FFCP PHASE1:Hg19::chr6:35310395..35310410,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5467 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9235 | |||
|TSSclassifier=strong | |||
|UniProt=F5H830 | |||
|association_with_transcript=0bp_to_ENST00000540939_5end | |||
|description=CAGE_peak_2_at_PPARD_5end | |||
|id=chr6:35310395..35310410,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.00e-14!76;CL:0000055!4.88e-14!180;CL:0002057!5.51e-14!42;CL:0000557!1.59e-12!71;CL:0002009!6.37e-12!65;CL:0000860!9.63e-12!45;CL:0000839!2.51e-11!70;CL:0002194!2.92e-11!63;CL:0000576!2.92e-11!63;CL:0000040!2.92e-11!63;CL:0000559!2.92e-11!63;CL:0000048!2.58e-08!430;CL:0000192!2.58e-08!42;CL:0000514!2.58e-08!42;CL:0000680!2.64e-08!57;CL:0000056!2.64e-08!57;CL:0000355!2.64e-08!57;CL:0000187!8.84e-08!54;CL:0000057!1.02e-07!75;CL:0000183!1.69e-07!59;CL:0000723!2.34e-07!436;CL:0000034!9.80e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.40e-17;33!CL:0002057;2.40e-17;33!CL:0000473;1.23e-16;39!CL:0000234;1.23e-16;39!CL:0000766;1.85e-08;69!CL:0000576;2.37e-07;48!CL:0000192;4.54e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,9.32e-17,48;CL:0000234,9.32e-17,48;CL:0000766,2.48e-16,72;CL:0000860,3.14e-14,42;CL:0002057,3.14e-14,42;CL:0000557,5.50e-14,67;CL:0002009,2.02e-13,61;CL:0002194,1.02e-12,59;CL:0000576,1.02e-12,59;CL:0000040,1.02e-12,59;CL:0000559,1.02e-12,59;CL:0000839,1.27e-12,66;CL:0000048,9.92e-11,427;CL:0000723,1.33e-09,433;CL:0000680,6.30e-09,58;CL:0000056,6.30e-09,58;CL:0000355,6.30e-09,58;CL:0000192,7.41e-09,43;CL:0000514,7.41e-09,43;CL:0000034,8.07e-09,441;CL:0000187,2.19e-08,55;CL:0000057,4.17e-08,76;CL:0002320,7.41e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;4.21e-11;42!CL:0000514;4.54e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.45e-22!167;UBERON:0000467!8.49e-16!625;UBERON:0000480!1.74e-15!626;UBERON:0000468!1.07e-14!659;UBERON:0000062!9.31e-14!511;UBERON:0002050!4.00e-13!605;UBERON:0005423!4.00e-13!605;UBERON:0000923!4.39e-13!604;UBERON:0005291!4.39e-13!604;UBERON:0006598!4.39e-13!604;UBERON:0002532!4.39e-13!604;UBERON:0004765!6.37e-13!101;UBERON:0001434!6.37e-13!101;UBERON:0001474!7.23e-13!86;UBERON:0002371!9.03e-13!80;UBERON:0000922!5.43e-12!612;UBERON:0000914!1.72e-10!83;UBERON:0002329!1.72e-10!83;UBERON:0003077!1.72e-10!83;UBERON:0003059!1.72e-10!83;UBERON:0007282!1.72e-10!83;UBERON:0009618!1.72e-10!83;UBERON:0007285!1.72e-10!83;UBERON:0004290!5.07e-10!70;UBERON:0005256!7.24e-10!143;UBERON:0003081!8.29e-10!216;UBERON:0000479!3.16e-09!787;UBERON:0000926!6.69e-09!448;UBERON:0004120!6.69e-09!448;UBERON:0006603!6.69e-09!448;UBERON:0001134!8.46e-09!61;UBERON:0002036!8.46e-09!61;UBERON:0003082!8.46e-09!61;UBERON:0000486!8.88e-09!82;UBERON:0002385!9.93e-09!63;UBERON:0001015!9.93e-09!63;UBERON:0000383!9.93e-09!63;UBERON:0002405!1.33e-08!115;UBERON:0000475!3.96e-08!365;UBERON:0000483!3.61e-07!309;UBERON:0000119!4.80e-07!312;UBERON:0002390!7.09e-07!102;UBERON:0003061!7.09e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,5.26e-24,167;UBERON:0001474,3.21e-14,82;UBERON:0002371,3.88e-14,76;UBERON:0000926,5.94e-14,315;UBERON:0004120,5.94e-14,315;UBERON:0006603,5.94e-14,315;UBERON:0001434,6.16e-14,100;UBERON:0000923,1.48e-13,560;UBERON:0010316,1.48e-13,560;UBERON:0005291,1.48e-13,560;UBERON:0006598,1.48e-13,560;UBERON:0010317,1.48e-13,560;UBERON:0002532,1.48e-13,560;UBERON:0004765,2.86e-13,90;UBERON:0002050,3.54e-13,564;UBERON:0000479,5.08e-13,773;UBERON:0005423,9.64e-13,581;UBERON:0002329,1.09e-10,71;UBERON:0003059,1.09e-10,71;UBERON:0007282,1.09e-10,71;UBERON:0004290,1.09e-10,71;UBERON:0009618,1.09e-10,71;UBERON:0000922,1.40e-10,592;UBERON:0003077,1.72e-10,72;UBERON:0007285,1.72e-10,72;UBERON:0007524,2.66e-10,73;UBERON:0003081,4.45e-10,203;UBERON:0007503,5.70e-10,78;UBERON:0002405,7.03e-10,93;UBERON:0005256,1.82e-09,122;UBERON:0001134,1.97e-09,62;UBERON:0002036,1.97e-09,62;UBERON:0003082,1.97e-09,62;UBERON:0002385,2.35e-09,64;UBERON:0001015,2.35e-09,64;UBERON:0000383,2.35e-09,64;UBERON:0000486,3.78e-09,83;UBERON:0003104,2.15e-08,160;UBERON:0009142,2.15e-08,160;UBERON:0000483,7.57e-08,306;UBERON:0000119,1.03e-07,309;UBERON:0002390,1.11e-07,98;UBERON:0003061,1.11e-07,98;UBERON:0010314,3.91e-07,132 | |||
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| |||
|short_description=p2@PPARD | |||
}} |
Revision as of 11:34, 22 January 2014
Short description: | p2@PPARD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PPARD_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000540939_5end |
EntrezGene: | PPARD |
HGNC: | 9235 |
UniProt: | F5H830 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 9.32e-17 | 48 |
phagocyte | 9.32e-17 | 48 |
myeloid leukocyte | 2.48e-16 | 72 |
classical monocyte | 3.14e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.14e-14 | 42 |
granulocyte monocyte progenitor cell | 5.50e-14 | 67 |
macrophage dendritic cell progenitor | 2.02e-13 | 61 |
monopoietic cell | 1.02e-12 | 59 |
monocyte | 1.02e-12 | 59 |
monoblast | 1.02e-12 | 59 |
promonocyte | 1.02e-12 | 59 |
myeloid lineage restricted progenitor cell | 1.27e-12 | 66 |
multi fate stem cell | 9.92e-11 | 427 |
somatic stem cell | 1.33e-09 | 433 |
muscle precursor cell | 6.30e-09 | 58 |
myoblast | 6.30e-09 | 58 |
multi-potent skeletal muscle stem cell | 6.30e-09 | 58 |
smooth muscle cell | 7.41e-09 | 43 |
smooth muscle myoblast | 7.41e-09 | 43 |
stem cell | 8.07e-09 | 441 |
muscle cell | 2.19e-08 | 55 |
fibroblast | 4.17e-08 | 76 |
connective tissue cell | 7.41e-07 | 361 |