FFCP PHASE1:Hg19::chr2:45795104..45795144,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55133 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25521 | |||
|TSSclassifier=strong | |||
|UniProt=B7Z6X7 | |||
|association_with_transcript=9bp_to_ENST00000535761,uc010yoc.1_5end | |||
|coexpression_cluster_id=C299 | |||
|description=CAGE_peak_2_at_SRBD1_5end | |||
|id=chr2:45795104..45795144,- | |||
|ontology_enrichment_celltype=CL:0000037!6.01e-85!172;CL:0000566!6.01e-85!172;CL:0002032!8.62e-81!165;CL:0000837!8.62e-81!165;CL:0000988!8.16e-79!182;CL:0000738!4.06e-72!140;CL:0002087!5.69e-61!119;CL:0002031!5.70e-61!124;CL:0000763!2.08e-52!112;CL:0000049!2.08e-52!112;CL:0000766!7.08e-41!76;CL:0000557!1.74e-35!71;CL:0000839!8.28e-35!70;CL:0002009!3.06e-34!65;CL:0002194!2.03e-33!63;CL:0000576!2.03e-33!63;CL:0000040!2.03e-33!63;CL:0000559!2.03e-33!63;CL:0002057!2.23e-30!42;CL:0000860!4.64e-27!45;CL:0000542!2.06e-23!53;CL:0000051!2.06e-23!53;CL:0000838!4.40e-23!52;CL:0000134!2.66e-15!358;CL:0002320!1.93e-14!365;CL:0000084!1.54e-13!25;CL:0000827!1.54e-13!25;CL:0000791!8.89e-12!18;CL:0000789!8.89e-12!18;CL:0002420!8.89e-12!18;CL:0002419!8.89e-12!18;CL:0000790!8.89e-12!18;CL:0000219!1.24e-10!390;CL:0000945!3.33e-09!24;CL:0000826!3.33e-09!24;CL:0002393!1.14e-08!9;CL:0002397!1.14e-08!9;CL:0000094!4.87e-08!8;CL:0000625!8.03e-08!11;CL:0000048!2.68e-07!430;CL:0000034!3.53e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.80e-30;33!CL:0002057;2.80e-30;33!CL:0000473;3.71e-29;39!CL:0000234;3.71e-29;39!CL:0000576;7.27e-29;48!CL:0000766;3.75e-24;69!CL:0002087;5.49e-19;104!CL:0000763;5.80e-19;100!CL:0000738;5.43e-17;136!CL:0000084;2.63e-15;25!CL:0000988;2.95e-15;177!CL:0000791;6.46e-15;18!CL:0000789;6.46e-15;18!CL:0002419;6.46e-15;18!CL:0000542;4.38e-11;53!CL:0000094;6.49e-11;8!CL:0000625;9.83e-11;11!CL:0002393;6.56e-08;6!CL:0002397;6.56e-08;6!CL:0000081;2.28e-07;11!CL:0000219;2.66e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.08e-88,168;CL:0002032,1.61e-82,161;CL:0000837,1.61e-82,161;CL:0000988,5.72e-82,177;CL:0000738,3.32e-79,136;CL:0002087,2.37e-69,115;CL:0002031,5.05e-65,120;CL:0000763,6.19e-62,108;CL:0000049,6.19e-62,108;CL:0000766,5.96e-59,72;CL:0002194,3.32e-50,59;CL:0000576,3.32e-50,59;CL:0000040,3.32e-50,59;CL:0000559,3.32e-50,59;CL:0002009,9.61e-50,61;CL:0000557,2.21e-49,67;CL:0000473,3.59e-48,48;CL:0000234,3.59e-48,48;CL:0000839,5.20e-47,66;CL:0000860,7.66e-44,42;CL:0002057,7.66e-44,42;CL:0000134,1.66e-22,354;CL:0002320,2.15e-21,361;CL:0000838,8.50e-18,52;CL:0000219,1.61e-17,386;CL:0000542,2.94e-17,53;CL:0000051,2.94e-17,53;CL:0000084,2.68e-15,25;CL:0000827,2.68e-15,25;CL:0000791,6.60e-15,18;CL:0000789,6.60e-15,18;CL:0002420,6.60e-15,18;CL:0002419,6.60e-15,18;CL:0000790,6.60e-15,18;CL:0000034,3.73e-13,441;CL:0000048,6.57e-13,427;CL:0000723,2.74e-12,433;CL:0002393,5.69e-12,9;CL:0002397,5.69e-12,9;CL:0000094,4.77e-11,8;CL:0000625,9.90e-11,11;CL:0000081,1.85e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.07e-31;42!CL:0000049;1.95e-18;108!CL:0000790;6.46e-15;18!CL:0000051;4.38e-11;53 | |||
|ontology_enrichment_disease=DOID:2531!1.92e-13!51;DOID:0060083!1.92e-13!51;DOID:1240!2.01e-13!39;DOID:8692!1.21e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.94e-08;39!DOID:8692;1.99e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.03e-09,39;DOID:2531,3.25e-08,51;DOID:0060083,3.25e-08,51;DOID:8692,1.78e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.30e-42!102;UBERON:0003061!4.30e-42!102;UBERON:0002193!1.76e-40!112;UBERON:0002371!3.46e-31!80;UBERON:0001474!4.07e-27!86;UBERON:0002405!6.31e-24!115;UBERON:0004765!7.03e-20!101;UBERON:0001434!7.03e-20!101;UBERON:0002384!3.07e-13!375;UBERON:0003081!9.72e-09!216;UBERON:0000178!8.28e-08!15;UBERON:0000179!8.28e-08!15;UBERON:0000463!8.28e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.85e-11;15!UBERON:0000179;1.85e-11;15!UBERON:0000463;1.85e-11;15!UBERON:0002390;4.33e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.85e-59,98;UBERON:0003061,4.85e-59,98;UBERON:0002193,4.86e-54,108;UBERON:0002371,9.23e-45,76;UBERON:0002405,6.35e-43,93;UBERON:0001474,5.46e-40,82;UBERON:0004765,1.23e-34,90;UBERON:0001434,3.46e-29,100;UBERON:0002384,1.96e-20,371;UBERON:0003081,1.74e-16,203;UBERON:0000178,1.65e-11,15;UBERON:0000179,1.65e-11,15;UBERON:0000463,1.65e-11,15;UBERON:0002204,6.69e-11,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37544130346312,1.31360943119913,1.10195093839151,3.93364276848904,4.98978217526377,3.8704030829019,0,0,0,2.24654881682875,0.426507697462265,10.8632162553893,3.32397245119126,2.80762226458198,2.17010870715852,2.68698569087909,4.21061765824673,2.06060454107349,6.10672602874172,4.1566353805769,4.36651310138069,3.95129362739664,2.46700732813095,1.23882548358041,6.90461741573161,5.37937483711111,4.96612682766029,6.20542225325913,3.22742341791913,1.35426486594342,4.51781614902251,2.18324920046277,4.04502272001152,7.03992952453076,1.28371610830437,3.83602275479425,4.94776950280074,3.39088217956774,6.39337125799041,5.80418477257168,2.26954089876456,2.4912889959823,4.01997864410789,3.12889751052121,4.77815458351257,4.23779651843358,2.94622108790052,7.27863491114034,17.5341887638912,22.7486600962597,12.7891773760109,6.40273197535022,5.55654503513573,5.46466994770072,31.6364145552786,31.2299183202571,22.6503550668146,1.75996244461323,1.63841583378639,2.66852776159066,2.13365111283254,0.400395987036012,3.4485146397269,0.661044872784862,0.954053754535364,0.569212969109448,0.587237189370939,1.52909291250092,3.96513985737078,6.1655941927969,7.37475437370216,2.55722701147983,0.786021525498329,1.85041349099558,4.84840836632966,3.58514493296949,8.04861269749047,1.94826728407911,10.5839934040915,5.30290633454707,3.76607620792156,5.41607727530031,3.45846563259323,4.29195846947598,5.09757504271396,4.97430032014527,6.37566788617116,5.04174314751005,4.54819407752512,6.27213142829861,4.87230173599535,5.3650869104269,6.8725489096526,6.57851199250707,5.41561204350964,1.95325036156926,3.8018081777935,3.312652619711,2.55973222308837,3.74792179657038,3.55165878066025,8.21127996921047,3.02410114837099,1.06976078313403,1.59306844271079,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,2.92092654289215,4.87563264437948,5.58423434179234,2.14641561874808,1.14398982156026,4.08603251462521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0.446498641420399,0,0.112611480483322,0,0,0,5.27121669744253,46.533631697799,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577465791044295,0.462985512576611,0.761016608938393,0,0,1.23108503043699,4.44608103764552,1.93220510975347,0,0,0,0,0,0.383382679165211,9.36060152002293,3.34584049250259,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,1.00451418286425,2.10833939483032,0,0,0,0,0,0,4.03506518376698,3.94061520403854,3.66566877261179,2.82354679815446,0,0,0,0,0,33.7053160776232,29.9161459204025,23.621684265854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,4.34212854858063,5.82428342210265,3.20182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0.657779629937804,0.522870902049801,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0.974853958525138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,11.1638474031077,4.58782324285425,7.97506062043828,5.95579438644473,8.63860773481008,9.07862635669804,8.64050299580984,7.13812658664843,0,0,0,0.743212700502875,11.9743446770449,1.35169502361987,2.07254154547469,6.98527800014858,5.745161103971,10.5836791361941,2.27235358192189,17.6902222211479,1.14117339516596,6.11051593514791,2.50634477090067,5.2480451118497,0.642352300414798,0,0.851692475380653,5.15258017133647,0.307240764308458,0.447352215784832,1.00109485027145,1.56310476321632,0.835218521685727,3.69262196843137,0.270455678475983,0,8.45922030527097,0,1.02555725490326,0,0.445773537109913,0,0,0.593929361665277,0,0.994147647766298,0.281338832821026,0.222617410045812,0,0,0.19924798825107,1.65770349318689,0,0,0.246169610922139,0,0,0,0.511572370226872,0.789147245095469,4.7896618469388,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,1.52581736317083,0.110579259931225,0.295547618953547,0,0,0,0.769502585037971,0,0,0,0,0,0.0915975934018623,0,12.2631957834884,0,2.99181027420282,0,0,0.167821586975843,0,4.76809736941136,0,0,0,0,0,0.442287822516696,0,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,0.52418000472609,0.51595809741485,0,0,0,0.290967049465258,0,0,0.137041924646751,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0.410716136675979,1.27746588066972,0.429765441419957,0.525774708558629,0,0,0.717873024576814,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0.423366660328922,0.795229689809303,0,0,0,0,1.5748172408605,0.77380195455795,0,0,0.236417121897595,0.104909176269996,0.316801009558219,0,0,0,0,0,0,0,0,0,4.35090359971497,0,0,0.146552233678082,0,0.129282956361551,0,0,0,1.60181118851542,0.628817220398664,6.21358583020793,1.9846640872478,0,0.365377795142688,0,0,0,0,0,0,0,0,0,1.14681839138014,0.443716206147409,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31143796488764,0,0.260994291965212,0,0,4.89473409012935,0,0,0,0,0,0.506827321959218,0,0,0,0,0.389720617678777,0.664324201566815,1.96278473107013,0,0,0,2.99981093782395,0.746842107858986,1.54993481694734,0,0,0,0,0,0,0,0,0,0,1.61116493536703,0,0,0,0,0,0,0.0642292250964595,0,0.638535436228605,0,0,0,0.161475645631851,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0.327543835020193,0,0.0675375846183947,0,0,0.19024743058172,0,0,0,0.351742488719241,0,1.07140367175657,0,0,0,0.266107110487916,0.576169937778896,0,0,0,0,0,0.313972371402056,0.314231179832004,0,0,0,0,0.428859265059938,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0.301925687133347,2.70109553377806,0.655678681511872,0,0,0,0.785233868459781,0.594092800654172,0,0,4.0413084731337,1.67590508731301,0.0999411559249289,0,0,0,0,0.917458566809082,0.573358332605805,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0.26721740526556,0.0918948995348449,0.250707539292375,0.0757786982182394,0.267964130156178,0,0,0.852935927603924,0,2.77732312294826,0.993195428733726,0,0.25458863311266,0.404234377916439,0,0,1.14498490124799,0.717222053926764,0,0.0814032686109745,0.320182037633146,0,0,0,0.366724332548599,0,0,2.01273793591026,0.320568492303233 | |||
|short_description=p2@SRBD1 | |||
}} |
Revision as of 02:55, 21 January 2014
Short description: | p2@SRBD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SRBD1_5end |
Coexpression cluster: | C299_CD14CD16_Eosinophils_Neutrophils_CD14_Whole_Basophils_blood |
Association with transcript: | 9bp_to_ENST00000535761, uc010yoc.1_5end |
EntrezGene: | SRBD1 |
HGNC: | 25521 |
UniProt: | B7Z6X7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.85e-59 | 98 |
blood island | 4.85e-59 | 98 |
hemolymphoid system | 4.86e-54 | 108 |
bone marrow | 9.23e-45 | 76 |
immune system | 6.35e-43 | 93 |
bone element | 5.46e-40 | 82 |
skeletal element | 1.23e-34 | 90 |
skeletal system | 3.46e-29 | 100 |
connective tissue | 1.96e-20 | 371 |
lateral plate mesoderm | 1.74e-16 | 203 |
blood | 1.65e-11 | 15 |
haemolymphatic fluid | 1.65e-11 | 15 |
organism substance | 1.65e-11 | 15 |
musculoskeletal system | 6.69e-11 | 167 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.03e-09 | 39 |
hematologic cancer | 3.25e-08 | 51 |
immune system cancer | 3.25e-08 | 51 |
myeloid leukemia | 1.78e-07 | 31 |