FFCP PHASE1:Hg19::chr11:12132117..12132160,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9645 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24693 | |||
|TSSclassifier=strong | |||
|UniProt=O94851 | |||
|association_with_transcript=0bp_to_ENST00000256194,ENST00000531732,NM_014632,uc001mjy.2,uc001mjz.2,uc001mka.2_5end | |||
|description=CAGE_peak_1_at_MICAL2_5end | |||
|id=chr11:12132117..12132160,+ | |||
|ontology_enrichment_celltype=CL:0000222!4.92e-17!119;CL:0000055!2.88e-14!180;CL:0000359!2.99e-14!32;CL:0000183!2.50e-13!59;CL:0000187!1.23e-12!54;CL:0000192!4.20e-12!42;CL:0000514!4.20e-12!42;CL:0000680!5.09e-12!57;CL:0000056!5.09e-12!57;CL:0000355!5.09e-12!57;CL:0000057!5.55e-12!75;CL:0000220!2.17e-09!246;CL:0002321!9.51e-09!248;CL:0000393!2.23e-08!60;CL:0000211!2.23e-08!60;CL:0002494!1.77e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.73e-13;32!CL:0000192;3.64e-09;43!CL:0002494;1.74e-07;16!CL:0000187;3.43e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.93e-17,121;CL:0000359,2.98e-14,32;CL:0000187,1.22e-12,55;CL:0000057,1.72e-12,76;CL:0000192,4.42e-12,43;CL:0000514,4.42e-12,43;CL:0000680,4.92e-12,58;CL:0000056,4.92e-12,58;CL:0000355,4.92e-12,58;CL:0002321,9.27e-09,250;CL:0000393,2.37e-08,61;CL:0000211,2.37e-08,61;CL:0002494,1.77e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;3.64e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!2.77e-25!110;UBERON:0001009!5.26e-25!113;UBERON:0003914!1.14e-20!118;UBERON:0004872!3.50e-19!84;UBERON:0002049!6.99e-19!79;UBERON:0007798!6.99e-19!79;UBERON:0001637!9.01e-19!42;UBERON:0003509!9.01e-19!42;UBERON:0004572!9.01e-19!42;UBERON:0001981!3.42e-18!60;UBERON:0007500!3.42e-18!60;UBERON:0004537!3.42e-18!60;UBERON:0006965!3.42e-18!60;UBERON:0000055!3.84e-17!69;UBERON:0000025!1.33e-16!194;UBERON:0000119!3.01e-16!312;UBERON:0000483!6.35e-16!309;UBERON:0004573!2.80e-15!33;UBERON:0004571!2.80e-15!33;UBERON:0004111!2.17e-13!241;UBERON:0000467!2.50e-13!625;UBERON:0000914!2.90e-13!83;UBERON:0002329!2.90e-13!83;UBERON:0003077!2.90e-13!83;UBERON:0003059!2.90e-13!83;UBERON:0007282!2.90e-13!83;UBERON:0009618!2.90e-13!83;UBERON:0007285!2.90e-13!83;UBERON:0005256!5.65e-13!143;UBERON:0000480!5.86e-13!626;UBERON:0004290!8.59e-12!70;UBERON:0000486!1.20e-11!82;UBERON:0000468!2.39e-11!659;UBERON:0001134!2.82e-11!61;UBERON:0002036!2.82e-11!61;UBERON:0003082!2.82e-11!61;UBERON:0002385!3.44e-11!63;UBERON:0001015!3.44e-11!63;UBERON:0000383!3.44e-11!63;UBERON:0000490!7.48e-11!138;UBERON:0000477!1.10e-10!286;UBERON:0000475!1.62e-09!365;UBERON:0000947!3.24e-09!21;UBERON:0010191!3.24e-09!21;UBERON:0000923!4.61e-09!604;UBERON:0005291!4.61e-09!604;UBERON:0006598!4.61e-09!604;UBERON:0002532!4.61e-09!604;UBERON:0002050!5.45e-09!605;UBERON:0005423!5.45e-09!605;UBERON:0000481!1.03e-08!347;UBERON:0002100!1.18e-08!216;UBERON:0003081!2.79e-08!216;UBERON:0000948!4.48e-08!24;UBERON:0005498!4.48e-08!24;UBERON:0004140!4.48e-08!24;UBERON:0009881!4.48e-08!24;UBERON:0004141!4.48e-08!24;UBERON:0003084!4.48e-08!24;UBERON:0007005!4.48e-08!24;UBERON:0004139!4.48e-08!24;UBERON:0004291!4.48e-08!24;UBERON:0007100!1.24e-07!27;UBERON:0000922!1.57e-07!612;UBERON:0000926!4.22e-07!448;UBERON:0004120!4.22e-07!448;UBERON:0006603!4.22e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.86e-14;33!UBERON:0004571;7.86e-14;33!UBERON:0001637;1.09e-13;42!UBERON:0003509;1.09e-13;42!UBERON:0004572;1.09e-13;42!UBERON:0007500;8.35e-10;56!UBERON:0001981;8.35e-10;56!UBERON:0004537;8.35e-10;56!UBERON:0000947;3.24e-09;21!UBERON:0010191;3.24e-09;21!UBERON:0003914;2.45e-08;74!UBERON:0000055;1.34e-07;65!UBERON:0002049;1.51e-07;75!UBERON:0007798;1.51e-07;75!UBERON:0004535;1.99e-07;109!UBERON:0001009;3.10e-07;112!UBERON:0000948;3.56e-07;22!UBERON:0007100;9.30e-07;25 | |||
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| |||
|short_description=p1@MICAL2 | |||
}} |
Revision as of 06:39, 11 January 2014
Short description: | p1@MICAL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MICAL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000256194, ENST00000531732, NM_014632, uc001mjy.2, uc001mjz.2, uc001mka.2_5end |
EntrezGene: | MICAL2 |
HGNC: | 24693 |
UniProt: | O94851 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.93e-17 | 121 |
vascular associated smooth muscle cell | 2.98e-14 | 32 |
muscle cell | 1.22e-12 | 55 |
fibroblast | 1.72e-12 | 76 |
smooth muscle cell | 4.42e-12 | 43 |
smooth muscle myoblast | 4.42e-12 | 43 |
muscle precursor cell | 4.92e-12 | 58 |
myoblast | 4.92e-12 | 58 |
multi-potent skeletal muscle stem cell | 4.92e-12 | 58 |
embryonic cell | 9.27e-09 | 250 |
electrically responsive cell | 2.37e-08 | 61 |
electrically active cell | 2.37e-08 | 61 |
cardiocyte | 1.77e-07 | 16 |