FFCP PHASE1:Hg19::chr15:83240783..83240846,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64506 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21744 | |||
|TSSclassifier=weak | |||
|UniProt=Q9BZB8 | |||
|association_with_transcript=-210bp_to_ENST00000398591,ENST00000423133,NM_001079533,NM_001079534,NM_001079535,uc002biq.2,uc002bir.2,uc002bis.2,uc010uod.1_5end | |||
|description=CAGE_peak_1_at_CPEB1_5end | |||
|id=chr15:83240783..83240846,- | |||
|ontology_enrichment_celltype=CL:0000055!2.51e-28!180;CL:0000057!2.26e-12!75;CL:0000680!7.99e-11!57;CL:0000056!7.99e-11!57;CL:0000355!7.99e-11!57;CL:0000187!6.39e-10!54;CL:0000183!1.32e-08!59;CL:0002620!6.35e-08!23;CL:0000192!8.25e-08!42;CL:0000514!8.25e-08!42;CL:0000393!8.73e-08!60;CL:0000211!8.73e-08!60;CL:0002334!9.51e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002334;3.61e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.07e-10,76;CL:0002334,4.44e-09,12;CL:0000680,4.45e-07,58;CL:0000056,4.45e-07,58;CL:0000355,4.45e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.87e-22!57;UBERON:0005068!6.87e-22!57;UBERON:0006241!6.87e-22!57;UBERON:0007135!6.87e-22!57;UBERON:0000955!2.73e-20!69;UBERON:0006238!2.73e-20!69;UBERON:0002616!7.28e-20!59;UBERON:0000073!3.44e-18!94;UBERON:0001016!3.44e-18!94;UBERON:0005743!6.61e-18!86;UBERON:0001017!7.13e-18!82;UBERON:0000475!7.49e-18!365;UBERON:0003080!1.44e-17!42;UBERON:0001893!1.95e-17!34;UBERON:0007023!2.43e-17!115;UBERON:0002780!3.32e-17!41;UBERON:0001890!3.32e-17!41;UBERON:0006240!3.32e-17!41;UBERON:0002020!4.18e-17!34;UBERON:0003528!4.18e-17!34;UBERON:0001869!7.59e-17!32;UBERON:0002791!1.05e-16!33;UBERON:0003075!3.38e-16!86;UBERON:0007284!3.38e-16!86;UBERON:0002346!1.33e-15!90;UBERON:0000153!3.56e-14!129;UBERON:0007811!3.56e-14!129;UBERON:0000033!4.65e-14!123;UBERON:0003056!5.85e-14!61;UBERON:0002619!6.30e-14!22;UBERON:0000956!2.14e-13!25;UBERON:0000203!2.14e-13!25;UBERON:0001950!7.04e-13!20;UBERON:0000914!2.62e-11!83;UBERON:0002329!2.62e-11!83;UBERON:0003077!2.62e-11!83;UBERON:0003059!2.62e-11!83;UBERON:0007282!2.62e-11!83;UBERON:0009618!2.62e-11!83;UBERON:0007285!2.62e-11!83;UBERON:0002385!3.12e-11!63;UBERON:0001015!3.12e-11!63;UBERON:0000383!3.12e-11!63;UBERON:0004290!9.05e-11!70;UBERON:0001134!1.14e-10!61;UBERON:0002036!1.14e-10!61;UBERON:0003082!1.14e-10!61;UBERON:0004121!4.80e-09!169;UBERON:0000924!6.71e-09!173;UBERON:0006601!6.71e-09!173;UBERON:0000486!6.11e-08!82;UBERON:0000468!1.26e-07!659;UBERON:0000481!2.10e-07!347;UBERON:0000483!4.61e-07!309;UBERON:0000119!8.41e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;6.47e-16;34!UBERON:0001869;1.02e-15;32!UBERON:0002619;1.47e-15;22!UBERON:0002791;2.48e-15;32!UBERON:0003528;2.75e-15;34!UBERON:0002020;2.75e-15;34!UBERON:0001950;3.66e-14;20!UBERON:0002780;1.60e-13;41!UBERON:0001890;1.60e-13;41!UBERON:0000073;3.55e-13;53!UBERON:0002616;3.55e-13;53!UBERON:0000956;7.11e-13;25!UBERON:0000203;7.11e-13;25!UBERON:0000955;1.98e-09;68!UBERON:0001017;5.36e-09;75!UBERON:0000200;1.71e-07;6!UBERON:0002420;3.17e-07;9!UBERON:0007245;3.17e-07;9!UBERON:0010009;3.17e-07;9!UBERON:0010011;3.17e-07;9!UBERON:0000454;3.17e-07;9!UBERON:0001016;5.54e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.94e-23,53;UBERON:0002616,5.94e-23,53;UBERON:0001049,6.94e-22,56;UBERON:0005068,6.94e-22,56;UBERON:0006241,6.94e-22,56;UBERON:0007135,6.94e-22,56;UBERON:0000955,2.17e-19,68;UBERON:0006238,2.17e-19,68;UBERON:0001893,2.58e-18,34;UBERON:0002780,4.53e-18,41;UBERON:0001890,4.53e-18,41;UBERON:0003080,4.53e-18,41;UBERON:0006240,4.53e-18,41;UBERON:0003528,6.49e-18,34;UBERON:0002020,6.49e-18,34;UBERON:0001869,1.83e-17,32;UBERON:0002791,5.28e-17,32;UBERON:0002619,1.61e-15,22;UBERON:0003075,1.97e-15,82;UBERON:0007284,1.97e-15,82;UBERON:0001017,2.19e-15,81;UBERON:0007023,5.42e-15,114;UBERON:0001016,2.54e-14,89;UBERON:0001950,4.44e-14,20;UBERON:0002346,5.65e-14,86;UBERON:0000956,7.70e-13,25;UBERON:0000203,7.70e-13,25;UBERON:0003056,3.19e-12,61;UBERON:0010314,3.93e-11,132;UBERON:0010371,4.24e-10,104;UBERON:0000200,1.85e-07,6;UBERON:0002420,2.41e-07,9;UBERON:0007245,2.41e-07,9;UBERON:0010009,2.41e-07,9;UBERON:0010011,2.41e-07,9;UBERON:0000454,2.41e-07,9;UBERON:0004732,9.13e-07,13;UBERON:0002385,9.47e-07,64;UBERON:0001015,9.47e-07,64;UBERON:0000383,9.47e-07,64 | |||
|phase1_expression=4.36028110249336,1.49870366723688,4.79244973926302,2.00146596706261,6.25745532198203,1.74467704820074,0,3.15859936713415,2.08948502559871,0,0,0,0,0.123766352960047,0,0.672325146451775,1.20538905604795,1.46062018077475,0.487932798790507,1.10808952269109,0,0.313454721478088,0.85870796139317,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.639312809217652,2.89151321907653,3.50936537445123,2.75208386025565,10.3387173116643,1.45990461090791,0.472674085820339,0,0.263504357079378,1.17881167947941,0,0,0.324547393654683,0.348259474598534,1.32957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77282716330412,8.34177839123278,4.87622255272983,1.06400514659507,0,0,0.24666754841716,0.311211035399766,0,0,0,0,0.234321431833797,0.312160076830321,1.1409436430889,0.896692083310806,0.704606991862589,1.13311061057692,0.280901613404497,0,0.122834317311768,0.309977343527296,1.18800285728205,3.70900393917835,0.910161361938026,0.718618141816238,0.673344455816265,0.875829639103749,0.554128230968366,6.14568669233173,3.0648779579902,2.55404700141215,0,4.30535125653269,1.49490172172997,0.847727604638247,7.20218630602566,1.13357782162283,3.60696756063881,0.930584281657949,5.73839529620305,3.89748020644795,9.84491719552046,1.56484827691909,2.26304479546337,4.61512470271599,2.82105875037393,1.18692414617341,0,0,0,0.609868530647977,0.530119073285941,0.464775771478074,0.932949495138334,0.504641701751257,0.36497735907583,0,0,1.38134921352481,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.8231480226628,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,1.03993478527958,0,1.27523445472584,0.352226082707465,0,0,0,0,0,0.246217006087397,1.17002132569619,0.594524649154913,0,0,0,0,0,0,0,0,0.414656231081544,0,0.25248486685276,2.22242630022592,2.29193055334967,5.86087236050235,1.71072446022705,0.719792448923265,2.40274446275134,0.857479297891735,0,0,0.1466765716419,2.06834745212444,3.57656445851882,0.845302752556,3.19125739901845,1.04007436911366,1.02882949704857,0,1.3321108950805,0.285955987316295,0,0.823240336780769,0.977208552881205,0,0.791951872933429,2.41151501647669,0.871533458600294,0.099972991182057,0,0,0,1.4377491329495,3.44585807502342,8.5582143024431,1.88215698667853,0.61642896765115,4.83464600747718,0.448340575974109,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0.831883446123229,0.356857977594324,0.473107245101804,0.585707074963566,3.91229929646035,4.5481500811197,1.03473071292505,4.64957918974806,4.79359838208428,2.78027566297865,0.195801157462741,0.343143423810856,0,0,0,0,0,0.30239029332968,3.96972492510043,8.13348458426731,3.08726103876381,8.07276640310916,2.55853624533352,4.66476371316462,0,3.39261326365842,3.19611105563629,6.65229963711854,3.11552657510173,4.41599438147845,0,0,0,2.75554675595056,1.82091168006717,4.327105693661,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0.256450125116389,0,0.650756789328606,0.412164046590889,0.183138929636687,0.495056999523528,0,0.650060246036521,0,5.60690166094307,0.616194468458578,0.921022048356777,0.413509717453592,1.39646318328756,1.59518363305651,0.681813019328807,2.40386496246191,0,0,0,0,1.39453664789186,8.49993336442728,3.485186350803,0.308033580176089,3.19383618190213,2.60979897622522,0.55597265731176,0.572499546967965,0.744316738719335,0.316379424718726,0.571890581771475,1.27948895655667,2.99557291623744,4.77304871888905,1.56989728039846,1.61885211824983,3.0199073270966,1.88499843753098,4.04364963146632,0,3.79132610615083,0,0,0,2.72999822815972,3.39373036688911,4.52032466480971,2.75682671773062,0,2.63070531152258,2.31510213706675,3.27947376023316,0.202910376962704,0.30982349809975,1.69017361519345,0.430234056612155,0.0982490410131212,0,9.22378766583554,1.05553817648832,2.30506425071931,0.379473173765715,0.699869440489966,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,3.97659059106519,4.78276015795743,0.556543525114529,0,0,0.996239941255349,0.552567831062295,0,0.613612095012929,0,2.17727711363265,0,0,0,4.43895325366201,0,0,1.93866549219044,4.08179631912146,3.99227596002388,0,0,2.17499872630438,0,0,0,1.37897349296586,1.45802306691627,2.43074992906609,6.20018970069687,4.22087535188928,4.5774520895125,9.84155413387899,5.31985714116385,3.51016635446356,0,0,3.15496059865568,8.65959624437209,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98104772431402,1.59223616106011,1.22206028986725,0,0,0,1.41542379259422,0.802577647298789,1.63985112007737,0,0,0,0.394584402849391,2.41981432097328,0.91821828489147,0.884612114798832,0.60129367765797,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0,0,0.52418000472609,0,0,0,0,2.42472541221049,0,1.12990370390266,0,0.19871461170299,6.64763357536726,0,0.320635281006135,2.34798294213288,0.19980960958213,0,0,0,0,0.124252535565433,0,0,0.313808538937,0.713987523454252,5.20111061822734,1.20084057741958,1.64286454670392,0,0,0,0,0.229160424011684,0,0.399358000997982,0.429226048136571,0,0.806201669840715,0.720599767084807,0,0,0,0,0.295282444544246,0,3.97614844904652,3.40508515278939,0,0,0,0,0,8.20119014883333,0,0.157611414598396,0.262272940674991,0,0,0,6.4322579373603,0,0,5.97299561929084,0.864221491201268,4.24563568142232,1.19730191562487,0,4.77086460999181,0.226624183040251,0,0,2.58565912723101,1.3223260174269,0,0,0.854299300541557,1.88645166119599,0,0,0,0,0,0,0,0,0,0,5.31640907980192,5.00307686098049,7.01069211956399,1.72022758707021,2.5513681853476,3.47739856471747,2.07522952404346,0,0.151649117541648,2.56918800190471,0,0,0,3.13435086062435,6.54397267572229,6.65767033803136,5.11388114242741,5.0313580350515,9.7879234375619,1.83072054717539,3.02461847526478,3.73049281398673,1.62640664988597,1.75226443880073,5.39763734596325,1.39736661188633,1.65882483136342,2.39257543102195,2.08698024724694,1.05180326298053,2.28483127301277,3.66183659884195,1.45478927362048,0.966695013382396,2.78420255927096,1.19428766609585,0,5.49433128292469,7.74523824161614,0,0,0,0,0.226705925512272,0,0,0,0,0,0.706756583783524,0,0,0,0.345430341731199,0,5.66859588222096,0.194860308839388,0.132864840313363,1.96278473107013,0.327609848846413,0.245772908753719,0,0,0,0,0,8.10066181108099,0,0,0.895260599125562,1.1860729253635,0,1.20130602011215,0.169732529954025,0,0.247871528518004,0,0.636008701306837,0,2.40171224485641,1.05802783107205,0,5.97331793397074,4.25089728976755,4.15048033548593,5.33302547025963,0.504143392443436,6.01668096438696,4.35984243205998,2.85538840518309,0,0,0,0,2.288292572803,0,4.57507310867432,1.50420656698514,1.81534561833168,0,0,0,0,7.5642094772602,3.12431239445539,5.37385670903079,5.51717548686989,0.546974809018219,0,1.98484471355718,0.175871244359621,0,0,0,1.21393120847326,4.55324382702595,0,0,0,5.43757863814654,6.971913997662,0,0.222462803784138,2.59027206406696,1.72827148907602,0,2.73947616152849,0.215927591218621,0,3.78825684136279,0,0,0,2.40513409419076,0.414432328326074,0.17071847709395,0.691259661814092,0,0.354996002191696,0.511280428554946,0.846774100381858,0,0,0,0,0,0,0,0.205325613712494,1.1598144313382,0,0,2.38740930193642,0,0,0.109940516745429,0.905777061400041,0.694567422971502,0.437119121007915,0,3.92237314806249,0,0.981542335574726,1.18818560130834,0.8453114551668,2.71883383500507,0.187967835959707,0.322289439867886,0,0,0,0,0,0.458729283404541,2.15009374727177,0,8.29496180329159,0.436350690340377,0.5290268405154,4.46394021800102,5.0839319149456,4.75889218336168,0.504665699340316,2.4038425832013,0,0.101988829741982,0,0,0,1.28823786971007,0.535928260312357,0.829169439458779,2.48239190068549,1.0661699095049,1.1903221573187,0.0645889098360061,0.186224142887574,0.897054900644907,0.12729431655633,0.202117188958219,0,0,0.134704106029175,0.215166616178029,0.99798106963804,0,0.106727345877715,7.7228912914776,0,7.03922827210363,2.93379466038879,0.406896178315738,0.665756774185513,0.201273793591026,0 | |||
|short_description=p1@CPEB1 | |||
}} |
Revision as of 00:54, 12 January 2014
Short description: | p1@CPEB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CPEB1_5end |
Coexpression cluster: | NA |
Association with transcript: | -210bp_to_ENST00000398591, ENST00000423133, NM_001079533, NM_001079534, NM_001079535, uc002biq.2, uc002bir.2, uc002bis.2, uc010uod.1_5end |
EntrezGene: | CPEB1 |
HGNC: | 21744 |
UniProt: | Q9BZB8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.07e-10 | 76 |
preadipocyte | 4.44e-09 | 12 |
muscle precursor cell | 4.45e-07 | 58 |
myoblast | 4.45e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.45e-07 | 58 |