FFCP PHASE1:Hg19::chr2:171673383..171673411,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2571 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4092 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-10bp_to_ENST00000344257_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_GAD1_5end | |||
|id=chr2:171673383..171673411,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.50e-11!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.44e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.63e-09;82 | |||
|ontology_enrichment_disease=DOID:0050687!1.30e-18!143;DOID:305!1.63e-18!106;DOID:14566!1.71e-17!239;DOID:162!3.58e-17!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.71e-19,106;DOID:162,8.64e-17,235;DOID:0050687,1.01e-16,143;DOID:14566,1.42e-16,239 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.42e-27!57;UBERON:0005068!2.42e-27!57;UBERON:0006241!2.42e-27!57;UBERON:0007135!2.42e-27!57;UBERON:0001017!3.65e-27!82;UBERON:0005743!2.73e-26!86;UBERON:0000073!5.33e-24!94;UBERON:0001016!5.33e-24!94;UBERON:0000955!1.15e-22!69;UBERON:0006238!1.15e-22!69;UBERON:0002780!1.73e-22!41;UBERON:0001890!1.73e-22!41;UBERON:0006240!1.73e-22!41;UBERON:0003080!2.41e-22!42;UBERON:0002616!5.93e-21!59;UBERON:0001893!4.22e-19!34;UBERON:0002020!4.90e-19!34;UBERON:0003528!4.90e-19!34;UBERON:0002791!2.19e-18!33;UBERON:0001869!2.54e-18!32;UBERON:0003075!1.00e-17!86;UBERON:0007284!1.00e-17!86;UBERON:0002346!5.24e-17!90;UBERON:0003056!6.79e-15!61;UBERON:0002619!1.13e-14!22;UBERON:0000956!1.21e-13!25;UBERON:0000203!1.21e-13!25;UBERON:0001950!1.86e-13!20;UBERON:0007023!3.45e-13!115;UBERON:0004121!4.41e-13!169;UBERON:0000033!7.96e-13!123;UBERON:0000924!7.98e-13!173;UBERON:0006601!7.98e-13!173;UBERON:0000153!1.14e-12!129;UBERON:0007811!1.14e-12!129;UBERON:0000064!9.60e-09!219;UBERON:0002420!5.01e-07!9;UBERON:0007245!5.01e-07!9;UBERON:0010009!5.01e-07!9;UBERON:0010011!5.01e-07!9;UBERON:0000454!5.01e-07!9;UBERON:0002308!6.45e-07!9;UBERON:0000125!6.45e-07!9;UBERON:0000062!8.30e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.05e-20;41!UBERON:0001890;2.05e-20;41!UBERON:0001893;3.02e-20;34!UBERON:0001869;4.10e-20;32!UBERON:0003528;5.26e-20;34!UBERON:0002020;5.26e-20;34!UBERON:0002619;8.60e-20;22!UBERON:0002791;1.33e-19;32!UBERON:0000073;8.36e-19;53!UBERON:0002616;8.36e-19;53!UBERON:0001950;3.84e-18;20!UBERON:0000956;2.63e-16;25!UBERON:0000203;2.63e-16;25!UBERON:0001017;4.22e-14;75!UBERON:0000955;8.69e-14;68!UBERON:0001016;1.45e-12;83!UBERON:0002420;6.39e-09;9!UBERON:0007245;6.39e-09;9!UBERON:0010009;6.39e-09;9!UBERON:0010011;6.39e-09;9!UBERON:0000454;6.39e-09;9!UBERON:0000125;8.88e-09;9!UBERON:0002308;8.88e-09;9!UBERON:0009663;3.35e-07;7!UBERON:0000200;4.06e-07;6!UBERON:0001737;8.03e-07;9!UBERON:0001557;8.03e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.32e-34,81;UBERON:0001049,5.85e-34,56;UBERON:0005068,5.85e-34,56;UBERON:0006241,5.85e-34,56;UBERON:0007135,5.85e-34,56;UBERON:0000073,5.50e-32,53;UBERON:0002616,5.50e-32,53;UBERON:0001016,9.29e-31,89;UBERON:0000955,7.48e-29,68;UBERON:0006238,7.48e-29,68;UBERON:0002780,3.44e-28,41;UBERON:0001890,3.44e-28,41;UBERON:0003080,3.44e-28,41;UBERON:0006240,3.44e-28,41;UBERON:0001893,1.32e-23,34;UBERON:0003528,1.61e-23,34;UBERON:0002020,1.61e-23,34;UBERON:0003075,1.08e-22,82;UBERON:0007284,1.08e-22,82;UBERON:0001869,1.53e-22,32;UBERON:0002791,6.35e-22,32;UBERON:0002346,2.13e-21,86;UBERON:0010371,5.78e-20,104;UBERON:0002619,8.93e-20,22;UBERON:0011216,1.43e-19,223;UBERON:0003056,1.79e-19,61;UBERON:0001950,3.99e-18,20;UBERON:0000956,2.71e-16,25;UBERON:0000203,2.71e-16,25;UBERON:0004121,4.31e-15,171;UBERON:0000924,4.31e-15,171;UBERON:0006601,4.31e-15,171;UBERON:0007023,1.08e-12,114;UBERON:0010314,1.49e-10,132;UBERON:0002420,5.88e-09,9;UBERON:0007245,5.88e-09,9;UBERON:0010009,5.88e-09,9;UBERON:0010011,5.88e-09,9;UBERON:0000454,5.88e-09,9;UBERON:0000125,8.26e-09,9;UBERON:0002308,8.26e-09,9;UBERON:0009663,3.08e-07,7;UBERON:0003076,3.44e-07,15;UBERON:0003057,3.44e-07,15;UBERON:0000200,4.13e-07,6;UBERON:0001737,7.40e-07,9;UBERON:0000025,8.22e-07,192 | |||
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| |||
|short_description=p1@GAD1 | |||
}} |
Revision as of 06:33, 21 January 2014
Short description: | p1@GAD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GAD1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -10bp_to_ENST00000344257_5end |
EntrezGene: | GAD1 |
HGNC: | 4092 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.44e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.71e-19 | 106 |
cancer | 8.64e-17 | 235 |
cell type cancer | 1.01e-16 | 143 |
disease of cellular proliferation | 1.42e-16 | 239 |