FFCP PHASE1:Hg19::chr2:217236759..217236798,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57574 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29269 | |||
|TSSclassifier=strong | |||
|UniProt=Q9P2E8 | |||
|association_with_transcript=-9bp_to_ENST00000273067,NM_020814,uc002vgb.2_5end | |||
|description=CAGE_peak_3_at_MARCH4_5end | |||
|id=chr2:217236759..217236798,- | |||
|ontology_enrichment_celltype=CL:0000222!6.56e-29!119;CL:0000220!2.13e-21!246;CL:0002321!3.87e-21!248;CL:0000213!3.77e-19!57;CL:0000215!3.77e-19!57;CL:0000055!9.48e-18!180;CL:0000057!1.33e-13!75;CL:0000076!5.44e-13!62;CL:0000359!5.75e-13!32;CL:0000115!1.58e-12!35;CL:0000192!2.49e-12!42;CL:0000514!2.49e-12!42;CL:0002078!3.44e-12!44;CL:0002139!1.83e-11!24;CL:0000680!8.26e-10!57;CL:0000056!8.26e-10!57;CL:0000355!8.26e-10!57;CL:0000071!8.28e-10!18;CL:0002546!8.28e-10!18;CL:0000077!1.49e-09!19;CL:0000187!4.54e-09!54;CL:0000393!7.49e-09!60;CL:0000211!7.49e-09!60;CL:0000183!7.61e-09!59;CL:1000413!2.61e-08!9;CL:0002620!6.68e-08!23;CL:0000066!7.72e-08!254;CL:0002539!1.52e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.21e-13;36!CL:0000359;1.78e-13;32!CL:0000213;5.90e-13;58!CL:0000215;5.90e-13;58!CL:0002139;2.93e-12;24!CL:0000071;9.03e-11;18!CL:0000077;1.18e-10;19!CL:1000413;1.89e-10;9!CL:0002539;2.06e-09;10!CL:0000192;2.54e-08;43!CL:0000076;1.91e-07;63!CL:0002078;2.20e-07;45!CL:0002544;2.50e-07;6!CL:0002620;9.62e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.78e-26,121;CL:0000213,5.01e-22,58;CL:0000215,5.01e-22,58;CL:0000115,9.18e-15,36;CL:0002321,1.38e-14,250;CL:0000359,5.61e-14,32;CL:0000076,2.59e-13,63;CL:0002139,2.24e-12,24;CL:0002078,4.23e-11,45;CL:0000071,8.12e-11,18;CL:0002546,8.12e-11,18;CL:0000077,1.26e-10,19;CL:1000413,1.46e-10,9;CL:0000057,1.70e-10,76;CL:0000192,1.83e-10,43;CL:0000514,1.83e-10,43;CL:0002539,1.53e-09,10;CL:0000680,1.41e-07,58;CL:0000056,1.41e-07,58;CL:0000355,1.41e-07,58;CL:0002544,1.94e-07,6;CL:0000066,2.57e-07,253;CL:0000187,4.51e-07,55 | |||
|ontology_enrichment_development_v019=CL:0002546;9.03e-11;18!CL:0000514;2.54e-08;43!CL:0000222;2.33e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!5.85e-25!69;UBERON:0002049!3.27e-23!79;UBERON:0007798!3.27e-23!79;UBERON:0001981!6.62e-23!60;UBERON:0007500!6.62e-23!60;UBERON:0004537!6.62e-23!60;UBERON:0006965!6.62e-23!60;UBERON:0000119!1.62e-21!312;UBERON:0001637!1.76e-21!42;UBERON:0003509!1.76e-21!42;UBERON:0004572!1.76e-21!42;UBERON:0000483!2.84e-21!309;UBERON:0004872!7.17e-19!84;UBERON:0004111!1.37e-17!241;UBERON:0000025!2.09e-17!194;UBERON:0003914!8.94e-17!118;UBERON:0004573!1.84e-16!33;UBERON:0004571!1.84e-16!33;UBERON:0000475!1.89e-15!365;UBERON:0004535!1.91e-15!110;UBERON:0001009!2.74e-14!113;UBERON:0000477!4.13e-14!286;UBERON:0000947!1.13e-12!21;UBERON:0010191!1.13e-12!21;UBERON:0000490!1.74e-10!138;UBERON:0000487!2.06e-10!22;UBERON:0000486!2.40e-10!82;UBERON:0001986!8.28e-10!18;UBERON:0004638!8.28e-10!18;UBERON:0004852!8.28e-10!18;UBERON:0000467!1.14e-09!625;UBERON:0000914!1.37e-09!83;UBERON:0002329!1.37e-09!83;UBERON:0003077!1.37e-09!83;UBERON:0003059!1.37e-09!83;UBERON:0007282!1.37e-09!83;UBERON:0009618!1.37e-09!83;UBERON:0007285!1.37e-09!83;UBERON:0000480!1.59e-09!626;UBERON:0005256!8.70e-09!143;UBERON:0006914!9.52e-09!25;UBERON:0003915!2.61e-08!9;UBERON:0004700!2.61e-08!9;UBERON:0001917!2.61e-08!9;UBERON:0000468!2.97e-08!659;UBERON:0001134!3.31e-08!61;UBERON:0002036!3.31e-08!61;UBERON:0003082!3.31e-08!61;UBERON:0004290!4.84e-08!70;UBERON:0002385!7.67e-08!63;UBERON:0001015!7.67e-08!63;UBERON:0000383!7.67e-08!63;UBERON:0004237!1.52e-07!10;UBERON:0004695!1.52e-07!10;UBERON:0002111!1.52e-07!10;UBERON:0004178!1.52e-07!10;UBERON:0002100!1.58e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;9.45e-22;42!UBERON:0003509;9.45e-22;42!UBERON:0004572;9.45e-22;42!UBERON:0004573;3.82e-20;33!UBERON:0004571;3.82e-20;33!UBERON:0000947;1.60e-16;21!UBERON:0010191;1.60e-16;21!UBERON:0007500;1.76e-15;56!UBERON:0001981;1.76e-15;56!UBERON:0004537;1.76e-15;56!UBERON:0000055;3.20e-14;65!UBERON:0003914;5.87e-13;74!UBERON:0000487;5.50e-12;22!UBERON:0004638;9.03e-11;18!UBERON:0001986;9.03e-11;18!UBERON:0004852;9.03e-11;18!UBERON:0003915;1.89e-10;9!UBERON:0004700;1.89e-10;9!UBERON:0001917;1.89e-10;9!UBERON:0002049;2.28e-10;75!UBERON:0007798;2.28e-10;75!UBERON:0006914;8.77e-10;25!UBERON:0004237;2.06e-09;10!UBERON:0004695;2.06e-09;10!UBERON:0002111;2.06e-09;10!UBERON:0004178;2.06e-09;10!UBERON:0000490;2.69e-08;33!UBERON:0000025;1.08e-07;93 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,5.69e-29,42;UBERON:0003509,5.69e-29,42;UBERON:0004572,5.69e-29,42;UBERON:0000055,1.87e-28,68;UBERON:0007500,4.00e-26,59;UBERON:0001981,4.00e-26,59;UBERON:0004537,4.00e-26,59;UBERON:0006965,4.00e-26,59;UBERON:0002049,3.17e-24,78;UBERON:0007798,3.17e-24,78;UBERON:0004573,3.05e-22,33;UBERON:0004571,3.05e-22,33;UBERON:0004872,5.40e-20,83;UBERON:0003914,8.55e-17,117;UBERON:0000947,1.16e-16,21;UBERON:0010191,1.16e-16,21;UBERON:0004535,3.23e-16,109;UBERON:0001009,2.96e-15,112;UBERON:0000025,5.74e-14,192;UBERON:0004111,6.75e-14,240;UBERON:0000483,7.05e-13,306;UBERON:0000119,7.30e-13,309;UBERON:0000487,5.90e-12,22;UBERON:0004638,8.12e-11,18;UBERON:0001986,8.12e-11,18;UBERON:0004852,8.12e-11,18;UBERON:0003915,1.46e-10,9;UBERON:0004700,1.46e-10,9;UBERON:0001917,1.46e-10,9;UBERON:0006914,9.29e-10,25;UBERON:0004237,1.53e-09,10;UBERON:0004695,1.53e-09,10;UBERON:0002111,1.53e-09,10;UBERON:0004178,1.53e-09,10;UBERON:0000490,6.26e-09,148;UBERON:0000486,1.83e-08,83;UBERON:0007503,3.72e-07,78 | |||
|phase1_expression=1.2717486548939,0.856402095563933,1.69145284915165,3.00219895059391,0.446961094427288,0.872338524100369,0,0.631719873426831,0,1.22866968250754,0.697801167972428,1.09220686065086,2.37390280405608,0,0,4.70627602516243,2.41077811209591,6.57279081348636,6.34312638427659,0.492484232307152,0.612002073732759,0,0,0.410623275218653,0.502170558379211,0,0,0,0,0,0,0,3.91567694411725,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.58015173161885,0,0,0.144846518960824,0,0,0,0,0.702678285545008,0.196468613246569,0.364295288292542,0,0,0,0,0,0,0,10.136882775702,8.60234595106124,15.9684630739493,13.5673906061762,10.4874859052476,9.35401342596229,14.0026627579663,11.6287541626198,9.60568909254118,17.0707512509982,0.402829317109147,0,1.22031028774085,2.94130464276695,12.9622711661082,2.94689103337463,0.898117490504679,2.25222960966644,7.66583187329416,4.74632829784064,3.29763139074733,0,0,0,3.47880366186723,7.85109172320394,3.57504788195691,2.29469296599051,2.12801029319014,2.24271040056923,2.1349799145941,3.94668077467456,0.311211035399766,0.404132016209064,0.817309515567294,0,0,1.64025002283658,0,2.2818872861778,0.448346041655403,1.05691048779388,0.161872944368132,0.280901613404497,0.408308342509787,0.859840221182376,0,0,0.741800787835671,3.64064544775211,2.15585442544872,0.168336113954066,0.250237039743928,3.04770527032601,0.877955241761676,1.5324389789951,1.20190447125277,1.24775401476023,8.43131287737651,4.05759038755278,1.05965950579781,5.40163972951924,1.95799805553034,2.57640540045629,2.79175284497385,5.23206629947925,5.65134629934952,4.03894038790583,1.28869858099219,0.161646056818812,6.03516307278244,6.7503905812519,3.05209066158878,2.51239109112286,2.18196896472668,4.58887352622406,0,0.132529768321485,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,8.11971000087113,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0.857839051492628,0.768251997860379,2.24803506515239,1.91005047582099,2.31471112896324,1.3032332212413,0,2.88662684050547,0,1.29149563659404,0.721832238805369,0,1.71228737011138,0,0,0,0,0,1.87467667973554,4.03157107677263,1.98485136139341,0.447792613514241,1.45316969256981,3.4504441124869,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0.102827492703324,0,0,1.79409734952577,0,0.80672114403045,4.13669490424889,0,0,6.91439103120663,5.2003718455683,0.257207374262142,0,0.799266537048298,0.285955987316295,0,0,0,0,0,3.01439377059586,10.4584015032035,5.09862255028491,0,0,0,1.4377491329495,0,0,3.61953266668948,0.205476322550383,1.79060963239896,0,0,0,0,0,1.30139853857622,0,2.17771144934653,1.27587750330633,0,0,0,0,0,0,0.831883446123229,2.67643483195743,1.57702415033935,2.6942525448324,0,0,0,0,1.29058417979192,2.5196248195744,0.195801157462741,0,0,0,0,0,0,0,2.23297027036899,3.52962538562544,1.68396056659844,1.53766979106841,6.14048698880044,7.07757253031873,1.48418066444991,1.3878872442239,0.887808626565635,0.492762936082855,0,0.232420756919918,0,4.81215528727884,0,1.7222167224691,1.82091168006717,0.524497659837696,3.60959690325929,1.23224539367064,1.56869953835371,0,1.16106791782163,15.9226737699255,13.4374027168447,2.37507507712353,12.3381802152231,0.270946437543853,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,1.53870075069834,0.328014645699706,0.650756789328606,0.103041011647722,0,0,7.46545199395024,1.95018073810956,8.03419649220798,0,0,0.15350367472613,0.275673144969061,0,0,0.170453254832202,0.178064071293475,0.165284915360978,2.49847087574638,3.82838137483752,0.10115778085555,2.78907329578371,4.09256050879832,5.5762981612848,3.69640296211307,7.98459045475533,7.82939692867565,7.59829298326072,2.86249773483982,0,0.316379424718726,0.762520775695299,1.535386747868,0,0,1.56989728039846,0.539617372749944,0.274537029736055,0.117812402345686,10.1091240786658,15.8510321173008,2.52755073743389,0.48763373908959,2.43713489631284,5.28250733783777,1.09199929126389,0,1.13008116620243,0,7.29782872765342,8.33056681982149,0.578775534266688,0,4.05820753925408,4.957175969596,3.09865162785466,0.717056761020258,0.687743287091848,6.4200789266625,1.77380532035299,0.211107635297664,0,3.03578539012572,1.04980416073495,1.92444225451024,0,3.26672954583968,0.188287601553558,6.45758059006845,1.68471475667626,2.21715076768338,3.44585100310439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.81926752335391,0,0,0,2.98244294329889,2.53204949538923,0,0,0,0,0,3.27512572210559,0.613612095012929,0,11.5084647434869,0.988551862620595,0,0,0,0,5.55684950723184,2.90799823828566,0.927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,1.77148277162768,2.29133233388275,0,0,0,1.09692698576986,0,0,0,0.797594390929008,0,0,0,0,3.11431817566332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0,0,0,0,0.337005664903385,0,1.40558667435203,0,0.19566461893209,0,0,0,3.67287313956588,0.063186579628488,0,0,0,0.330991955875499,0.313932918407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| |||
|short_description=p3@MARCH4 | |||
}} |
Revision as of 08:30, 21 January 2014
Short description: | p3@MARCH4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MARCH4_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENST00000273067, NM_020814, uc002vgb.2_5end |
EntrezGene: | MARCH4 |
HGNC: | 29269 |
UniProt: | Q9P2E8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.78e-26 | 121 |
lining cell | 5.01e-22 | 58 |
barrier cell | 5.01e-22 | 58 |
endothelial cell | 9.18e-15 | 36 |
embryonic cell | 1.38e-14 | 250 |
vascular associated smooth muscle cell | 5.61e-14 | 32 |
squamous epithelial cell | 2.59e-13 | 63 |
endothelial cell of vascular tree | 2.24e-12 | 24 |
meso-epithelial cell | 4.23e-11 | 45 |
blood vessel endothelial cell | 8.12e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.12e-11 | 18 |
mesothelial cell | 1.26e-10 | 19 |
endothelial cell of artery | 1.46e-10 | 9 |
fibroblast | 1.70e-10 | 76 |
smooth muscle cell | 1.83e-10 | 43 |
smooth muscle myoblast | 1.83e-10 | 43 |
aortic smooth muscle cell | 1.53e-09 | 10 |
muscle precursor cell | 1.41e-07 | 58 |
myoblast | 1.41e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.41e-07 | 58 |
aortic endothelial cell | 1.94e-07 | 6 |
epithelial cell | 2.57e-07 | 253 |
muscle cell | 4.51e-07 | 55 |