7.74e-75,48;CL:0000234,7.74e-75,48;CL:0000738,3.11e-68,136;CL:0002009,9.04e-66,61;CL:0002194,1.51e-62,59;CL:0000576,1.51e-62,59;CL:0000040,1.51e-62,59;CL:0000559,1.51e-62,59;CL:0000766,3.65e-62,72;CL:0000557,1.21e-58,67;CL:0002087,1.51e-57,115;CL:0002031,2.20e-56,120;CL:0000839,1.67e-54,66;CL:0000037,5.23e-53,168;CL:0002032,8.40e-53,161;CL:0000837,8.40e-53,161;CL:0000988,2.78e-49,177;CL:0000763,5.98e-48,108;CL:0000049,5.98e-48,108;CL:0000134,2.37e-18,354;CL:0002320,1.34e-17,361;CL:0000219,5.84e-15,386;CL:0000048,9.11e-12,427;CL:0000723,2.49e-11,433;CL:0000453,6.86e-11,5;CL:0000034,9.07e-11,441;CL:0002393,1.00e-10,9;CL:0002397,1.00e-10,9;CL:0000451,1.62e-10,10;CL:0000990,2.04e-10,8;CL:0000775,1.28e-07,3;CL:0000838,5.64e-07,52;CL:0000542,9.06e-07,53;CL:0000051,9.06e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;6.22e-54;42!CL:0000049;6.98e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.60e-41!102;UBERON:0003061!3.60e-41!102;UBERON:0002193!6.01e-36!112;UBERON:0002371!3.75e-29!80;UBERON:0001474!1.41e-26!86;UBERON:0004765!4.86e-23!101;UBERON:0001434!4.86e-23!101;UBERON:0002405!1.59e-21!115;UBERON:0002384!3.58e-21!375;UBERON:0002204!1.63e-11!167;UBERON:0000178!8.80e-11!15;UBERON:0000179!8.80e-11!15;UBERON:0000463!8.80e-11!15;UBERON:0003081!8.23e-10!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.70e-07;15!UBERON:0000179;4.70e-07;15!UBERON:0000463;4.70e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.59e-53,98;UBERON:0003061,2.59e-53,98;UBERON:0002371,4.73e-50,76;UBERON:0002193,7.14e-47,108;UBERON:0001474,2.29e-45,82;UBERON:0002405,3.48e-40,93;UBERON:0004765,4.32e-40,90;UBERON:0001434,1.09e-34,100;UBERON:0003081,2.25e-19,203;UBERON:0002384,1.42e-16,371;UBERON:0002204,3.16e-16,167;UBERON:0000926,2.76e-07,315;UBERON:0004120,2.76e-07,315;UBERON:0006603,2.76e-07,315;UBERON:0000178,4.02e-07,15;UBERON:0000179,4.02e-07,15;UBERON:0000463,4.02e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0,0,0.382067028739756,0.57470412614962,0.157421562627358,0.786728553697808,0.383829398097213,0.928896739896456,0,0,0,0.309868802321207,0,0,0.553995408531877,2.80762226458198,1.95309783644267,0,0,0,8.86929256555345,7.17964293008738,9.46077838632483,6.50801303335917,4.93401465626191,5.26500830521676,6.04154023876516,4.86705342405291,12.533558184095,2.75796544589295,3.22742341791913,8.12558919566051,8.65914761895982,9.00590295190891,9.21366286224847,10.1007684482398,2.24650318953266,7.03270838378945,5.27762080298746,6.18337338627059,11.9342930149154,6.38460324982885,3.97169657283798,9.9651559839292,5.02497330513487,7.30076085788282,13.2485195270121,3.63239701580021,4.05105399586321,7.27863491114034,7.6051903072299,5.95292039902122,3.35453832813401,3.25753030324836,5.10601435661121,4.17886525412408,0.570025487482497,5.76858363877361,3.10529061399878,0,0,0.889509253863555,0.426730222566507,2.40237592221607,1.72425731986345,0.661044872784862,0,1.70763890732835,2.34894875748376,1.14681968437569,0,0,0.263384084775077,0.196709770113833,1.96505381374582,0.205601498999509,2.17342444007882,1.62961133316795,1.89379122293893,0,5.12488101671798,4.12448270464772,4.87374568083967,3.79125409271022,1.15282187753108,2.08094956095805,2.30213066445147,3.31620021343018,1.15921234294021,1.4828656316206,1.07016331235885,0,1.58633079776593,1.91610246800961,0.68725489096526,2.53019692019503,0.637130828648193,0,0.950452044448374,0.903450714466637,1.66382594500744,0,0.710331756132051,1.64225599384209,1.00803371612366,2.94184215361858,0.724122019413995,0,0,0,0.722878304769133,0,0,0.795285947051099,0.486634870302636,0,0,0,0.0654895377488563,0,0,0.324547393654683,1.74129737299267,1.46253756570752,0.238490624305342,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0.325808305310325,1.03993478527958,0,0,0,0,0,0,0,0,0.246217006087397,2.80805118167085,1.33768046059855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,2.71310802695722,0,0,0,0,0,0,0,0,0.502257091432126,10.5416969741516,0,0,0,0.144781306667579,0,0.537182889719687,0,1.18218456121156,0.215627574859517,0.898401253958239,0,0,0,0,0,7.49007023947182,29.9161459204025,3.72973962092432,0.12269149171914,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0,0.391602314925481,0.343143423810856,0.206768026122887,2.15714200818617,0.533637789017222,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0.308097234229289,0,0.137836572484531,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.422215270595328,0.329294892959902,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,4.05958087385735,0.764637207142375,2.84823593587081,1.66762242820452,1.64544909234478,2.59389324477087,0.540031437238115,3.96562588147135,0,0,0,0.371606350251437,0,0,0,1.1974762285969,0.957526850661834,0.846694330895531,0,0.280797178113459,0,0,0,0.677167111206413,0.1605880751037,0,0.425846237690326,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.445773537109913,0,0,0,0,0,0,0,0,0,0.19924798825107,0.828851746593443,0,0,0.246169610922139,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.617819694732514,0.939797545549098,0,0,0,2.73682183823499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8402114799552,0.558564802544508,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,1.349843349309,3.0952078182318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0.828478110694391,0,0.790446527591777,0.487170393523584,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60024988196838,0.686791410365586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1327360596482,7.44043105754833,7.85113892428052,0,0,0,0.59996218756479,0.426766918776564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0.177404740325278,0.230467975111559,0.342976018874837,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0.924351257262837,1.29787968637137,0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| |||
|short_description=p8@LSP1 | |||
}} |
Revision as of 06:04, 11 January 2014
Short description: | p8@LSP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_LSP1_5end |
Coexpression cluster: | C329_Neutrophils_CD14_Monocytederived_Whole_Peripheral_CD14CD16_Eosinophils |
Association with transcript: | -91bp_to_ENST00000484895_5end |
EntrezGene: | LSP1 |
HGNC: | 6707 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.59e-53 | 98 |
blood island | 2.59e-53 | 98 |
bone marrow | 4.73e-50 | 76 |
hemolymphoid system | 7.14e-47 | 108 |
bone element | 2.29e-45 | 82 |
immune system | 3.48e-40 | 93 |
skeletal element | 4.32e-40 | 90 |
skeletal system | 1.09e-34 | 100 |
lateral plate mesoderm | 2.25e-19 | 203 |
connective tissue | 1.42e-16 | 371 |
musculoskeletal system | 3.16e-16 | 167 |
mesoderm | 2.76e-07 | 315 |
mesoderm-derived structure | 2.76e-07 | 315 |
presumptive mesoderm | 2.76e-07 | 315 |
blood | 4.02e-07 | 15 |
haemolymphatic fluid | 4.02e-07 | 15 |
organism substance | 4.02e-07 | 15 |