FFCP PHASE1:Hg19::chr11:85779860..85779886,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8301 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15514 | |||
|TSSclassifier=strong | |||
|UniProt=E9PJT1 | |||
|association_with_transcript=-21bp_to_ENST00000534412_5end | |||
|description=CAGE_peak_6_at_PICALM_5end | |||
|id=chr11:85779860..85779886,- | |||
|ontology_enrichment_celltype=CL:0000766!7.05e-12!76;CL:0000860!2.72e-11!45;CL:0002057!1.74e-10!42;CL:0000763!1.86e-10!112;CL:0000049!1.86e-10!112;CL:0000359!2.19e-10!32;CL:0000839!1.30e-09!70;CL:0000557!2.25e-09!71;CL:0002009!7.42e-09!65;CL:0002194!8.74e-09!63;CL:0000576!8.74e-09!63;CL:0000040!8.74e-09!63;CL:0000559!8.74e-09!63 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.10e-11;32!CL:0000860;8.82e-10;33!CL:0002057;8.82e-10;33!CL:0002539;7.86e-08;10!CL:0000473;1.42e-07;39!CL:0000234;1.42e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.07e-12,32;CL:0000766,1.02e-11,72;CL:0000763,2.29e-11,108;CL:0000049,2.29e-11,108;CL:0000860,4.86e-11,42;CL:0002057,4.86e-11,42;CL:0000048,4.36e-10,427;CL:0000473,4.87e-10,48;CL:0000234,4.87e-10,48;CL:0000723,2.27e-09,433;CL:0002194,2.64e-09,59;CL:0000576,2.64e-09,59;CL:0000040,2.64e-09,59;CL:0000559,2.64e-09,59;CL:0000839,3.47e-09,66;CL:0002009,1.23e-08,61;CL:0000034,1.82e-08,441;CL:0000557,3.46e-08,67;CL:0000192,5.02e-08,43;CL:0000514,5.02e-08,43;CL:0002539,1.08e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;4.05e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.49e-11!167;UBERON:0001981!1.66e-09!60;UBERON:0007500!1.66e-09!60;UBERON:0004537!1.66e-09!60;UBERON:0006965!1.66e-09!60;UBERON:0001637!3.77e-09!42;UBERON:0003509!3.77e-09!42;UBERON:0004572!3.77e-09!42;UBERON:0003081!6.25e-09!216;UBERON:0002049!1.52e-08!79;UBERON:0007798!1.52e-08!79;UBERON:0000055!1.63e-08!69;UBERON:0004573!3.20e-08!33;UBERON:0004571!3.20e-08!33;UBERON:0004872!5.58e-08!84;UBERON:0001474!1.48e-07!86;UBERON:0004765!2.25e-07!101;UBERON:0001434!2.25e-07!101;UBERON:0002371!2.33e-07!80;UBERON:0004535!7.48e-07!110;UBERON:0001009!7.55e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.37e-10;33!UBERON:0004571;5.37e-10;33!UBERON:0001637;2.76e-08;42!UBERON:0003509;2.76e-08;42!UBERON:0004572;2.76e-08;42!UBERON:0004237;7.86e-08;10!UBERON:0004695;7.86e-08;10!UBERON:0002111;7.86e-08;10!UBERON:0004178;7.86e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,4.72e-12,42;UBERON:0003509,4.72e-12,42;UBERON:0004572,4.72e-12,42;UBERON:0004573,2.46e-11,33;UBERON:0004571,2.46e-11,33;UBERON:0003081,5.27e-11,203;UBERON:0007500,2.21e-10,59;UBERON:0001981,2.21e-10,59;UBERON:0004537,2.21e-10,59;UBERON:0006965,2.21e-10,59;UBERON:0002204,5.02e-10,167;UBERON:0000055,7.67e-09,68;UBERON:0004872,1.12e-08,83;UBERON:0002049,3.08e-08,78;UBERON:0007798,3.08e-08,78;UBERON:0004237,1.08e-07,10;UBERON:0004695,1.08e-07,10;UBERON:0002111,1.08e-07,10;UBERON:0004178,1.08e-07,10;UBERON:0001474,5.07e-07,82 | |||
|phase1_expression=1.2717486548939,3.21150785836475,2.25527046553554,3.00219895059391,1.34088328328186,2.61701557230111,0,0,0,0,0,0,0,0.37129905888014,0.662794751455832,2.01697543935533,4.21886169616784,2.92124036154949,4.39139518911456,0.246242116153576,0.204000691244253,0,0,0.684372125364421,1.00434111675842,0.534893840235659,0.164201178899891,0.393553906568396,1.96682138424452,1.15148819429164,0.77408061658038,0,0,0,0.0774672005803016,0.142169232487422,0.587200878669695,2.21598163412751,3.00816671205213,2.17010870715852,0.223915474239924,0.647787332037959,0.515151135268373,1.45398238779565,2.64513160582167,1.94067248950253,0.697287110717054,1.23350366406548,1.85823822537062,2.3015391385772,3.33008918487831,1.18241114944293,1.72372840368309,2.5819387343353,0,2.07066573496865,0.272906150057846,0.898893937780338,1.53041946185451,0.962787081228281,2.55734850319616,1.64925650093358,2.19410023383795,2.13112375266347,3.77272010217159,1.70215567407342,2.4912889959823,2.76373531782418,3.65038042894141,2.17188844705117,3.02699751316684,2.94622108790052,1.58231193720442,0.633765858935825,1.27562579979026,0.838634582033504,0.786300418025466,1.05123824989054,1.92870704036496,1.14005097496499,0.59675003159727,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0.196709770113833,0.786021525498329,0.616804496998528,0,0,0.473447805734733,0,0.334231370655521,0,0,0,0.25618263945135,0,0,0.552700035571697,0,0,0.267540828089713,1.04535523804977,0.339928028092699,0.383220493601921,0,0.506039384039006,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,0.236777252044017,0,0,1.06976078313403,0.579297615531196,0,0.670700859703636,0.511450247374121,1.80719576192283,1.50401373190767,1.73815822752988,3.9764297352555,0.973269740605272,2.55244006342983,3.76939975686359,4.21606971327005,0.982343066232845,0,0,7.14004266040303,7.13931922926996,6.1160661838678,0,1.14398982156026,0.74291500265913,1.19257444420023,0,0.694281003215189,0.56530794192401,0,0.550236083880135,0.835979866147242,0.258416759169329,1.77883131343355,2.67776490211736,2.41697590265488,0,1.22031028774085,0.367663080345869,0,0.892997282840798,0.673588117878509,0.675668882899933,1.53316637465883,0.949265659568129,0.549605231791222,10.5424333948851,3.87780264148325,0,2.98183171017191,1.13967460498122,2.78059279707759,2.0078563452417,1.06400514659507,0,1.06748995729705,0.49333509683432,0.311211035399766,1.48181739276657,0.817309515567294,0.454072282934794,0.576175924479999,0,0.312160076830321,0.570471821544449,0.597794722207204,0.469737994575059,0.161872944368132,0.140450806702248,0.61246251376468,0.122834317311768,0.206651562351531,0,0.494533858557114,0,0,0,0.625592599359821,0.831192346452549,0.438977620880838,1.83892677479412,0.901428353439581,0.567160915800105,2.33206526395521,0.640672166455702,0.635795703478686,0.900273288253207,0.515262646192195,2.06112432036503,0.930584281657949,4.05063197379039,4.87185025805993,1.00973509697646,0.460249493211497,0.323292113637624,2.4850671476163,3.92933183087797,0.508681776931463,0.193260853163297,0.272746120590835,1.14721838155602,0.609868530647977,0.795178609928912,0.69716365721711,0.207322110030741,0.504641701751257,0.72995471815166,1.56449532329816,3.21620469096443,0,0.464367928031979,0.721879481669586,0.236613600079688,0.337169380156203,0.241011029883482,0,0.217879444092406,0.474541238222193,0.539325232640658,0.588664395376038,0.769494313892781,0,1.40241773803446,0.4115740113314,0,1.26755034821831,0,0.590789906681404,0,0.491953754172454,0.857839051492628,0.548751427043128,0,0.703702806881416,0.0925884451585296,0,0,0,0.811512834825538,3.17003474436719,0.866198686566443,0.925971025153221,0.951270761172991,0,0,0.246217006087397,0,1.0404181360211,1.87467667973554,1.17587489739202,0.850650583454319,0.895585227028483,0.581267877027924,0,4.43396914106349,0.968532774145487,0.621984346622316,0.576479813667846,0.75745460055828,0.063497894292169,0,0,0,0.205654985406647,0.300343057843917,0.571652865261156,0.224262168690721,0,0.22001485746285,0.646358578788889,0,0.845302752556,1.59562869950922,0,0,0,0,0.285955987316295,0,0,1.30294473717494,0.710783897485092,0,0.904318131178758,0,0.99972991182057,0,0.502257091432126,10.5416969741516,2.63587341040741,0,2.85273810081437,7.09428402671138,1.02738161275192,2.32779252211864,0,0.394061520403854,0.646882724578552,0.641715181398742,0.508189248444927,1.30139853857622,0.773288812777695,0.502548796003046,0.637938751653163,8.23907726341901,29.9161459204025,6.21623270154053,0.24538298343828,0,0.271265023699736,1.45579603071565,0.713715955188647,0.315404830067869,0.468565659970853,2.10662269809403,0,1.03473071292505,0.664225598535437,1.29058417979192,0.173767228936166,0.195801157462741,0,0.82707210449155,1.50999940573032,1.38745825144478,0,1.66435439510497,0,4.46594054073798,8.90079445070762,4.49056151092918,2.43464383585832,5.62877973973374,5.14732547659544,0,0.308419387605311,1.42049380250502,1.23190734020714,1.03850885836724,1.16210378459959,0.362578348774867,0.6015194109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| |||
|short_description=p6@PICALM | |||
}} |
Revision as of 09:44, 11 January 2014
Short description: | p6@PICALM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PICALM_5end |
Coexpression cluster: | NA |
Association with transcript: | -21bp_to_ENST00000534412_5end |
EntrezGene: | PICALM |
HGNC: | 15514 |
UniProt: | E9PJT1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.07e-12 | 32 |
myeloid leukocyte | 1.02e-11 | 72 |
myeloid cell | 2.29e-11 | 108 |
common myeloid progenitor | 2.29e-11 | 108 |
classical monocyte | 4.86e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.86e-11 | 42 |
multi fate stem cell | 4.36e-10 | 427 |
defensive cell | 4.87e-10 | 48 |
phagocyte | 4.87e-10 | 48 |
somatic stem cell | 2.27e-09 | 433 |
monopoietic cell | 2.64e-09 | 59 |
monocyte | 2.64e-09 | 59 |
monoblast | 2.64e-09 | 59 |
promonocyte | 2.64e-09 | 59 |
myeloid lineage restricted progenitor cell | 3.47e-09 | 66 |
macrophage dendritic cell progenitor | 1.23e-08 | 61 |
stem cell | 1.82e-08 | 441 |
granulocyte monocyte progenitor cell | 3.46e-08 | 67 |
smooth muscle cell | 5.02e-08 | 43 |
smooth muscle myoblast | 5.02e-08 | 43 |
aortic smooth muscle cell | 1.08e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
artery | 4.72e-12 | 42 |
arterial blood vessel | 4.72e-12 | 42 |
arterial system | 4.72e-12 | 42 |
systemic artery | 2.46e-11 | 33 |
systemic arterial system | 2.46e-11 | 33 |
lateral plate mesoderm | 5.27e-11 | 203 |
epithelial tube open at both ends | 2.21e-10 | 59 |
blood vessel | 2.21e-10 | 59 |
blood vasculature | 2.21e-10 | 59 |
vascular cord | 2.21e-10 | 59 |
musculoskeletal system | 5.02e-10 | 167 |
vessel | 7.67e-09 | 68 |
splanchnic layer of lateral plate mesoderm | 1.12e-08 | 83 |
vasculature | 3.08e-08 | 78 |
vascular system | 3.08e-08 | 78 |
blood vessel smooth muscle | 1.08e-07 | 10 |
arterial system smooth muscle | 1.08e-07 | 10 |
artery smooth muscle tissue | 1.08e-07 | 10 |
aorta smooth muscle tissue | 1.08e-07 | 10 |
bone element | 5.07e-07 | 82 |