FFCP PHASE1:Hg19::chr17:42429493..42429515,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C587 | |||
|description=CAGE_peak_at_chr17:42429493..42429515,+ | |||
|id=chr17:42429493..42429515,+ | |||
|ontology_enrichment_celltype=CL:0002009!5.83e-20!65;CL:0000557!9.43e-20!71;CL:0002194!1.06e-19!63;CL:0000576!1.06e-19!63;CL:0000040!1.06e-19!63;CL:0000559!1.06e-19!63;CL:0000839!1.60e-19!70;CL:0002057!9.40e-19!42;CL:0000766!1.42e-17!76;CL:0000860!1.85e-17!45;CL:0000763!2.05e-08!112;CL:0000049!2.05e-08!112;CL:0000063!4.25e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.48e-30;33!CL:0002057;6.48e-30;33!CL:0000473;7.31e-29;39!CL:0000234;7.31e-29;39!CL:0000576;5.67e-20;48!CL:0000766;1.39e-13;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.74e-34,48;CL:0000234,8.74e-34,48;CL:0002194,5.27e-33,59;CL:0000576,5.27e-33,59;CL:0000040,5.27e-33,59;CL:0000559,5.27e-33,59;CL:0002009,7.68e-33,61;CL:0000557,1.60e-31,67;CL:0000839,8.03e-31,66;CL:0000860,6.85e-29,42;CL:0002057,6.85e-29,42;CL:0000766,1.39e-26,72;CL:0000763,1.68e-14,108;CL:0000049,1.68e-14,108;CL:0002031,1.48e-09,120;CL:0002087,4.16e-09,115;CL:0000738,1.38e-07,136;CL:0002320,3.27e-07,361;CL:0000134,6.39e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;2.40e-21;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.49e-16!80;UBERON:0001474!4.40e-15!86;UBERON:0002405!1.60e-14!115;UBERON:0002193!2.32e-13!112;UBERON:0002390!3.22e-13!102;UBERON:0003061!3.22e-13!102;UBERON:0004765!3.85e-13!101;UBERON:0001434!3.85e-13!101;UBERON:0000926!1.97e-11!448;UBERON:0004120!1.97e-11!448;UBERON:0006603!1.97e-11!448;UBERON:0003081!1.39e-09!216;UBERON:0002204!5.97e-09!167;UBERON:0000468!1.57e-07!659 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.25e-28,76;UBERON:0001474,3.20e-25,82;UBERON:0002405,2.63e-23,93;UBERON:0004765,3.00e-22,90;UBERON:0002390,2.18e-21,98;UBERON:0003061,2.18e-21,98;UBERON:0002193,2.43e-21,108;UBERON:0001434,4.76e-21,100;UBERON:0003081,6.68e-17,203;UBERON:0000926,1.41e-15,315;UBERON:0004120,1.41e-15,315;UBERON:0006603,1.41e-15,315;UBERON:0002204,9.24e-12,167;UBERON:0002384,6.69e-07,371 | |||
|phase1_expression=2.72517568905835,2.5692062866918,1.69145284915165,1.0007329835313,4.02264984984559,0,0,1.26343974685366,0.261185628199839,0,2.09340350391728,0.873765488520689,0.791300934685361,0.618831764800233,0,3.36162573225888,0,2.92124036154949,0.975865597581014,0.123121058076788,0.612002073732759,0.626909442956176,0,0.273748850145768,0.125542639594803,0.305653622991805,0.410502947249729,0.157421562627358,0.393364276848904,0.383829398097213,0.928896739896456,0.919421224478927,0.30120591877825,1.47901604066715,0.154934401160603,0.426507697462265,0,0,0.802177789880567,1.08505435357926,8.06095707263728,10.3645973126073,5.92423805558629,8.14230137165562,5.66813915533214,8.00527401919793,10.2268776238501,7.40102198439286,4.95530193432166,4.60307827715441,4.61089271752381,5.20260905754887,2.75796544589295,3.22742341791913,2.70852973188684,11.2945403725563,10.9162460023138,10.1125568000288,6.42776173978895,3.85114832491312,3.19668562899521,4.94776950280074,10.7710375115681,5.54092175692502,5.80418477257168,6.80862269629368,3.73693349397345,6.78371396193207,4.69334626578181,3.25783267057675,8.47559303686716,2.94622108790052,6.32924774881769,3.16882929467913,2.12604299965044,0.419317291016752,3.59451619668784,1.95229960693958,3.05378614724452,0,1.19350006319454,0.182664153764634,0,0,0,0,0,0.574752439954483,0.661044872784862,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0.501559486172034,0,0,0,0.334231370655521,0,0,0,0.640456598628376,0.390178042679635,0.493313713811028,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,1.34140171940727,0.383587685530591,0,0.50133791063589,1.73815822752988,0,0.486634870302636,0.283604451492204,1.10864698731282,0.351339142772504,0.130979075497713,0.364295288292542,1.48313777113772,2.27183175558278,1.56716763569341,2.92507513141503,0.715471872916026,0.571994910780128,1.85728750664782,0,0,1.38856200643038,0.56530794192401,0.838998872419812,1.37559020970034,0.208994966536811,1.29208379584664,1.77883131343355,1.00416183829401,2.81980521976403,0,5.12530320851156,0,3.24056779152704,0.357198913136319,0,0.112611480483322,0,0,0.183201743930407,0,0,0.872188104285069,0.993943903390637,0.506522046658319,0.926864265692532,8.60509862246441,1.06400514659507,0,0,2.96001058100592,0,0.404132016209064,0,0.151357427644931,0.576175924479999,0.234321431833797,0.624320153660641,1.1409436430889,1.34503812496621,0.117434498643765,0.323745888736263,0,0,0.122834317311768,0.516628905878827,3.56400857184616,4.69807165629258,0,0,0.168336113954066,0,0,0.438977620880838,0.612975591598039,1.80285670687916,0,0.179389635688862,0.427114777637135,0,0,0.309157587715317,1.03056216018252,0,0.506328996723799,0.389748020644795,0.757301322732344,0.644349290496095,1.2931684545505,0.355009592516614,0.302256294682921,0.169560592310488,2.31913023795956,0.818238361772504,0.573609190778008,0.243947412259191,0.265059536642971,0.580969714347592,0,1.00928340350251,0.36497735907583,0,1.92972281457866,1.38134921352481,0,0.721879481669586,0.946454400318751,0.842923450390509,1.20505514941741,1.43382164552112,0.871517776369625,0.474541238222193,1.48314438976181,0.392442930250692,0.38474715694639,1.4763109092493,0,0.4115740113314,1.47008711385542,0,1.96565443335525,1.18157981336281,0,0.614942192715568,0.514703430895577,2.96325770603289,0,0.301586917234893,0.370353780634118,0.651616610620649,0,0,0.231860809950154,0,0.721832238805369,0.462985512576611,1.14152491340759,2.37061319387782,0.858486162094873,2.46217006087397,1.17002132569619,1.78357394746474,0,0.503946384596579,0.567100388969546,0.358234090811393,0,0.383382679165211,1.47798971368783,1.23267807618516,0.621984346622316,0.576479813667846,1.00993946741104,0.317489471460845,4.58386110669933,2.34434894420094,1.71072446022705,0.925447434329912,0.901029173531752,1.71495859578347,0.224262168690721,0,0.07333828582095,1.29271715757778,3.57656445851882,1.690605505112,2.12750493267896,3.12022310734098,0,0,0,0.714889968290738,2.17048642156577,0,0,0.355391948742546,0,5.42590878707255,0,2.59929777073348,17.0273292897667,20.0902836572851,23.1917333431335,0.958499421966331,4.59447743336456,0,0.579125226670317,0.410952645100767,0.716243852959582,0.112085143993527,0.197030760201927,0,0,0.508189248444927,0,0,0.167516265334349,0,0.749007023947182,0,0.414415513436035,0.36807447515742,2.50085260529839,0.271265023699736,1.03985430765404,2.14114786556594,1.89242898040722,0.702848489956279,0.300946099727719,40.9333507300773,5.17365356462525,0,0.368738337083406,0.868836144680828,2.15381273209015,1.02943027143257,0.413536052245775,1.50999940573032,0.74709290462411,1.81876542867756,0,1.81434175997808,2.72918588600655,0.767309866440312,3.08726103876381,3.33161788064823,1.02341449813341,1.28683136914886,4.45254199334973,0.462629081407967,1.42049380250502,0.410635780069046,2.07701771673448,1.39452454151951,0.966875596732978,9.42380410425439,4.60404944679482,0.34444334449382,1.63882051206045,4.19598127870157,0.451199612907412,0.308061348417659,0,0,0.527758144464379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| |||
|short_description=p@chr17:42429493..42429515,+ | |||
}} |
Revision as of 15:40, 20 January 2014
Short description: | p@chr17:42429493..42429515, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:42429493..42429515, + |
Coexpression cluster: | C587_Osteoblast_Monocytederived_CD14_Macrophage_leiomyoma_Adipocyte_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 8.74e-34 | 48 |
phagocyte | 8.74e-34 | 48 |
monopoietic cell | 5.27e-33 | 59 |
monocyte | 5.27e-33 | 59 |
monoblast | 5.27e-33 | 59 |
promonocyte | 5.27e-33 | 59 |
macrophage dendritic cell progenitor | 7.68e-33 | 61 |
granulocyte monocyte progenitor cell | 1.60e-31 | 67 |
myeloid lineage restricted progenitor cell | 8.03e-31 | 66 |
classical monocyte | 6.85e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.85e-29 | 42 |
myeloid leukocyte | 1.39e-26 | 72 |
myeloid cell | 1.68e-14 | 108 |
common myeloid progenitor | 1.68e-14 | 108 |
hematopoietic lineage restricted progenitor cell | 1.48e-09 | 120 |
nongranular leukocyte | 4.16e-09 | 115 |
leukocyte | 1.38e-07 | 136 |
connective tissue cell | 3.27e-07 | 361 |
mesenchymal cell | 6.39e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.25e-28 | 76 |
bone element | 3.20e-25 | 82 |
immune system | 2.63e-23 | 93 |
skeletal element | 3.00e-22 | 90 |
hematopoietic system | 2.18e-21 | 98 |
blood island | 2.18e-21 | 98 |
hemolymphoid system | 2.43e-21 | 108 |
skeletal system | 4.76e-21 | 100 |
lateral plate mesoderm | 6.68e-17 | 203 |
mesoderm | 1.41e-15 | 315 |
mesoderm-derived structure | 1.41e-15 | 315 |
presumptive mesoderm | 1.41e-15 | 315 |
musculoskeletal system | 9.24e-12 | 167 |
connective tissue | 6.69e-07 | 371 |